; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0034237 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0034237
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGlycine--tRNA ligase
Genome locationchr3:5553867..5554454
RNA-Seq ExpressionLag0034237
SyntenyLag0034237
Gene Ontology termsGO:0006426 - glycyl-tRNA aminoacylation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0004820 - glycine-tRNA ligase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
InterPro domainsIPR002310 - Glycine-tRNA ligase, alpha subunit
IPR006194 - Glycine-tRNA synthetase, heterodimeric


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004140508.3 glycine--tRNA ligase, chloroplastic/mitochondrial 2 isoform X1 [Cucumis sativus]5.6e-3857.65Show/hide
Query:  LSRLGDDGAQSLLEKFFISKEWDSLFENSRASRQILGAWGMGWEIWIDGMEITQFTYFQQAGSQQLLPVVVKITYGLERILMLLQ---------------
        LS LG D A   +   F+   W+S          +LGAWG+GWEIW+DGMEITQFTYFQQAGSQQLLPV V+ITYGLERILMLLQ               
Subjt:  LSRLGDDGAQSLLEKFFISKEWDSLFENSRASRQILGAWGMGWEIWIDGMEITQFTYFQQAGSQQLLPVVVKITYGLERILMLLQ---------------

Query:  ---------------------QKPVQKHFNIFEEEPHSLLALGLAIPAYDQVLKASHAFNKLDSRSFIGV
                                VQKHFNIFEEE HSLLALGLAIPAYDQVLKASHAFN LDSR FIGV
Subjt:  ---------------------QKPVQKHFNIFEEEPHSLLALGLAIPAYDQVLKASHAFNKLDSRSFIGV

XP_008459797.1 PREDICTED: glycine--tRNA ligase, chloroplastic/mitochondrial 2 isoform X1 [Cucumis melo]2.1e-3757.06Show/hide
Query:  LSRLGDDGAQSLLEKFFISKEWDSLFENSRASRQILGAWGMGWEIWIDGMEITQFTYFQQAGSQQLLPVVVKITYGLERILMLLQ---------------
        LS LG D A   +   F+   W+S          +LGAWG+GWEIW+DGMEITQFTYFQQAGSQQLLPV V+ITYGLERILMLLQ               
Subjt:  LSRLGDDGAQSLLEKFFISKEWDSLFENSRASRQILGAWGMGWEIWIDGMEITQFTYFQQAGSQQLLPVVVKITYGLERILMLLQ---------------

Query:  ---------------------QKPVQKHFNIFEEEPHSLLALGLAIPAYDQVLKASHAFNKLDSRSFIGV
                                VQKHF+IFEEE HSLLALGLAIPAYDQVLKASHAFN LDSR FIGV
Subjt:  ---------------------QKPVQKHFNIFEEEPHSLLALGLAIPAYDQVLKASHAFNKLDSRSFIGV

XP_016902503.1 PREDICTED: glycine--tRNA ligase, chloroplastic/mitochondrial 2 isoform X2 [Cucumis melo]2.1e-3757.06Show/hide
Query:  LSRLGDDGAQSLLEKFFISKEWDSLFENSRASRQILGAWGMGWEIWIDGMEITQFTYFQQAGSQQLLPVVVKITYGLERILMLLQ---------------
        LS LG D A   +   F+   W+S          +LGAWG+GWEIW+DGMEITQFTYFQQAGSQQLLPV V+ITYGLERILMLLQ               
Subjt:  LSRLGDDGAQSLLEKFFISKEWDSLFENSRASRQILGAWGMGWEIWIDGMEITQFTYFQQAGSQQLLPVVVKITYGLERILMLLQ---------------

Query:  ---------------------QKPVQKHFNIFEEEPHSLLALGLAIPAYDQVLKASHAFNKLDSRSFIGV
                                VQKHF+IFEEE HSLLALGLAIPAYDQVLKASHAFN LDSR FIGV
Subjt:  ---------------------QKPVQKHFNIFEEEPHSLLALGLAIPAYDQVLKASHAFNKLDSRSFIGV

XP_022156971.1 glycine--tRNA ligase, chloroplastic/mitochondrial 2 isoform X1 [Momordica charantia]7.3e-3857.06Show/hide
Query:  LSRLGDDGAQSLLEKFFISKEWDSLFENSRASRQILGAWGMGWEIWIDGMEITQFTYFQQAGSQQLLPVVVKITYGLERILMLLQ---------------
        LS LG D A   +   F+   W+S          +LGAWG+GWEIW+DGMEITQFTYFQQAGSQQLLP+ V+ITYGLERILMLLQ               
Subjt:  LSRLGDDGAQSLLEKFFISKEWDSLFENSRASRQILGAWGMGWEIWIDGMEITQFTYFQQAGSQQLLPVVVKITYGLERILMLLQ---------------

Query:  ---------------------QKPVQKHFNIFEEEPHSLLALGLAIPAYDQVLKASHAFNKLDSRSFIGV
                                VQKHFNIFEEE HSLLALGLAIPAYDQVLKASHAFN LDSR FIGV
Subjt:  ---------------------QKPVQKHFNIFEEEPHSLLALGLAIPAYDQVLKASHAFNKLDSRSFIGV

XP_038874261.1 glycine--tRNA ligase, chloroplastic/mitochondrial 2 isoform X1 [Benincasa hispida]2.1e-3757.06Show/hide
Query:  LSRLGDDGAQSLLEKFFISKEWDSLFENSRASRQILGAWGMGWEIWIDGMEITQFTYFQQAGSQQLLPVVVKITYGLERILMLLQ---------------
        LS LG D A   +   F+   W+S          +LGAWG+GWEIW+DGMEITQFTYFQQAGSQQLLPV V+ITYGLERILMLLQ               
Subjt:  LSRLGDDGAQSLLEKFFISKEWDSLFENSRASRQILGAWGMGWEIWIDGMEITQFTYFQQAGSQQLLPVVVKITYGLERILMLLQ---------------

Query:  ---------------------QKPVQKHFNIFEEEPHSLLALGLAIPAYDQVLKASHAFNKLDSRSFIGV
                                VQKHF+IFEEE HSLLALGLAIPAYDQVLKASHAFN LDSR FIGV
Subjt:  ---------------------QKPVQKHFNIFEEEPHSLLALGLAIPAYDQVLKASHAFNKLDSRSFIGV

TrEMBL top hitse value%identityAlignment
A0A0A0KFM2 Glycine--tRNA ligase2.7e-3857.65Show/hide
Query:  LSRLGDDGAQSLLEKFFISKEWDSLFENSRASRQILGAWGMGWEIWIDGMEITQFTYFQQAGSQQLLPVVVKITYGLERILMLLQ---------------
        LS LG D A   +   F+   W+S          +LGAWG+GWEIW+DGMEITQFTYFQQAGSQQLLPV V+ITYGLERILMLLQ               
Subjt:  LSRLGDDGAQSLLEKFFISKEWDSLFENSRASRQILGAWGMGWEIWIDGMEITQFTYFQQAGSQQLLPVVVKITYGLERILMLLQ---------------

Query:  ---------------------QKPVQKHFNIFEEEPHSLLALGLAIPAYDQVLKASHAFNKLDSRSFIGV
                                VQKHFNIFEEE HSLLALGLAIPAYDQVLKASHAFN LDSR FIGV
Subjt:  ---------------------QKPVQKHFNIFEEEPHSLLALGLAIPAYDQVLKASHAFNKLDSRSFIGV

A0A1S3CB07 Glycine--tRNA ligase1.0e-3757.06Show/hide
Query:  LSRLGDDGAQSLLEKFFISKEWDSLFENSRASRQILGAWGMGWEIWIDGMEITQFTYFQQAGSQQLLPVVVKITYGLERILMLLQ---------------
        LS LG D A   +   F+   W+S          +LGAWG+GWEIW+DGMEITQFTYFQQAGSQQLLPV V+ITYGLERILMLLQ               
Subjt:  LSRLGDDGAQSLLEKFFISKEWDSLFENSRASRQILGAWGMGWEIWIDGMEITQFTYFQQAGSQQLLPVVVKITYGLERILMLLQ---------------

Query:  ---------------------QKPVQKHFNIFEEEPHSLLALGLAIPAYDQVLKASHAFNKLDSRSFIGV
                                VQKHF+IFEEE HSLLALGLAIPAYDQVLKASHAFN LDSR FIGV
Subjt:  ---------------------QKPVQKHFNIFEEEPHSLLALGLAIPAYDQVLKASHAFNKLDSRSFIGV

A0A1S4E2Q4 Glycine--tRNA ligase1.0e-3757.06Show/hide
Query:  LSRLGDDGAQSLLEKFFISKEWDSLFENSRASRQILGAWGMGWEIWIDGMEITQFTYFQQAGSQQLLPVVVKITYGLERILMLLQ---------------
        LS LG D A   +   F+   W+S          +LGAWG+GWEIW+DGMEITQFTYFQQAGSQQLLPV V+ITYGLERILMLLQ               
Subjt:  LSRLGDDGAQSLLEKFFISKEWDSLFENSRASRQILGAWGMGWEIWIDGMEITQFTYFQQAGSQQLLPVVVKITYGLERILMLLQ---------------

Query:  ---------------------QKPVQKHFNIFEEEPHSLLALGLAIPAYDQVLKASHAFNKLDSRSFIGV
                                VQKHF+IFEEE HSLLALGLAIPAYDQVLKASHAFN LDSR FIGV
Subjt:  ---------------------QKPVQKHFNIFEEEPHSLLALGLAIPAYDQVLKASHAFNKLDSRSFIGV

A0A6J1DWK5 Glycine--tRNA ligase3.5e-3857.06Show/hide
Query:  LSRLGDDGAQSLLEKFFISKEWDSLFENSRASRQILGAWGMGWEIWIDGMEITQFTYFQQAGSQQLLPVVVKITYGLERILMLLQ---------------
        LS LG D A   +   F+   W+S          +LGAWG+GWEIW+DGMEITQFTYFQQAGSQQLLP+ V+ITYGLERILMLLQ               
Subjt:  LSRLGDDGAQSLLEKFFISKEWDSLFENSRASRQILGAWGMGWEIWIDGMEITQFTYFQQAGSQQLLPVVVKITYGLERILMLLQ---------------

Query:  ---------------------QKPVQKHFNIFEEEPHSLLALGLAIPAYDQVLKASHAFNKLDSRSFIGV
                                VQKHFNIFEEE HSLLALGLAIPAYDQVLKASHAFN LDSR FIGV
Subjt:  ---------------------QKPVQKHFNIFEEEPHSLLALGLAIPAYDQVLKASHAFNKLDSRSFIGV

A0A6J1IFY6 Glycine--tRNA ligase3.9e-3755.29Show/hide
Query:  LSRLGDDGAQSLLEKFFISKEWDSLFENSRASRQILGAWGMGWEIWIDGMEITQFTYFQQAGSQQLLPVVVKITYGLERILMLLQ---------------
        LS LG D A   +   F+   W+S          +LGAWG+GWEIW+DGMEITQFTYFQQ+GSQQLLPV V+ITYGLERILMLLQ               
Subjt:  LSRLGDDGAQSLLEKFFISKEWDSLFENSRASRQILGAWGMGWEIWIDGMEITQFTYFQQAGSQQLLPVVVKITYGLERILMLLQ---------------

Query:  ---------------------QKPVQKHFNIFEEEPHSLLALGLAIPAYDQVLKASHAFNKLDSRSFIGV
                                +QKHFNIFEEE HSLLALGL IPAYDQVLKASHAFN LDSR F+GV
Subjt:  ---------------------QKPVQKHFNIFEEEPHSLLALGLAIPAYDQVLKASHAFNKLDSRSFIGV

SwissProt top hitse value%identityAlignment
A2C3W9 Glycine--tRNA ligase alpha subunit1.3e-2439.77Show/hide
Query:  DGAQ----SLLEKFFIS-KEWDSLFENSRASRQILGAWGMGWEIWIDGMEITQFTYFQQAGSQQLLPVVVKITYGLERILMLLQ----------------
        DG Q    S LE   IS KE D  F         LGAWG+GWE+W+DGME+TQFTYFQQ G     PV ++ITYGLER+ M LQ                
Subjt:  DGAQ----SLLEKFFIS-KEWDSLFENSRASRQILGAWGMGWEIWIDGMEITQFTYFQQAGSQQLLPVVVKITYGLERILMLLQ----------------

Query:  --------------------QKPVQKHFNIFEEEPHSLLALGLAIPAYDQVLKASHAFNKLDSRSFIGVFQSMLVI
                             + ++K F I+EEE H L+A  L  P  D VLK SH FN L++R  I V +   +I
Subjt:  --------------------QKPVQKHFNIFEEEPHSLLALGLAIPAYDQVLKASHAFNKLDSRSFIGVFQSMLVI

B5YJ13 Glycine--tRNA ligase alpha subunit1.3e-2441.56Show/hide
Query:  FISKEWDSLFENSRASRQILGAWGMGWEIWIDGMEITQFTYFQQAGSQQLLPVVVKITYGLERILMLLQQ--------------------KP--------
        F+  +W+S           LGAWG+GWE+W+DGMEITQFTYFQQ G   L PV V+ITYGLERI M LQ+                    +P        
Subjt:  FISKEWDSLFENSRASRQILGAWGMGWEIWIDGMEITQFTYFQQAGSQQLLPVVVKITYGLERILMLLQQ--------------------KP--------

Query:  --------VQKHFNIFEEEPHSLLALGLAIPAYDQVLKASHAFNKLDSRSFIGV
                ++KHF+ +E E + L  LGL  PAY+  LK SH FN LD+R  + V
Subjt:  --------VQKHFNIFEEEPHSLLALGLAIPAYDQVLKASHAFNKLDSRSFIGV

C4XS53 Glycine--tRNA ligase alpha subunit2.1e-2442.21Show/hide
Query:  FISKEWDSLFENSRASRQILGAWGMGWEIWIDGMEITQFTYFQQAGSQQLLPVVVKITYGLERILMLLQQKP----------------------------
        F+  +W+S           LGAWG+GWE+W+DGME TQFTYFQQ G   L PV V+ITYGLERI M LQQK                             
Subjt:  FISKEWDSLFENSRASRQILGAWGMGWEIWIDGMEITQFTYFQQAGSQQLLPVVVKITYGLERILMLLQQKP----------------------------

Query:  --------VQKHFNIFEEEPHSLLALGLAIPAYDQVLKASHAFNKLDSRSFIGV
                +  HFN  E+E   L  LGL  PAYD  LK SHAFN L++R  I +
Subjt:  --------VQKHFNIFEEEPHSLLALGLAIPAYDQVLKASHAFNKLDSRSFIGV

Q8L785 Glycine--tRNA ligase, chloroplastic/mitochondrial 21.1e-3351.3Show/hide
Query:  FISKEWDSLFENSRASRQILGAWGMGWEIWIDGMEITQFTYFQQAGSQQLLPVVVKITYGLERILMLLQQ------------------------------
        F+   W+S          +LGAWG+GWEIW+DGMEITQFTYFQQAGS  L PV V+ITYGLERI+MLLQ+                              
Subjt:  FISKEWDSLFENSRASRQILGAWGMGWEIWIDGMEITQFTYFQQAGSQQLLPVVVKITYGLERILMLLQQ------------------------------

Query:  ------KPVQKHFNIFEEEPHSLLALGLAIPAYDQVLKASHAFNKLDSRSFIGV
                +QKHF+ F+EE  SLLALGL IPAYDQ+LK SHAFN LD+R FIGV
Subjt:  ------KPVQKHFNIFEEEPHSLLALGLAIPAYDQVLKASHAFNKLDSRSFIGV

Q8RH45 Glycine--tRNA ligase alpha subunit5.6e-2541.36Show/hide
Query:  FISKEWDSLFENSRASRQILGAWGMGWEIWIDGMEITQFTYFQQAGSQQLLPVVVKITYGLERILMLLQQK-----------------------------
        F+  +W+S           LGAWG+GWE+W+DGMEITQFTYFQQ G  +L  + V+ITYGLER+ + +Q K                             
Subjt:  FISKEWDSLFENSRASRQILGAWGMGWEIWIDGMEITQFTYFQQAGSQQLLPVVVKITYGLERILMLLQQK-----------------------------

Query:  ----PVQKHFNIF---EEEPHSLLALGLAIPAYDQVLKASHAFNKLDSRSFIGVFQSMLVIL
             + KHF  F   EEE   +L  GL +PAYD VLK SHAFN LDSR  I   + M  IL
Subjt:  ----PVQKHFNIF---EEEPHSLLALGLAIPAYDQVLKASHAFNKLDSRSFIGVFQSMLVIL

Arabidopsis top hitse value%identityAlignment
AT3G48110.1 glycine-tRNA ligases8.0e-3551.3Show/hide
Query:  FISKEWDSLFENSRASRQILGAWGMGWEIWIDGMEITQFTYFQQAGSQQLLPVVVKITYGLERILMLLQQ------------------------------
        F+   W+S          +LGAWG+GWEIW+DGMEITQFTYFQQAGS  L PV V+ITYGLERI+MLLQ+                              
Subjt:  FISKEWDSLFENSRASRQILGAWGMGWEIWIDGMEITQFTYFQQAGSQQLLPVVVKITYGLERILMLLQQ------------------------------

Query:  ------KPVQKHFNIFEEEPHSLLALGLAIPAYDQVLKASHAFNKLDSRSFIGV
                +QKHF+ F+EE  SLLALGL IPAYDQ+LK SHAFN LD+R FIGV
Subjt:  ------KPVQKHFNIFEEEPHSLLALGLAIPAYDQVLKASHAFNKLDSRSFIGV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAATTCCTTTATCCAATGGACAATTCGAATTGTCAAGATTAGGAGACGATGGAGCTCAATCATTGCTGGAAAAATTCTTTATTTCAAAGGAATGGGATTCTCTTTT
TGAAAATTCAAGGGCGTCAAGGCAGATACTTGGAGCTTGGGGAATGGGATGGGAAATCTGGATAGATGGGATGGAGATTACCCAATTCACTTACTTTCAGCAGGCTGGAA
GTCAACAATTGTTGCCCGTAGTTGTTAAAATCACTTATGGTCTTGAACGTATCCTCATGTTACTGCAGCAAAAGCCAGTTCAAAAACATTTCAACATCTTTGAGGAGGAA
CCTCACTCCTTGCTTGCTTTAGGATTAGCGATCCCTGCGTATGATCAGGTTTTGAAGGCATCCCATGCTTTCAACAAATTGGACTCAAGAAGCTTCATTGGGGTATTTCA
GAGCATGCTCGTTATTTTGATCAGATGCAAAGCTCTTTTTGAAGATGGTTCCTTTTTTGGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAATTCCTTTATCCAATGGACAATTCGAATTGTCAAGATTAGGAGACGATGGAGCTCAATCATTGCTGGAAAAATTCTTTATTTCAAAGGAATGGGATTCTCTTTT
TGAAAATTCAAGGGCGTCAAGGCAGATACTTGGAGCTTGGGGAATGGGATGGGAAATCTGGATAGATGGGATGGAGATTACCCAATTCACTTACTTTCAGCAGGCTGGAA
GTCAACAATTGTTGCCCGTAGTTGTTAAAATCACTTATGGTCTTGAACGTATCCTCATGTTACTGCAGCAAAAGCCAGTTCAAAAACATTTCAACATCTTTGAGGAGGAA
CCTCACTCCTTGCTTGCTTTAGGATTAGCGATCCCTGCGTATGATCAGGTTTTGAAGGCATCCCATGCTTTCAACAAATTGGACTCAAGAAGCTTCATTGGGGTATTTCA
GAGCATGCTCGTTATTTTGATCAGATGCAAAGCTCTTTTTGAAGATGGTTCCTTTTTTGGTTAA
Protein sequenceShow/hide protein sequence
MEIPLSNGQFELSRLGDDGAQSLLEKFFISKEWDSLFENSRASRQILGAWGMGWEIWIDGMEITQFTYFQQAGSQQLLPVVVKITYGLERILMLLQQKPVQKHFNIFEEE
PHSLLALGLAIPAYDQVLKASHAFNKLDSRSFIGVFQSMLVILIRCKALFEDGSFFG