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Lag0034265 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0034265
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr3:5828581..5828928
RNA-Seq ExpressionLag0034265
SyntenyLag0034265
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050079.1 hypothetical protein E6C27_scaffold675G00630 [Cucumis melo var. makuwa]2.8e-2864.81Show/hide
Query:  ASATKLAFVFLVCVAFLASPSMACMAVMAPAPDPLVTEDFSLFPCISSVPEVTKCMIDVFRNAVAPHPSCCTAISKLKDCSSEFLKDIPSVDMILIKSIC
        ++ TKL  V  VC+A LAS   AC  ++A A     +EDFSLFPCIS VP+ TKC+IDV +N VAPHPSCC AI++L DCSS+FLKDIPS DMIL+KSIC
Subjt:  ASATKLAFVFLVCVAFLASPSMACMAVMAPAPDPLVTEDFSLFPCISSVPEVTKCMIDVFRNAVAPHPSCCTAISKLKDCSSEFLKDIPSVDMILIKSIC

Query:  ALWGVSIS
        A WGVSIS
Subjt:  ALWGVSIS

KAA0050081.1 hypothetical protein E6C27_scaffold675G00650 [Cucumis melo var. makuwa]7.2e-2960.34Show/hide
Query:  MVAVSLNASATKLAFVFLVCVAFLASPSMACMAVMAPA-PDPLVTEDFSLFPCISSVPEVTKCMIDVFRNAVAPHPSCCTAISKLKDCSSEFLKDIPSVD
        M A SL  S  KL  +FL C A    P+ A  A +AP  PDP +TED S FPC S VPE TKCMIDVF++ +APHP+CC AISKLK CSS F   IPS D
Subjt:  MVAVSLNASATKLAFVFLVCVAFLASPSMACMAVMAPA-PDPLVTEDFSLFPCISSVPEVTKCMIDVFRNAVAPHPSCCTAISKLKDCSSEFLKDIPSVD

Query:  MILIKSICALWGVSIS
        MILIKS+C  WG SIS
Subjt:  MILIKSICALWGVSIS

KAE8653021.1 hypothetical protein Csa_004567 [Cucumis sativus]8.9e-2764.42Show/hide
Query:  SATKLAFVFLVCVAFLASPSMACMAVMAPAPDPLVTEDFSLFPCISSVPEVTKCMIDVFRNAVAPHPSCCTAISKLKDCSSEFLKDIPSVDMILIKSICA
        ++ KL  VFLVC+A LA   MA    +APA DP   E+FSL  C S + E T CM+DV +NAVAPHPSCC A SKL DCSSEFLK IPS DMILIK ICA
Subjt:  SATKLAFVFLVCVAFLASPSMACMAVMAPAPDPLVTEDFSLFPCISSVPEVTKCMIDVFRNAVAPHPSCCTAISKLKDCSSEFLKDIPSVDMILIKSICA

Query:  LWGV
        LWGV
Subjt:  LWGV

KGN65096.1 hypothetical protein Csa_004577 [Cucumis sativus]1.5e-2657.76Show/hide
Query:  MVAVSLNASATKLAFVFLVCVAFLASPSMACMAVMAPA-PDPLVTEDFSLFPCISSVPEVTKCMIDVFRNAVAPHPSCCTAISKLKDCSSEFLKDIPSVD
        M A SL     KL  VF+ C A  A P+ A    MAP  P P  TED S FPC S VPE TKCMIDVF++ +A HP+CC AISKLK CSS F   IPS D
Subjt:  MVAVSLNASATKLAFVFLVCVAFLASPSMACMAVMAPA-PDPLVTEDFSLFPCISSVPEVTKCMIDVFRNAVAPHPSCCTAISKLKDCSSEFLKDIPSVD

Query:  MILIKSICALWGVSIS
        MI+IKS+C  WG SIS
Subjt:  MILIKSICALWGVSIS

TYK10345.1 hypothetical protein E5676_scaffold367G00210 [Cucumis melo var. makuwa]1.6e-2866.67Show/hide
Query:  ASATKLAFVFLVCVAFLASPSMACMAVMAPAPDPLVTEDFSLFPCISSVPEVTKCMIDVFRNAVAPHPSCCTAISKLKDCSSEFLKDIPSVDMILIKSIC
        ++ TKL  V LVC+A LAS   A   ++A A     +EDFSLFPCIS VP+ TKC+IDV +NAVAPHPSCC AIS+L DCSS+FLKDIPS DMIL+KSIC
Subjt:  ASATKLAFVFLVCVAFLASPSMACMAVMAPAPDPLVTEDFSLFPCISSVPEVTKCMIDVFRNAVAPHPSCCTAISKLKDCSSEFLKDIPSVDMILIKSIC

Query:  ALWGVSIS
        A WGVSIS
Subjt:  ALWGVSIS

TrEMBL top hitse value%identityAlignment
A0A0A0LYQ3 Uncharacterized protein7.3e-2757.76Show/hide
Query:  MVAVSLNASATKLAFVFLVCVAFLASPSMACMAVMAPA-PDPLVTEDFSLFPCISSVPEVTKCMIDVFRNAVAPHPSCCTAISKLKDCSSEFLKDIPSVD
        M A SL     KL  VF+ C A  A P+ A    MAP  P P  TED S FPC S VPE TKCMIDVF++ +A HP+CC AISKLK CSS F   IPS D
Subjt:  MVAVSLNASATKLAFVFLVCVAFLASPSMACMAVMAPA-PDPLVTEDFSLFPCISSVPEVTKCMIDVFRNAVAPHPSCCTAISKLKDCSSEFLKDIPSVD

Query:  MILIKSICALWGVSIS
        MI+IKS+C  WG SIS
Subjt:  MILIKSICALWGVSIS

A0A5A7U8Y3 Uncharacterized protein9.6e-2766.06Show/hide
Query:  ASATKLAFVFLVCVAFLASPSMA-CMAVMAPAPDPLVTEDFSLFPCISSVPEVTKCMIDVFRNAVAPHPSCCTAISKLKDCSSEFLKDIPSVDMILIKSI
        AS TKL    L C+  LAS  MA  + V A AP+     D SLFPC S VP+ T+C+IDV +NAVAPHPSCC AIS+L DCSS+FLKDIPSVDMIL+KSI
Subjt:  ASATKLAFVFLVCVAFLASPSMA-CMAVMAPAPDPLVTEDFSLFPCISSVPEVTKCMIDVFRNAVAPHPSCCTAISKLKDCSSEFLKDIPSVDMILIKSI

Query:  CALWGVSIS
        CALWGVSIS
Subjt:  CALWGVSIS

A0A5A7U904 Uncharacterized protein3.5e-2960.34Show/hide
Query:  MVAVSLNASATKLAFVFLVCVAFLASPSMACMAVMAPA-PDPLVTEDFSLFPCISSVPEVTKCMIDVFRNAVAPHPSCCTAISKLKDCSSEFLKDIPSVD
        M A SL  S  KL  +FL C A    P+ A  A +AP  PDP +TED S FPC S VPE TKCMIDVF++ +APHP+CC AISKLK CSS F   IPS D
Subjt:  MVAVSLNASATKLAFVFLVCVAFLASPSMACMAVMAPA-PDPLVTEDFSLFPCISSVPEVTKCMIDVFRNAVAPHPSCCTAISKLKDCSSEFLKDIPSVD

Query:  MILIKSICALWGVSIS
        MILIKS+C  WG SIS
Subjt:  MILIKSICALWGVSIS

A0A5A7U9B0 Uncharacterized protein1.3e-2864.81Show/hide
Query:  ASATKLAFVFLVCVAFLASPSMACMAVMAPAPDPLVTEDFSLFPCISSVPEVTKCMIDVFRNAVAPHPSCCTAISKLKDCSSEFLKDIPSVDMILIKSIC
        ++ TKL  V  VC+A LAS   AC  ++A A     +EDFSLFPCIS VP+ TKC+IDV +N VAPHPSCC AI++L DCSS+FLKDIPS DMIL+KSIC
Subjt:  ASATKLAFVFLVCVAFLASPSMACMAVMAPAPDPLVTEDFSLFPCISSVPEVTKCMIDVFRNAVAPHPSCCTAISKLKDCSSEFLKDIPSVDMILIKSIC

Query:  ALWGVSIS
        A WGVSIS
Subjt:  ALWGVSIS

A0A5D3CFS6 Uncharacterized protein7.8e-2966.67Show/hide
Query:  ASATKLAFVFLVCVAFLASPSMACMAVMAPAPDPLVTEDFSLFPCISSVPEVTKCMIDVFRNAVAPHPSCCTAISKLKDCSSEFLKDIPSVDMILIKSIC
        ++ TKL  V LVC+A LAS   A   ++A A     +EDFSLFPCIS VP+ TKC+IDV +NAVAPHPSCC AIS+L DCSS+FLKDIPS DMIL+KSIC
Subjt:  ASATKLAFVFLVCVAFLASPSMACMAVMAPAPDPLVTEDFSLFPCISSVPEVTKCMIDVFRNAVAPHPSCCTAISKLKDCSSEFLKDIPSVDMILIKSIC

Query:  ALWGVSIS
        A WGVSIS
Subjt:  ALWGVSIS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGCAGTGTCTCTGAACGCATCTGCAACTAAGTTAGCATTTGTATTCCTTGTTTGCGTAGCCTTTTTAGCATCACCTTCAATGGCCTGCATGGCGGTGATGGCGCC
AGCACCTGATCCGTTGGTAACAGAGGATTTCTCTTTATTCCCCTGTATATCATCTGTTCCAGAGGTGACGAAATGCATGATAGATGTGTTTAGAAATGCAGTTGCTCCTC
ATCCCTCATGTTGTACAGCCATTTCTAAGCTCAAAGATTGTTCTTCTGAGTTTCTCAAAGATATTCCCTCGGTTGACATGATTTTGATTAAGAGCATTTGTGCTTTGTGG
GGTGTTTCAATTTCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGCAGTGTCTCTGAACGCATCTGCAACTAAGTTAGCATTTGTATTCCTTGTTTGCGTAGCCTTTTTAGCATCACCTTCAATGGCCTGCATGGCGGTGATGGCGCC
AGCACCTGATCCGTTGGTAACAGAGGATTTCTCTTTATTCCCCTGTATATCATCTGTTCCAGAGGTGACGAAATGCATGATAGATGTGTTTAGAAATGCAGTTGCTCCTC
ATCCCTCATGTTGTACAGCCATTTCTAAGCTCAAAGATTGTTCTTCTGAGTTTCTCAAAGATATTCCCTCGGTTGACATGATTTTGATTAAGAGCATTTGTGCTTTGTGG
GGTGTTTCAATTTCCTAA
Protein sequenceShow/hide protein sequence
MVAVSLNASATKLAFVFLVCVAFLASPSMACMAVMAPAPDPLVTEDFSLFPCISSVPEVTKCMIDVFRNAVAPHPSCCTAISKLKDCSSEFLKDIPSVDMILIKSICALW
GVSIS