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Lag0034268 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0034268
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr3:5858145..5858492
RNA-Seq ExpressionLag0034268
SyntenyLag0034268
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050063.1 hypothetical protein E6C27_scaffold675G00440 [Cucumis melo var. makuwa]2.3e-2767.26Show/hide
Query:  MSLNASTMKLVLVFLVCIAILASPSMARMTTM-APTPDPLVTEDFSLFPCISSIPEVAKCVIDVLKNAVTPHPSCCKAISKLKDCSSEFLKDIPSVDMIL
        M+ +A T KL L+ LVCIAILAS   AR T + A TP   +++DFSLFPCIS +P   K VIDVLKNAV PHPSCC+AIS+L DCSS+FLKDIPS DMIL
Subjt:  MSLNASTMKLVLVFLVCIAILASPSMARMTTM-APTPDPLVTEDFSLFPCISSIPEVAKCVIDVLKNAVTPHPSCCKAISKLKDCSSEFLKDIPSVDMIL

Query:  IKSVCAVWGVSIS
        +KS+CA WGVSIS
Subjt:  IKSVCAVWGVSIS

KAA0050081.1 hypothetical protein E6C27_scaffold675G00650 [Cucumis melo var. makuwa]7.7e-3162.93Show/hide
Query:  MAAMSLNASTMKLVLVFLVCIAILASPSMARMTTMAPT-PDPLVTEDFSLFPCISSIPEVAKCVIDVLKNAVTPHPSCCKAISKLKDCSSEFLKDIPSVD
        MAA SL  STMKL+L+FL C AI   P+ A    +APT PDP +TED S FPC S +PE  KC+IDV K+ + PHP+CCKAISKLK CSS F   IPS D
Subjt:  MAAMSLNASTMKLVLVFLVCIAILASPSMARMTTMAPT-PDPLVTEDFSLFPCISSIPEVAKCVIDVLKNAVTPHPSCCKAISKLKDCSSEFLKDIPSVD

Query:  MILIKSVCAVWGVSIS
        MILIKSVC  WG SIS
Subjt:  MILIKSVCAVWGVSIS

KAE8653021.1 hypothetical protein Csa_004567 [Cucumis sativus]2.3e-2765.38Show/hide
Query:  STMKLVLVFLVCIAILASPSMARMTTMAPTPDPLVTEDFSLFPCISSIPEVAKCVIDVLKNAVTPHPSCCKAISKLKDCSSEFLKDIPSVDMILIKSVCA
        ++MKL LVFLVCIAILA   MA    +AP  DP   E+FSL  C S I E   C++DV+KNAV PHPSCCKA SKL DCSSEFLK IPS DMILIK +CA
Subjt:  STMKLVLVFLVCIAILASPSMARMTTMAPTPDPLVTEDFSLFPCISSIPEVAKCVIDVLKNAVTPHPSCCKAISKLKDCSSEFLKDIPSVDMILIKSVCA

Query:  VWGV
        +WGV
Subjt:  VWGV

KGN65096.1 hypothetical protein Csa_004577 [Cucumis sativus]5.5e-2961.21Show/hide
Query:  MAAMSLNASTMKLVLVFLVCIAILASPSMARMTTMAPT-PDPLVTEDFSLFPCISSIPEVAKCVIDVLKNAVTPHPSCCKAISKLKDCSSEFLKDIPSVD
        MAA SL   TMKL+LVF+ C AI A P+ A    MAPT P P  TED S FPC S +PE  KC+IDV K+ +  HP+CCKAISKLK CSS F   IPS D
Subjt:  MAAMSLNASTMKLVLVFLVCIAILASPSMARMTTMAPT-PDPLVTEDFSLFPCISSIPEVAKCVIDVLKNAVTPHPSCCKAISKLKDCSSEFLKDIPSVD

Query:  MILIKSVCAVWGVSIS
        MI+IKSVC  WG SIS
Subjt:  MILIKSVCAVWGVSIS

TYK10345.1 hypothetical protein E5676_scaffold367G00210 [Cucumis melo var. makuwa]1.9e-2969.91Show/hide
Query:  MSLNASTMKLVLVFLVCIAILASPSMARMTTM-APTPDPLVTEDFSLFPCISSIPEVAKCVIDVLKNAVTPHPSCCKAISKLKDCSSEFLKDIPSVDMIL
        M+ +A T KL LV LVCIAILAS   AR T + A TP    +EDFSLFPCIS +P+  KCVIDVLKNAV PHPSCC+AIS+L DCSS+FLKDIPS DMIL
Subjt:  MSLNASTMKLVLVFLVCIAILASPSMARMTTM-APTPDPLVTEDFSLFPCISSIPEVAKCVIDVLKNAVTPHPSCCKAISKLKDCSSEFLKDIPSVDMIL

Query:  IKSVCAVWGVSIS
        +KS+CA WGVSIS
Subjt:  IKSVCAVWGVSIS

TrEMBL top hitse value%identityAlignment
A0A0A0LYQ3 Uncharacterized protein2.7e-2961.21Show/hide
Query:  MAAMSLNASTMKLVLVFLVCIAILASPSMARMTTMAPT-PDPLVTEDFSLFPCISSIPEVAKCVIDVLKNAVTPHPSCCKAISKLKDCSSEFLKDIPSVD
        MAA SL   TMKL+LVF+ C AI A P+ A    MAPT P P  TED S FPC S +PE  KC+IDV K+ +  HP+CCKAISKLK CSS F   IPS D
Subjt:  MAAMSLNASTMKLVLVFLVCIAILASPSMARMTTMAPT-PDPLVTEDFSLFPCISSIPEVAKCVIDVLKNAVTPHPSCCKAISKLKDCSSEFLKDIPSVD

Query:  MILIKSVCAVWGVSIS
        MI+IKSVC  WG SIS
Subjt:  MILIKSVCAVWGVSIS

A0A5A7U2D8 Uncharacterized protein1.1e-2767.26Show/hide
Query:  MSLNASTMKLVLVFLVCIAILASPSMARMTTM-APTPDPLVTEDFSLFPCISSIPEVAKCVIDVLKNAVTPHPSCCKAISKLKDCSSEFLKDIPSVDMIL
        M+ +A T KL L+ LVCIAILAS   AR T + A TP   +++DFSLFPCIS +P   K VIDVLKNAV PHPSCC+AIS+L DCSS+FLKDIPS DMIL
Subjt:  MSLNASTMKLVLVFLVCIAILASPSMARMTTM-APTPDPLVTEDFSLFPCISSIPEVAKCVIDVLKNAVTPHPSCCKAISKLKDCSSEFLKDIPSVDMIL

Query:  IKSVCAVWGVSIS
        +KS+CA WGVSIS
Subjt:  IKSVCAVWGVSIS

A0A5A7U8Y3 Uncharacterized protein2.5e-2765.74Show/hide
Query:  ASTMKLVLVFLVCIAILASPSMARMTTMAPTPDPLVTEDFSLFPCISSIPEVAKCVIDVLKNAVTPHPSCCKAISKLKDCSSEFLKDIPSVDMILIKSVC
        AS  KL L  L CI ILAS  MAR  T+A         D SLFPC S +P+  +CVIDVLKNAV PHPSCC+AIS+L DCSS+FLKDIPSVDMIL+KS+C
Subjt:  ASTMKLVLVFLVCIAILASPSMARMTTMAPTPDPLVTEDFSLFPCISSIPEVAKCVIDVLKNAVTPHPSCCKAISKLKDCSSEFLKDIPSVDMILIKSVC

Query:  AVWGVSIS
        A+WGVSIS
Subjt:  AVWGVSIS

A0A5A7U904 Uncharacterized protein3.7e-3162.93Show/hide
Query:  MAAMSLNASTMKLVLVFLVCIAILASPSMARMTTMAPT-PDPLVTEDFSLFPCISSIPEVAKCVIDVLKNAVTPHPSCCKAISKLKDCSSEFLKDIPSVD
        MAA SL  STMKL+L+FL C AI   P+ A    +APT PDP +TED S FPC S +PE  KC+IDV K+ + PHP+CCKAISKLK CSS F   IPS D
Subjt:  MAAMSLNASTMKLVLVFLVCIAILASPSMARMTTMAPT-PDPLVTEDFSLFPCISSIPEVAKCVIDVLKNAVTPHPSCCKAISKLKDCSSEFLKDIPSVD

Query:  MILIKSVCAVWGVSIS
        MILIKSVC  WG SIS
Subjt:  MILIKSVCAVWGVSIS

A0A5D3CFS6 Uncharacterized protein9.2e-3069.91Show/hide
Query:  MSLNASTMKLVLVFLVCIAILASPSMARMTTM-APTPDPLVTEDFSLFPCISSIPEVAKCVIDVLKNAVTPHPSCCKAISKLKDCSSEFLKDIPSVDMIL
        M+ +A T KL LV LVCIAILAS   AR T + A TP    +EDFSLFPCIS +P+  KCVIDVLKNAV PHPSCC+AIS+L DCSS+FLKDIPS DMIL
Subjt:  MSLNASTMKLVLVFLVCIAILASPSMARMTTM-APTPDPLVTEDFSLFPCISSIPEVAKCVIDVLKNAVTPHPSCCKAISKLKDCSSEFLKDIPSVDMIL

Query:  IKSVCAVWGVSIS
        +KS+CA WGVSIS
Subjt:  IKSVCAVWGVSIS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCAATGTCACTAAACGCATCAACGATGAAATTGGTACTTGTATTTCTAGTTTGCATAGCCATTTTAGCGTCACCTTCCATGGCTCGCATGACAACAATGGCGCC
AACACCTGATCCATTGGTAACAGAGGATTTCTCTTTGTTTCCTTGCATATCATCTATTCCAGAGGTGGCGAAATGCGTGATAGATGTATTGAAGAATGCAGTTACTCCTC
ATCCTTCCTGTTGCAAAGCCATTTCTAAACTCAAAGATTGTTCTTCCGAGTTTCTCAAAGACATTCCCTCTGTTGACATGATTTTGATTAAGAGTGTTTGTGCTGTATGG
GGCGTTTCAATCTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGCAATGTCACTAAACGCATCAACGATGAAATTGGTACTTGTATTTCTAGTTTGCATAGCCATTTTAGCGTCACCTTCCATGGCTCGCATGACAACAATGGCGCC
AACACCTGATCCATTGGTAACAGAGGATTTCTCTTTGTTTCCTTGCATATCATCTATTCCAGAGGTGGCGAAATGCGTGATAGATGTATTGAAGAATGCAGTTACTCCTC
ATCCTTCCTGTTGCAAAGCCATTTCTAAACTCAAAGATTGTTCTTCCGAGTTTCTCAAAGACATTCCCTCTGTTGACATGATTTTGATTAAGAGTGTTTGTGCTGTATGG
GGCGTTTCAATCTCTTAA
Protein sequenceShow/hide protein sequence
MAAMSLNASTMKLVLVFLVCIAILASPSMARMTTMAPTPDPLVTEDFSLFPCISSIPEVAKCVIDVLKNAVTPHPSCCKAISKLKDCSSEFLKDIPSVDMILIKSVCAVW
GVSIS