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Lag0034288 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0034288
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr3:6043417..6045101
RNA-Seq ExpressionLag0034288
SyntenyLag0034288
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR036875 - Zinc finger, CCHC-type superfamily
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5469007.1 hypothetical protein F2P56_013112 [Juglans regia]1.0e-2440.82Show/hide
Query:  GPWVYDRALILFEEIKGGERYSRLKFQHASFWIHFLELPRVCFNRKWAEALGNAVGRFERVDFDADEYEVGGSMRVRVKVDVQNPLRRGTVIKIGSKAEE
        GPW +D+ L+L +E  G  +   L   H  FW+   +LP +  N    + +G+ +G F  VD    E+E G  MRVRV +D+  PL+R   +K+G +   
Subjt:  GPWVYDRALILFEEIKGGERYSRLKFQHASFWIHFLELPRVCFNRKWAEALGNAVGRFERVDFDADEYEVGGSMRVRVKVDVQNPLRRGTVIKIGSKAEE

Query:  EWIKIRYEKLPDFCYGCGRLGHLARDCSDF-EVNNKGD-LPYGPELR
         W+++ YE+LPDFCY CG LGH  R+C++F  VN + D LPYG  LR
Subjt:  EWIKIRYEKLPDFCYGCGRLGHLARDCSDF-EVNNKGD-LPYGPELR

XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]1.0e-2743.15Show/hide
Query:  GPWVYDRALILFEEIKGGERYSRLKFQHASFWIHFLELPRVCFNRKWAEALGNAVGRFERVDFDADEYEVGGSMRVRVKVDVQNPLRRGTVIKIGSKAEE
        GPW +DRALI+ +      +   + F++ S W+HF +L   C N+  A  LGNA+G FE V+ +A+ +  G  +RVRV+ DV  PL RG  + +      
Subjt:  GPWVYDRALILFEEIKGGERYSRLKFQHASFWIHFLELPRVCFNRKWAEALGNAVGRFERVDFDADEYEVGGSMRVRVKVDVQNPLRRGTVIKIGSKAEE

Query:  EWIKIRYEKLPDFCYGCGRLGHLARDCSDFEVNN-KGDLPYGPELR
         WI I+YE+LPDF Y CGRL H+ +DCSD  V++   +L YGP LR
Subjt:  EWIKIRYEKLPDFCYGCGRLGHLARDCSDFEVNN-KGDLPYGPELR

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]9.3e-2636.32Show/hide
Query:  MDGGPWVYDRALILFEEIKGGERYSRLKFQHASFWIHFLELPRVCFNRKWAEALGNAVGRFERVDFDADEYEVGGSMRVRVKVDVQNPLRRGTVIKIGSK
        M  GPW +D+ALI+ ++    +  S L+F   +FWIH  +LP    N+  A  LGNA+G F  VD +   +  G S+R+RV +D+  PLRRG  I I   
Subjt:  MDGGPWVYDRALILFEEIKGGERYSRLKFQHASFWIHFLELPRVCFNRKWAEALGNAVGRFERVDFDADEYEVGGSMRVRVKVDVQNPLRRGTVIKIGSK

Query:  AEEEWIKIRYEKLPDFCYGCGRLGHLARDCS----DFEVNNKGDLPYGPELRKEAIPRVKRSPDEKKKDEKGKDREERLGGQDRNKEDQG
            WI I+YE+LPDFCY CG +GH + DC       + +++    YGP LR        ++  +K +  K   RE+  G    N +++G
Subjt:  AEEEWIKIRYEKLPDFCYGCGRLGHLARDCS----DFEVNNKGDLPYGPELRKEAIPRVKRSPDEKKKDEKGKDREERLGGQDRNKEDQG

XP_028122006.1 uncharacterized protein LOC114319195 [Camellia sinensis]2.7e-2539.1Show/hide
Query:  MDGGPWVYDRALILFEEIKGGERYSRLKFQHASFWIHFLELPRVCFNRKWAEALGNAVGRFERVDFDADEYEVGGSMRVRVKVDVQNPLRRGTVIKIGSK
        +  GPW +D+ L++  E+    + S ++     FW+H   LP V  N+K  E +GNAVG+F  +D++      G +MR+RV +DV+ PLRRG  + + S 
Subjt:  MDGGPWVYDRALILFEEIKGGERYSRLKFQHASFWIHFLELPRVCFNRKWAEALGNAVGRFERVDFDADEYEVGGSMRVRVKVDVQNPLRRGTVIKIGSK

Query:  AEEEWIKIRYEKLPDFCYGCGRLGHLARDCSDFEVNNKG----DLPYGPELRKEAI
        AE  W+  +YE+LP +CY CGRLGH  R+C D   +  G     L YG  LR + I
Subjt:  AEEEWIKIRYEKLPDFCYGCGRLGHLARDCSDFEVNNKG----DLPYGPELRKEAI

XP_035546641.1 uncharacterized protein LOC108984200 [Juglans regia]1.0e-2440.82Show/hide
Query:  GPWVYDRALILFEEIKGGERYSRLKFQHASFWIHFLELPRVCFNRKWAEALGNAVGRFERVDFDADEYEVGGSMRVRVKVDVQNPLRRGTVIKIGSKAEE
        GPW +D+ L+L +E  G  +   L   H  FW+   +LP +  N    + +G+ +G F  VD    E+E G  MRVRV +D+  PL+R   +K+G +   
Subjt:  GPWVYDRALILFEEIKGGERYSRLKFQHASFWIHFLELPRVCFNRKWAEALGNAVGRFERVDFDADEYEVGGSMRVRVKVDVQNPLRRGTVIKIGSKAEE

Query:  EWIKIRYEKLPDFCYGCGRLGHLARDCSDF-EVNNKGD-LPYGPELR
         W+++ YE+LPDFCY CG LGH  R+C++F  VN + D LPYG  LR
Subjt:  EWIKIRYEKLPDFCYGCGRLGHLARDCSDF-EVNNKGD-LPYGPELR

TrEMBL top hitse value%identityAlignment
A0A392M033 CCHC-type domain-containing protein (Fragment)1.1e-2432.32Show/hide
Query:  GPWVYDRALILFEEIKGGERYSRLKFQHASFWIHFLELPRVCFNRKWAEALGNAVGRFERVDFDADEYEVGGSMRVRVKVDVQNPLRRGTVIKIGSKAEE
        GPW +DR L++   I G E+ S L   H SFW+   +LP    +   A+ LGN VG FE +DF  +   +G  +R+RV VD++ PL+RGT  K+  + +E
Subjt:  GPWVYDRALILFEEIKGGERYSRLKFQHASFWIHFLELPRVCFNRKWAEALGNAVGRFERVDFDADEYEVGGSMRVRVKVDVQNPLRRGTVIKIGSKAEE

Query:  EWIKIRYEKLPDFCYGCGRLGHLARDCSDFEVNNKGDLPYGPELRKEAIPRVKRSPDEKKKDEKGKDREERLGGQDRNKEDQGDRSLFRGHETSPGQTSC
         W+  +YE+LP+FC+ CGR+GH  RDC D E +++       E ++   P ++ SP  K   E  K+          +      +SLF     S GQ S 
Subjt:  EWIKIRYEKLPDFCYGCGRLGHLARDCSDFEVNNKGDLPYGPELRKEAIPRVKRSPDEKKKDEKGKDREERLGGQDRNKEDQGDRSLFRGHETSPGQTSC

Query:  RKDNPPENQSRHLPEVRKIRAVSTAISKPQEASEDMMIDQSASSSLLEKKEKVQKKMSVEGHS
              E       EV + R      S+ +    +M  D    +S   K++ VQK++ V   S
Subjt:  RKDNPPENQSRHLPEVRKIRAVSTAISKPQEASEDMMIDQSASSSLLEKKEKVQKKMSVEGHS

A0A5C7H9Y2 CCHC-type domain-containing protein6.5e-2530.94Show/hide
Query:  MDGGPWVYDRALILFEEIKGGERYSRLKFQHASFWIHFLELPRVCFNRKWAEALGNAVGRFERVDFDADEYEVGGSMRVRVKVDVQNPLRRGTVIKIGSK
        ++GGPW++D+ L++  E  G E+ + L+F++  FWI    LP  C NR+    LG  VG+ + +D       VG  +R+RV +DV NPL+RG  + +G  
Subjt:  MDGGPWVYDRALILFEEIKGGERYSRLKFQHASFWIHFLELPRVCFNRKWAEALGNAVGRFERVDFDADEYEVGGSMRVRVKVDVQNPLRRGTVIKIGSK

Query:  AEEEWIKIRYEKLPDFCYGCGRLGHLARDC--SDFEVNNKGDLPYGPELRKEAIPRVKRSPDEKKKDEKGK-----DREERLGGQDRNKEDQGDRS--LF
         +   + I YE+LP+FCY CG++GHL RDC  +  E+ +     +GP +R  +  R K + ++K   E  +     D  E L  +   K + G  S  L 
Subjt:  AEEEWIKIRYEKLPDFCYGCGRLGHLARDC--SDFEVNNKGDLPYGPELRKEAIPRVKRSPDEKKKDEKGK-----DREERLGGQDRNKEDQGDRS--LF

Query:  RGHETSPGQTSCRKDNPPENQSRHLPEVRKIRAVSTAISKPQEASEDMMIDQSASSSLLEKKEKV
        R  E     T  +  N  E +              TA+S+    S+  ++  + S S    KEK+
Subjt:  RGHETSPGQTSCRKDNPPENQSRHLPEVRKIRAVSTAISKPQEASEDMMIDQSASSSLLEKKEKV

A0A6J1BSZ1 uncharacterized protein LOC1110054814.8e-2843.15Show/hide
Query:  GPWVYDRALILFEEIKGGERYSRLKFQHASFWIHFLELPRVCFNRKWAEALGNAVGRFERVDFDADEYEVGGSMRVRVKVDVQNPLRRGTVIKIGSKAEE
        GPW +DRALI+ +      +   + F++ S W+HF +L   C N+  A  LGNA+G FE V+ +A+ +  G  +RVRV+ DV  PL RG  + +      
Subjt:  GPWVYDRALILFEEIKGGERYSRLKFQHASFWIHFLELPRVCFNRKWAEALGNAVGRFERVDFDADEYEVGGSMRVRVKVDVQNPLRRGTVIKIGSKAEE

Query:  EWIKIRYEKLPDFCYGCGRLGHLARDCSDFEVNN-KGDLPYGPELR
         WI I+YE+LPDF Y CGRL H+ +DCSD  V++   +L YGP LR
Subjt:  EWIKIRYEKLPDFCYGCGRLGHLARDCSDFEVNN-KGDLPYGPELR

A0A6J1DU55 uncharacterized protein LOC1110231354.5e-2636.32Show/hide
Query:  MDGGPWVYDRALILFEEIKGGERYSRLKFQHASFWIHFLELPRVCFNRKWAEALGNAVGRFERVDFDADEYEVGGSMRVRVKVDVQNPLRRGTVIKIGSK
        M  GPW +D+ALI+ ++    +  S L+F   +FWIH  +LP    N+  A  LGNA+G F  VD +   +  G S+R+RV +D+  PLRRG  I I   
Subjt:  MDGGPWVYDRALILFEEIKGGERYSRLKFQHASFWIHFLELPRVCFNRKWAEALGNAVGRFERVDFDADEYEVGGSMRVRVKVDVQNPLRRGTVIKIGSK

Query:  AEEEWIKIRYEKLPDFCYGCGRLGHLARDCS----DFEVNNKGDLPYGPELRKEAIPRVKRSPDEKKKDEKGKDREERLGGQDRNKEDQG
            WI I+YE+LPDFCY CG +GH + DC       + +++    YGP LR        ++  +K +  K   RE+  G    N +++G
Subjt:  AEEEWIKIRYEKLPDFCYGCGRLGHLARDCS----DFEVNNKGDLPYGPELRKEAIPRVKRSPDEKKKDEKGKDREERLGGQDRNKEDQG

A0A6P9EH14 uncharacterized protein LOC1089842005.0e-2540.82Show/hide
Query:  GPWVYDRALILFEEIKGGERYSRLKFQHASFWIHFLELPRVCFNRKWAEALGNAVGRFERVDFDADEYEVGGSMRVRVKVDVQNPLRRGTVIKIGSKAEE
        GPW +D+ L+L +E  G  +   L   H  FW+   +LP +  N    + +G+ +G F  VD    E+E G  MRVRV +D+  PL+R   +K+G +   
Subjt:  GPWVYDRALILFEEIKGGERYSRLKFQHASFWIHFLELPRVCFNRKWAEALGNAVGRFERVDFDADEYEVGGSMRVRVKVDVQNPLRRGTVIKIGSKAEE

Query:  EWIKIRYEKLPDFCYGCGRLGHLARDCSDF-EVNNKGD-LPYGPELR
         W+++ YE+LPDFCY CG LGH  R+C++F  VN + D LPYG  LR
Subjt:  EWIKIRYEKLPDFCYGCGRLGHLARDCSDF-EVNNKGD-LPYGPELR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGGAGGGCCATGGGTCTACGACAGAGCTCTGATATTGTTTGAAGAAATCAAAGGAGGAGAACGATACTCCCGCTTAAAATTCCAACACGCCTCCTTCTGGATACA
CTTCTTAGAATTGCCGAGAGTCTGCTTCAATAGAAAGTGGGCGGAAGCTCTTGGAAATGCGGTAGGCAGGTTCGAACGAGTCGACTTTGACGCTGACGAATACGAAGTTG
GAGGATCTATGAGAGTCAGAGTGAAAGTTGATGTCCAAAATCCCCTGAGGAGAGGGACGGTAATCAAAATAGGATCAAAAGCAGAGGAGGAATGGATCAAGATAAGATAC
GAGAAACTCCCCGACTTCTGCTATGGATGTGGGCGGTTGGGTCACCTGGCCAGGGACTGTAGCGACTTTGAAGTGAACAACAAAGGGGACCTCCCATATGGTCCGGAACT
CAGGAAAGAAGCAATACCAAGAGTGAAAAGGAGTCCAGATGAAAAGAAGAAAGACGAGAAAGGCAAAGACCGGGAAGAAAGGCTCGGAGGGCAAGACAGAAACAAGGAAG
ATCAAGGTGATAGAAGCCTTTTCAGAGGACATGAAACCAGCCCAGGCCAAACAAGCTGCCGGAAAGATAATCCGCCGGAAAATCAGTCCAGACACTTACCGGAGGTGAGG
AAGATCAGGGCAGTCTCAACGGCTATTTCCAAACCCCAAGAAGCGTCAGAGGACATGATGATTGACCAGTCTGCTTCGTCCTCGTTACTGGAAAAAAAGGAAAAAGTACA
GAAAAAGATGTCAGTAGAGGGCCACTCAGGTTTTGCTGCAGCAACTGATTTCACAAGCAGAAGGCAGAAAGTCTGGGGGAAAAAGGACAAGGAGGCTGCTGTTTTGAGGA
ATTTCCAGCTTGGGAAAGCTGGAATCTCCCTTGGAAGCTTCTTTTCTTCACTCCTCTTCTTTTATTCTTCTTTCTCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGACGGAGGGCCATGGGTCTACGACAGAGCTCTGATATTGTTTGAAGAAATCAAAGGAGGAGAACGATACTCCCGCTTAAAATTCCAACACGCCTCCTTCTGGATACA
CTTCTTAGAATTGCCGAGAGTCTGCTTCAATAGAAAGTGGGCGGAAGCTCTTGGAAATGCGGTAGGCAGGTTCGAACGAGTCGACTTTGACGCTGACGAATACGAAGTTG
GAGGATCTATGAGAGTCAGAGTGAAAGTTGATGTCCAAAATCCCCTGAGGAGAGGGACGGTAATCAAAATAGGATCAAAAGCAGAGGAGGAATGGATCAAGATAAGATAC
GAGAAACTCCCCGACTTCTGCTATGGATGTGGGCGGTTGGGTCACCTGGCCAGGGACTGTAGCGACTTTGAAGTGAACAACAAAGGGGACCTCCCATATGGTCCGGAACT
CAGGAAAGAAGCAATACCAAGAGTGAAAAGGAGTCCAGATGAAAAGAAGAAAGACGAGAAAGGCAAAGACCGGGAAGAAAGGCTCGGAGGGCAAGACAGAAACAAGGAAG
ATCAAGGTGATAGAAGCCTTTTCAGAGGACATGAAACCAGCCCAGGCCAAACAAGCTGCCGGAAAGATAATCCGCCGGAAAATCAGTCCAGACACTTACCGGAGGTGAGG
AAGATCAGGGCAGTCTCAACGGCTATTTCCAAACCCCAAGAAGCGTCAGAGGACATGATGATTGACCAGTCTGCTTCGTCCTCGTTACTGGAAAAAAAGGAAAAAGTACA
GAAAAAGATGTCAGTAGAGGGCCACTCAGGTTTTGCTGCAGCAACTGATTTCACAAGCAGAAGGCAGAAAGTCTGGGGGAAAAAGGACAAGGAGGCTGCTGTTTTGAGGA
ATTTCCAGCTTGGGAAAGCTGGAATCTCCCTTGGAAGCTTCTTTTCTTCACTCCTCTTCTTTTATTCTTCTTTCTCCTAG
Protein sequenceShow/hide protein sequence
MDGGPWVYDRALILFEEIKGGERYSRLKFQHASFWIHFLELPRVCFNRKWAEALGNAVGRFERVDFDADEYEVGGSMRVRVKVDVQNPLRRGTVIKIGSKAEEEWIKIRY
EKLPDFCYGCGRLGHLARDCSDFEVNNKGDLPYGPELRKEAIPRVKRSPDEKKKDEKGKDREERLGGQDRNKEDQGDRSLFRGHETSPGQTSCRKDNPPENQSRHLPEVR
KIRAVSTAISKPQEASEDMMIDQSASSSLLEKKEKVQKKMSVEGHSGFAAATDFTSRRQKVWGKKDKEAAVLRNFQLGKAGISLGSFFSSLLFFYSSFS