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Lag0034313 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0034313
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionagamous-like MADS-box protein AGL103
Genome locationchr3:6265702..6266010
RNA-Seq ExpressionLag0034313
SyntenyLag0034313
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0000987 - proximal promoter sequence-specific DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571340.1 MADS-box transcription factor PHERES 2, partial [Cucurbita argyrosperma subsp. sororia]1.5e-1761.29Show/hide
Query:  MSLEEQSYDMFGSSVSMGTHATMPFHHQYH-QIQAMAHQNLQMGRSVVPIENFSQHIFGSNGSSAQIQFNY-ENCFQNPNFDGEPTNGIIMDH
        MS  EQSY+MFG+  SM T   MPFHHQYH Q+Q MA QN QM      +EN SQ +FGSNGS+AQI+ NY  NCFQNPNF  +PTNG++MD+
Subjt:  MSLEEQSYDMFGSSVSMGTHATMPFHHQYH-QIQAMAHQNLQMGRSVVPIENFSQHIFGSNGSSAQIQFNY-ENCFQNPNFDGEPTNGIIMDH

KAG7011113.1 MADS-box transcription factor PHERES 2, partial [Cucurbita argyrosperma subsp. argyrosperma]6.7e-1862.37Show/hide
Query:  MSLEEQSYDMFGSSVSMGTHATMPFHHQYH-QIQAMAHQNLQMGRSVVPIENFSQHIFGSNGSSAQIQFNY-ENCFQNPNFDGEPTNGIIMDH
        MS  EQSY+MFG+  SM T   MPFHHQYH Q+Q MA QN QM      +EN SQ +FGSNGS+AQIQ NY  NCFQNPNF  +PTNG++MD+
Subjt:  MSLEEQSYDMFGSSVSMGTHATMPFHHQYH-QIQAMAHQNLQMGRSVVPIENFSQHIFGSNGSSAQIQFNY-ENCFQNPNFDGEPTNGIIMDH

XP_022932032.1 agamous-like MADS-box protein AGL103 [Cucurbita moschata]1.5e-1761.29Show/hide
Query:  MSLEEQSYDMFGSSVSMGTHATMPFHHQYH-QIQAMAHQNLQMGRSVVPIENFSQHIFGSNGSSAQIQFNY-ENCFQNPNFDGEPTNGIIMDH
        MS  EQSY+MFG+  SM T   MPFHHQYH Q+Q MA QN QM      +EN SQ +FGSNGS+AQI+ NY  NCFQNPNF  +PTNG++MD+
Subjt:  MSLEEQSYDMFGSSVSMGTHATMPFHHQYH-QIQAMAHQNLQMGRSVVPIENFSQHIFGSNGSSAQIQFNY-ENCFQNPNFDGEPTNGIIMDH

XP_022973845.1 agamous-like MADS-box protein AGL103 [Cucurbita maxima]3.0e-1863.44Show/hide
Query:  MSLEEQSYDMFGSSVSMGTHATMPFHHQYH-QIQAMAHQNLQMGRSVVPIENFSQHIFGSNGSSAQIQFNY-ENCFQNPNFDGEPTNGIIMDH
        MS  EQSY+MFG+  SM T   MPFHHQYH Q+Q MA QN QM      +EN SQ +FGSNGSSAQIQ NY  NCFQNPNF  +PTNG++MD+
Subjt:  MSLEEQSYDMFGSSVSMGTHATMPFHHQYH-QIQAMAHQNLQMGRSVVPIENFSQHIFGSNGSSAQIQFNY-ENCFQNPNFDGEPTNGIIMDH

XP_023512369.1 agamous-like MADS-box protein AGL103 [Cucurbita pepo subsp. pepo]3.0e-1863.44Show/hide
Query:  MSLEEQSYDMFGSSVSMGTHATMPFHHQYH-QIQAMAHQNLQMGRSVVPIENFSQHIFGSNGSSAQIQFNY-ENCFQNPNFDGEPTNGIIMDH
        MS  EQSY+MFG+  SM T   MPFHHQYH Q+Q MA QN QM      +EN SQ +FGSNGSSAQIQ NY  NCFQNPNF  +PTNG++MD+
Subjt:  MSLEEQSYDMFGSSVSMGTHATMPFHHQYH-QIQAMAHQNLQMGRSVVPIENFSQHIFGSNGSSAQIQFNY-ENCFQNPNFDGEPTNGIIMDH

TrEMBL top hitse value%identityAlignment
A0A0A0LME6 MADS-box domain-containing protein4.7e-0945.54Show/hide
Query:  EEQSYDMFGSSVSM-GTHATMPFHHQYH------QIQAMAHQNLQMGRSVVPIENFSQHIFGSNGSSAQIQFNY----ENCFQN--PNFDGEPTNGIIMD
        E   Y MFG   SM  T   MPFHH +H      Q+Q MA   LQM      IEN S  +FGSNGS+ Q Q +Y     NCFQN   +F  +PTNG+IM+
Subjt:  EEQSYDMFGSSVSM-GTHATMPFHHQYH------QIQAMAHQNLQMGRSVVPIENFSQHIFGSNGSSAQIQFNY----ENCFQN--PNFDGEPTNGIIMD

Query:  H
        +
Subjt:  H

A0A6J1D6T5 floral homeotic protein DEFICIENS-like2.0e-0443.68Show/hide
Query:  MSLEEQSYDMFGSSVSMGTHAT-MPFHHQYHQIQAMAHQNLQMGRSVVPIENFSQHIFGSN--GSSAQIQFNYENCFQNPNFDGEPT
        M  E+ SY MFGS + + T A  MPFHHQY  +     Q+LQM   +    N S  + GS+   S+ QIQ NY   FQNPN   +PT
Subjt:  MSLEEQSYDMFGSSVSMGTHAT-MPFHHQYHQIQAMAHQNLQMGRSVVPIENFSQHIFGSN--GSSAQIQFNYENCFQNPNFDGEPT

A0A6J1EVI5 agamous-like MADS-box protein AGL1037.2e-1861.29Show/hide
Query:  MSLEEQSYDMFGSSVSMGTHATMPFHHQYH-QIQAMAHQNLQMGRSVVPIENFSQHIFGSNGSSAQIQFNY-ENCFQNPNFDGEPTNGIIMDH
        MS  EQSY+MFG+  SM T   MPFHHQYH Q+Q MA QN QM      +EN SQ +FGSNGS+AQI+ NY  NCFQNPNF  +PTNG++MD+
Subjt:  MSLEEQSYDMFGSSVSMGTHATMPFHHQYH-QIQAMAHQNLQMGRSVVPIENFSQHIFGSNGSSAQIQFNY-ENCFQNPNFDGEPTNGIIMDH

A0A6J1ICD8 agamous-like MADS-box protein AGL1031.4e-1863.44Show/hide
Query:  MSLEEQSYDMFGSSVSMGTHATMPFHHQYH-QIQAMAHQNLQMGRSVVPIENFSQHIFGSNGSSAQIQFNY-ENCFQNPNFDGEPTNGIIMDH
        MS  EQSY+MFG+  SM T   MPFHHQYH Q+Q MA QN QM      +EN SQ +FGSNGSSAQIQ NY  NCFQNPNF  +PTNG++MD+
Subjt:  MSLEEQSYDMFGSSVSMGTHATMPFHHQYH-QIQAMAHQNLQMGRSVVPIENFSQHIFGSNGSSAQIQFNY-ENCFQNPNFDGEPTNGIIMDH

A0A6J1KY19 MADS-box transcription factor PHERES 2-like7.0e-0553.62Show/hide
Query:  YHQIQAMAHQNLQMGRSVVPI-------ENFSQHIFGSNGSSAQIQFNYENCFQNPNFDGEPTNGIIMD
        Y+QIQAM  Q+LQ G S VP+       EN +Q I+GS  S  QI  NY   FQNPNF  +PTNG+IMD
Subjt:  YHQIQAMAHQNLQMGRSVVPI-------ENFSQHIFGSNGSSAQIQFNYENCFQNPNFDGEPTNGIIMD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCATTGGAGGAGCAAAGTTACGACATGTTTGGCAGCTCGGTATCCATGGGAACACATGCGACAATGCCATTCCATCACCAATATCATCAAATCCAAGCAATGGCTCA
TCAAAATCTTCAAATGGGGAGGTCAGTTGTTCCAATTGAGAATTTTTCTCAACACATTTTTGGATCAAATGGGTCATCAGCTCAAATTCAATTCAATTATGAAAATTGCT
TCCAAAACCCTAATTTCGATGGTGAACCAACCAATGGGATAATCATGGATCATCACCCCAAGCTTGAGAATTTTCTCAATACCTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCATTGGAGGAGCAAAGTTACGACATGTTTGGCAGCTCGGTATCCATGGGAACACATGCGACAATGCCATTCCATCACCAATATCATCAAATCCAAGCAATGGCTCA
TCAAAATCTTCAAATGGGGAGGTCAGTTGTTCCAATTGAGAATTTTTCTCAACACATTTTTGGATCAAATGGGTCATCAGCTCAAATTCAATTCAATTATGAAAATTGCT
TCCAAAACCCTAATTTCGATGGTGAACCAACCAATGGGATAATCATGGATCATCACCCCAAGCTTGAGAATTTTCTCAATACCTTTTGA
Protein sequenceShow/hide protein sequence
MSLEEQSYDMFGSSVSMGTHATMPFHHQYHQIQAMAHQNLQMGRSVVPIENFSQHIFGSNGSSAQIQFNYENCFQNPNFDGEPTNGIIMDHHPKLENFLNTF