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Lag0034314 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0034314
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionMADS-box domain-containing protein
Genome locationchr3:6266037..6266679
RNA-Seq ExpressionLag0034314
SyntenyLag0034314
Gene Ontology termsGO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7011113.1 MADS-box transcription factor PHERES 2, partial [Cucurbita argyrosperma subsp. argyrosperma]1.0e-3177.66Show/hide
Query:  MIASYKANCLHKRARKAFGLLDFFSERKKKIECDMSKIRKDVVEFRFPKWDERLDYLLEDQLQLLMVELDSKLDASKKRIEVLTENLEEAGSSQ
        MIASYKANCLHKRARKAF LLDFFSERKKK+E DMSK+RKDV+E RFPKWDERLD+L EDQL++LMV+LDSKLD  K+RIE++TEN EE  S +
Subjt:  MIASYKANCLHKRARKAFGLLDFFSERKKKIECDMSKIRKDVVEFRFPKWDERLDYLLEDQLQLLMVELDSKLDASKKRIEVLTENLEEAGSSQ

XP_022150269.1 agamous-like MADS-box protein AGL17 [Momordica charantia]1.3e-3178.72Show/hide
Query:  MIASYKANCLHKRARKAFGLLDFFSERKKKIECDMSKIRKDVVEFRFPKWDERLDYLLEDQLQLLMVELDSKLDASKKRIEV-LTENLEEAGSS
        MIASY+ANCLHKRARK F LLDFFSERKKKIECD+SK+ KD+ + RFPKWDERLDYLLEDQL++LM ELDSKLDA+K+RIEV + ENLEE  SS
Subjt:  MIASYKANCLHKRARKAFGLLDFFSERKKKIECDMSKIRKDVVEFRFPKWDERLDYLLEDQLQLLMVELDSKLDASKKRIEV-LTENLEEAGSS

XP_022932032.1 agamous-like MADS-box protein AGL103 [Cucurbita moschata]1.0e-3177.66Show/hide
Query:  MIASYKANCLHKRARKAFGLLDFFSERKKKIECDMSKIRKDVVEFRFPKWDERLDYLLEDQLQLLMVELDSKLDASKKRIEVLTENLEEAGSSQ
        MIASYKANCLHKRARKAF LLDFFSERKKK+E DMSK+RKDV+E RFPKWDERLD+L EDQL++LMV+LDSKLD  K+RIE++TEN EE  S +
Subjt:  MIASYKANCLHKRARKAFGLLDFFSERKKKIECDMSKIRKDVVEFRFPKWDERLDYLLEDQLQLLMVELDSKLDASKKRIEVLTENLEEAGSSQ

XP_022973845.1 agamous-like MADS-box protein AGL103 [Cucurbita maxima]1.0e-3177.66Show/hide
Query:  MIASYKANCLHKRARKAFGLLDFFSERKKKIECDMSKIRKDVVEFRFPKWDERLDYLLEDQLQLLMVELDSKLDASKKRIEVLTENLEEAGSSQ
        MIASYKANCLHKRARKAF LLDFFSERKKK+E DMSK+RKDV+E RFPKWDERLD+L EDQLQ+LMV+LDSKLD  K+RIE++T+N EE  S +
Subjt:  MIASYKANCLHKRARKAFGLLDFFSERKKKIECDMSKIRKDVVEFRFPKWDERLDYLLEDQLQLLMVELDSKLDASKKRIEVLTENLEEAGSSQ

XP_023512369.1 agamous-like MADS-box protein AGL103 [Cucurbita pepo subsp. pepo]1.0e-3177.66Show/hide
Query:  MIASYKANCLHKRARKAFGLLDFFSERKKKIECDMSKIRKDVVEFRFPKWDERLDYLLEDQLQLLMVELDSKLDASKKRIEVLTENLEEAGSSQ
        MIASYKANCLHKRARKAF LLDFFSERKKK+E DMSK+RKDV+E RFPKWDERLD+L EDQL++LMV+LDSKLD  K+RIE++TEN EE  S +
Subjt:  MIASYKANCLHKRARKAFGLLDFFSERKKKIECDMSKIRKDVVEFRFPKWDERLDYLLEDQLQLLMVELDSKLDASKKRIEVLTENLEEAGSSQ

TrEMBL top hitse value%identityAlignment
A0A1S3CDG6 MADS-box protein SOC1-like3.5e-3075.53Show/hide
Query:  MIASYKANCLHKRARKAFGLLDFFSERKKKIECDMSKIRKDVVEFRFPKWDERLDYLLEDQLQLLMVELDSKLDASKKRIEVLTE--NLEEAGS
        MIASYK NCLHKRARKAFGL+DFFSERKKK+E DMSK+RKDV E RF KWDERLD+LLEDQL++LM+ELDSK++ +KKRIE+ TE  N+EE  S
Subjt:  MIASYKANCLHKRARKAFGLLDFFSERKKKIECDMSKIRKDVVEFRFPKWDERLDYLLEDQLQLLMVELDSKLDASKKRIEVLTE--NLEEAGS

A0A5D3BUZ8 MADS-box protein SOC1-like3.5e-3075.53Show/hide
Query:  MIASYKANCLHKRARKAFGLLDFFSERKKKIECDMSKIRKDVVEFRFPKWDERLDYLLEDQLQLLMVELDSKLDASKKRIEVLTE--NLEEAGS
        MIASYK NCLHKRARKAFGL+DFFSERKKK+E DMSK+RKDV E RF KWDERLD+LLEDQL++LM+ELDSK++ +KKRIE+ TE  N+EE  S
Subjt:  MIASYKANCLHKRARKAFGLLDFFSERKKKIECDMSKIRKDVVEFRFPKWDERLDYLLEDQLQLLMVELDSKLDASKKRIEVLTE--NLEEAGS

A0A6J1D9H6 agamous-like MADS-box protein AGL176.3e-3278.72Show/hide
Query:  MIASYKANCLHKRARKAFGLLDFFSERKKKIECDMSKIRKDVVEFRFPKWDERLDYLLEDQLQLLMVELDSKLDASKKRIEV-LTENLEEAGSS
        MIASY+ANCLHKRARK F LLDFFSERKKKIECD+SK+ KD+ + RFPKWDERLDYLLEDQL++LM ELDSKLDA+K+RIEV + ENLEE  SS
Subjt:  MIASYKANCLHKRARKAFGLLDFFSERKKKIECDMSKIRKDVVEFRFPKWDERLDYLLEDQLQLLMVELDSKLDASKKRIEV-LTENLEEAGSS

A0A6J1EVI5 agamous-like MADS-box protein AGL1034.8e-3277.66Show/hide
Query:  MIASYKANCLHKRARKAFGLLDFFSERKKKIECDMSKIRKDVVEFRFPKWDERLDYLLEDQLQLLMVELDSKLDASKKRIEVLTENLEEAGSSQ
        MIASYKANCLHKRARKAF LLDFFSERKKK+E DMSK+RKDV+E RFPKWDERLD+L EDQL++LMV+LDSKLD  K+RIE++TEN EE  S +
Subjt:  MIASYKANCLHKRARKAFGLLDFFSERKKKIECDMSKIRKDVVEFRFPKWDERLDYLLEDQLQLLMVELDSKLDASKKRIEVLTENLEEAGSSQ

A0A6J1ICD8 agamous-like MADS-box protein AGL1034.8e-3277.66Show/hide
Query:  MIASYKANCLHKRARKAFGLLDFFSERKKKIECDMSKIRKDVVEFRFPKWDERLDYLLEDQLQLLMVELDSKLDASKKRIEVLTENLEEAGSSQ
        MIASYKANCLHKRARKAF LLDFFSERKKK+E DMSK+RKDV+E RFPKWDERLD+L EDQLQ+LMV+LDSKLD  K+RIE++T+N EE  S +
Subjt:  MIASYKANCLHKRARKAFGLLDFFSERKKKIECDMSKIRKDVVEFRFPKWDERLDYLLEDQLQLLMVELDSKLDASKKRIEVLTENLEEAGSSQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCGCTTCTTACAAGGCTAATTGTCTCCACAAACGAGCTCGCAAGGCTTTCGGTCTCCTTGACTTTTTCTCCGAGCGGAAGAAGAAGATTGAATGTGACATGTCAAA
GATTCGCAAGGACGTTGTAGAATTCAGGTTTCCAAAGTGGGATGAACGTCTCGACTATTTGTTGGAAGATCAGTTACAACTTCTAATGGTAGAGTTGGATTCAAAACTTG
ATGCCTCAAAGAAAAGAATTGAGGTCCTCACAGAGAATCTTGAGGAGGCCGGGAGCAGCCAACAACCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGATCGCTTCTTACAAGGCTAATTGTCTCCACAAACGAGCTCGCAAGGCTTTCGGTCTCCTTGACTTTTTCTCCGAGCGGAAGAAGAAGATTGAATGTGACATGTCAAA
GATTCGCAAGGACGTTGTAGAATTCAGGTTTCCAAAGTGGGATGAACGTCTCGACTATTTGTTGGAAGATCAGTTACAACTTCTAATGGTAGAGTTGGATTCAAAACTTG
ATGCCTCAAAGAAAAGAATTGAGGTCCTCACAGAGAATCTTGAGGAGGCCGGGAGCAGCCAACAACCCTAA
Protein sequenceShow/hide protein sequence
MIASYKANCLHKRARKAFGLLDFFSERKKKIECDMSKIRKDVVEFRFPKWDERLDYLLEDQLQLLMVELDSKLDASKKRIEVLTENLEEAGSSQQP