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Lag0034326 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0034326
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr3:6337612..6337989
RNA-Seq ExpressionLag0034326
SyntenyLag0034326
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_035662800.1 zinc finger protein 77-like [Branchiostoma floridae]5.1e-0430.77Show/hide
Query:  WTTESTSPHPDLRLCEPGPTSLPHLIWLENFHI---MRAWTTESTSPHPDLRLCEPGSTSLPHLIWLENFHI-MRAWTTKSTSPHPDLRLCEPGPTSLPH
        WT+ +T+P P  +   P   S P   W+        ++ WTT +T+P PD +   P   S P   WL      ++ WT  +T+P PD +   P   S P 
Subjt:  WTTESTSPHPDLRLCEPGPTSLPHLIWLENFHI---MRAWTTESTSPHPDLRLCEPGSTSLPHLIWLENFHI-MRAWTTKSTSPHPDLRLCEPGPTSLPH

Query:  LNWL
          WL
Subjt:  LNWL
XP_040190413.1 extensin-2-like [Rana temporaria]1.8e-0437.74Show/hide
Query:  SPHPDLRLCEPGPTSLPHLIWLENFHIMRAWTTEST--------SPHPDLRLCEPGSTSLPHLIWLENFHIMRAWTTKST--------SPHPDLRLCEPG
        SP P+LRL  P  TS  H I++     +R    +ST        SP P+LRL  P STS  H I+      +R   T+ST        SP P+LRL  P 
Subjt:  SPHPDLRLCEPGPTSLPHLIWLENFHIMRAWTTEST--------SPHPDLRLCEPGSTSLPHLIWLENFHIMRAWTTKST--------SPHPDLRLCEPG

Query:  PTSLPH
         TS  H
Subjt:  PTSLPH
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGAGCCTGGACTACCGAGTCTACCTCGCCTCATCCAGACTTGAGATTATGTGAGCCTGGACCAACGAGTCTACCTCACCTCATCTGGCTTGAGAATTTTCACATCAT
GCGAGCCTGGACTACCGAGTCTACCTCGCCTCATCCAGACTTGAGATTATGTGAGCCTGGATCAACGAGTCTACCTCACCTCATCTGGCTTGAGAATTTTCACATCATGC
GAGCCTGGACTACCAAGTCTACCTCGCCTCATCCAGACTTGAGATTATGTGAGCCTGGACCAACGAGTCTACCTCACCTCAACTGGCTTGAGCATCTCCACACCGGCGAG
CCTGGACTACCGAGTCTACCTCGCCTCATCCAGATTGAGATTACGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCGAGCCTGGACTACCGAGTCTACCTCGCCTCATCCAGACTTGAGATTATGTGAGCCTGGACCAACGAGTCTACCTCACCTCATCTGGCTTGAGAATTTTCACATCAT
GCGAGCCTGGACTACCGAGTCTACCTCGCCTCATCCAGACTTGAGATTATGTGAGCCTGGATCAACGAGTCTACCTCACCTCATCTGGCTTGAGAATTTTCACATCATGC
GAGCCTGGACTACCAAGTCTACCTCGCCTCATCCAGACTTGAGATTATGTGAGCCTGGACCAACGAGTCTACCTCACCTCAACTGGCTTGAGCATCTCCACACCGGCGAG
CCTGGACTACCGAGTCTACCTCGCCTCATCCAGATTGAGATTACGTGA
Protein sequenceShow/hide protein sequence
MRAWTTESTSPHPDLRLCEPGPTSLPHLIWLENFHIMRAWTTESTSPHPDLRLCEPGSTSLPHLIWLENFHIMRAWTTKSTSPHPDLRLCEPGPTSLPHLNWLEHLHTGE
PGLPSLPRLIQIEIT