; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0034358 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0034358
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionzinc finger Ran-binding domain-containing protein 2-like
Genome locationchr3:6632217..6633021
RNA-Seq ExpressionLag0034358
SyntenyLag0034358
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001876 - Zinc finger, RanBP2-type
IPR036443 - Zinc finger, RanBP2-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150016.3 zinc finger Ran-binding domain-containing protein 2 isoform X2 [Cucumis sativus]2.8e-8396.43Show/hide
Query:  MSWSGGDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCNAVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASI
        MSWS GDWICNVCQNVNFKKREACHRC YPKYGGPDPSTYSYNKTE LAGDWYC  VSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASI
Subjt:  MSWSGGDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCNAVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASI

Query:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGGAV
        PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGGAV
Subjt:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGGAV

XP_008465021.2 PREDICTED: uncharacterized protein LOC103502740 isoform X2 [Cucumis melo]2.8e-8396.43Show/hide
Query:  MSWSGGDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCNAVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASI
        MSWS GDWICNVCQNVNFKKREACHRC YPKYGGPDPSTYSYNKTE LAGDWYC  VSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASI
Subjt:  MSWSGGDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCNAVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASI

Query:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGGAV
        PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGGAV
Subjt:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGGAV

XP_022961068.1 zinc finger Ran-binding domain-containing protein 2-like [Cucurbita moschata]3.6e-8395.71Show/hide
Query:  MSWSGGDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCNAVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASI
        MSWS GDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYC AVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASI
Subjt:  MSWSGGDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCNAVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASI

Query:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGGAV
        PPGWKSGDW+CPR+GCG+HNYASRMECFKCKTPR FGGAV
Subjt:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGGAV

XP_023516205.1 zinc finger Ran-binding domain-containing protein 2-like [Cucurbita pepo subsp. pepo]8.1e-8395Show/hide
Query:  MSWSGGDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCNAVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASI
        MSWS GDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYC AV+CGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASI
Subjt:  MSWSGGDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCNAVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASI

Query:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGGAV
        PPGWKSGDW+CPR+GCG+HNYASRMECFKCKTPR FGGAV
Subjt:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGGAV

XP_038880145.1 zinc finger Ran-binding domain-containing protein 2-like isoform X2 [Benincasa hispida]1.8e-8295.71Show/hide
Query:  MSWSGGDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCNAVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASI
        MSWS GDWICNVCQNVNFKKREACHRC YPKYGGPDPSTYSYNKTE LAGDWYC   SCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASI
Subjt:  MSWSGGDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCNAVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASI

Query:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGGAV
        PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGGAV
Subjt:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGGAV

TrEMBL top hitse value%identityAlignment
A0A0A0LWE1 Uncharacterized protein1.4e-8396.43Show/hide
Query:  MSWSGGDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCNAVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASI
        MSWS GDWICNVCQNVNFKKREACHRC YPKYGGPDPSTYSYNKTE LAGDWYC  VSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASI
Subjt:  MSWSGGDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCNAVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASI

Query:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGGAV
        PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGGAV
Subjt:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGGAV

A0A1S3CMY6 uncharacterized protein LOC103502740 isoform X21.4e-8396.43Show/hide
Query:  MSWSGGDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCNAVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASI
        MSWS GDWICNVCQNVNFKKREACHRC YPKYGGPDPSTYSYNKTE LAGDWYC  VSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASI
Subjt:  MSWSGGDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCNAVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASI

Query:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGGAV
        PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGGAV
Subjt:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGGAV

A0A5D3E0T0 Zinc finger Ran-binding domain-containing protein 2-like isoform X31.4e-8396.43Show/hide
Query:  MSWSGGDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCNAVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASI
        MSWS GDWICNVCQNVNFKKREACHRC YPKYGGPDPSTYSYNKTE LAGDWYC  VSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASI
Subjt:  MSWSGGDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCNAVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASI

Query:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGGAV
        PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGGAV
Subjt:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGGAV

A0A6J1HCX6 zinc finger Ran-binding domain-containing protein 2-like1.8e-8395.71Show/hide
Query:  MSWSGGDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCNAVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASI
        MSWS GDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYC AVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASI
Subjt:  MSWSGGDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCNAVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASI

Query:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGGAV
        PPGWKSGDW+CPR+GCG+HNYASRMECFKCKTPR FGGAV
Subjt:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGGAV

A0A6J1JBM0 zinc finger Ran-binding domain-containing protein 2-like1.8e-8395.71Show/hide
Query:  MSWSGGDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCNAVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASI
        MSWS GDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYC AVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASI
Subjt:  MSWSGGDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCNAVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASI

Query:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGGAV
        PPGWKSGDW+CPR+GCG+HNYASRMECFKCKTPR FGGAV
Subjt:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGGAV

SwissProt top hitse value%identityAlignment
O13801 Uncharacterized RNA-binding protein C17H9.04c1.4e-0827.69Show/hide
Query:  GDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYN-KTEVLAGDWYCNAVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGW
        GDW C +C   NF++R +C RCS+P       +T S     +   G+ Y N  S    NY    +       +S      G   +              +
Subjt:  GDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYN-KTEVLAGDWYCNAVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGW

Query:  KSGDWICPRMGCGVHNYASRMECFKCKTPR
        ++GDW C   GCG HN+A  + C +C   R
Subjt:  KSGDWICPRMGCGVHNYASRMECFKCKTPR

O95218 Zinc finger Ran-binding domain-containing protein 25.4e-0537.08Show/hide
Query:  GDWYCNAVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMM--GSDQYGSD-ASIPPG-WKSGDWICPRMGCGVHNYASRMECFKCKTPR
        GDW C    CG  N+A R +C RCG  K+       A MM  G  + G   A    G + + DW C    C   N+A R EC  C TP+
Subjt:  GDWYCNAVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMM--GSDQYGSD-ASIPPG-WKSGDWICPRMGCGVHNYASRMECFKCKTPR

Q19QU3 Zinc finger Ran-binding domain-containing protein 25.4e-0537.08Show/hide
Query:  GDWYCNAVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMM--GSDQYGSD-ASIPPG-WKSGDWICPRMGCGVHNYASRMECFKCKTPR
        GDW C    CG  N+A R +C RCG  K+       A MM  G  + G   A    G + + DW C    C   N+A R EC  C TP+
Subjt:  GDWYCNAVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMM--GSDQYGSD-ASIPPG-WKSGDWICPRMGCGVHNYASRMECFKCKTPR

Q5ZLX5 Zinc finger Ran-binding domain-containing protein 21.1e-0538.2Show/hide
Query:  GDWYCNAVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMM--GSDQYGSD-ASIPPG-WKSGDWICPRMGCGVHNYASRMECFKCKTPR
        GDW C    CG  N+A R +C RCG  K+       A MM  G  + G   A    G + + DW C    CG  N+A R EC  C TP+
Subjt:  GDWYCNAVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMM--GSDQYGSD-ASIPPG-WKSGDWICPRMGCGVHNYASRMECFKCKTPR

Q9R020 Zinc finger Ran-binding domain-containing protein 25.4e-0537.08Show/hide
Query:  GDWYCNAVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMM--GSDQYGSD-ASIPPG-WKSGDWICPRMGCGVHNYASRMECFKCKTPR
        GDW C    CG  N+A R +C RCG  K+       A MM  G  + G   A    G + + DW C    C   N+A R EC  C TP+
Subjt:  GDWYCNAVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMM--GSDQYGSD-ASIPPG-WKSGDWICPRMGCGVHNYASRMECFKCKTPR

Arabidopsis top hitse value%identityAlignment
AT1G70650.1 Ran BP2/NZF zinc finger-like superfamily protein2.8e-0426.51Show/hide
Query:  GDWICNVCQNVNFKKREACHRCS-YPKYGGPDPSTYSYNKTEVLAGDWYCNAVSCGAHNYASRPNCFRC---GAFKSVYPGDY
        GDW C  C+ +NF K   C RC  + +           +   +  GDW C   +C   N++    C RC      + + PG++
Subjt:  GDWICNVCQNVNFKKREACHRCS-YPKYGGPDPSTYSYNKTEVLAGDWYCNAVSCGAHNYASRPNCFRC---GAFKSVYPGDY

AT2G17975.1 zinc finger (Ran-binding) family protein5.7e-1834.9Show/hide
Query:  GDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCNAVSCGAHNYASRPNCFRCGAFKSV-------YPG----------------
        GDW C  C+N N+  R  C+RC  P+    D +T   +K     GDW C    C  +NYASR  C +CG  K V        PG                
Subjt:  GDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCNAVSCGAHNYASRPNCFRCGAFKSV-------YPG----------------

Query:  -DYGAYMMGSDQYGSDASIPPGWKSGDWICPRMGCGVHNYASRMECFKC
         D    ++      + AS+   W+SGDWIC    CG HNY+SR++C KC
Subjt:  -DYGAYMMGSDQYGSDASIPPGWKSGDWICPRMGCGVHNYASRMECFKC

AT2G26695.1 Ran BP2/NZF zinc finger-like superfamily protein3.9e-5966.43Show/hide
Query:  MSWSGGDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCNAVSCGAHNYASRPNCFRCGAFKSVYPGD-YGAYMMGSDQYGSD-A
        MSW+GGDW+C  CQ+ NFKKRE+C +C YPK+GG D STY YN+TEV+AGDWYC A++CG+HNYASR +C+RCG  K  Y    YGA M+    YG+D A
Subjt:  MSWSGGDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCNAVSCGAHNYASRPNCFRCGAFKSVYPGD-YGAYMMGSDQYGSD-A

Query:  SIPPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGG
        + PPGWK+GDW+CPR+GCGVHNYASR ECFKCKT RD+GG
Subjt:  SIPPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGG

AT3G15680.1 Ran BP2/NZF zinc finger-like superfamily protein6.3e-3342.21Show/hide
Query:  GDWICNVCQNVNFKKREACHRC-------------SYPKYGGPDPSTYSYNK-TEVLAGDWYCNAVSCGAHNYASRPNCFRCGAFK-SVYPGDYGAYMMG
        GDW C  C ++NF++R++C RC              +  +GG   S + +   ++V  GDWYC   +CG HN+ASR  CF+CG FK     G  G  + G
Subjt:  GDWICNVCQNVNFKKREACHRC-------------SYPKYGGPDPSTYSYNK-TEVLAGDWYCNAVSCGAHNYASRPNCFRCGAFK-SVYPGDYGAYMMG

Query:  SDQYGSD--ASIPPG------WKSGDWICPRMGCGVHNYASRMECFKCKTPRDF
           + +D   S  PG      WKSGDWIC R+GC  HN+ASRMECF+C  PRDF
Subjt:  SDQYGSD--ASIPPG------WKSGDWICPRMGCGVHNYASRMECFKCKTPRDF

AT5G25490.1 Ran BP2/NZF zinc finger-like superfamily protein1.8e-3238.36Show/hide
Query:  GDWICNVCQNVNFKKREACHRCSYPKYGG------------PDPSTYSYNK-TEVLAGDWYCNAVSCGAHNYASRPNCFRCGAFKSVYPGD---------
        GDW C +C ++NF++R++C RC  P+ GG            P  S++ +N   +V  GDWYCN   CG HN+A+R +CF+CGA K  +            
Subjt:  GDWICNVCQNVNFKKREACHRCSYPKYGG------------PDPSTYSYNK-TEVLAGDWYCNAVSCGAHNYASRPNCFRCGAFKSVYPGD---------

Query:  -------YGAYMMGSDQYGSDASIPPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRD
                G +  G    G   +    WKSGDWICPR GC  HN+ASR ECF+C  P++
Subjt:  -------YGAYMMGSDQYGSDASIPPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCTGGTCAGGAGGAGACTGGATATGCAACGTTTGCCAGAACGTAAACTTCAAGAAAAGAGAAGCATGTCATCGTTGCAGTTACCCCAAGTATGGAGGCCCAGACCC
TTCAACTTACAGTTACAACAAGACGGAGGTGTTGGCCGGAGACTGGTACTGCAACGCCGTAAGCTGCGGAGCTCACAACTACGCCAGCCGCCCGAACTGCTTTAGATGTG
GTGCATTTAAGTCCGTCTATCCTGGTGATTATGGCGCCTACATGATGGGTTCCGATCAGTATGGATCTGATGCAAGCATCCCGCCTGGATGGAAATCTGGCGACTGGATT
TGCCCTAGAATGGGATGCGGAGTACATAATTATGCAAGCAGGATGGAGTGTTTTAAATGCAAAACACCAAGAGATTTCGGTGGTGCAGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGCTGGTCAGGAGGAGACTGGATATGCAACGTTTGCCAGAACGTAAACTTCAAGAAAAGAGAAGCATGTCATCGTTGCAGTTACCCCAAGTATGGAGGCCCAGACCC
TTCAACTTACAGTTACAACAAGACGGAGGTGTTGGCCGGAGACTGGTACTGCAACGCCGTAAGCTGCGGAGCTCACAACTACGCCAGCCGCCCGAACTGCTTTAGATGTG
GTGCATTTAAGTCCGTCTATCCTGGTGATTATGGCGCCTACATGATGGGTTCCGATCAGTATGGATCTGATGCAAGCATCCCGCCTGGATGGAAATCTGGCGACTGGATT
TGCCCTAGAATGGGATGCGGAGTACATAATTATGCAAGCAGGATGGAGTGTTTTAAATGCAAAACACCAAGAGATTTCGGTGGTGCAGTTTAA
Protein sequenceShow/hide protein sequence
MSWSGGDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCNAVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWI
CPRMGCGVHNYASRMECFKCKTPRDFGGAV