; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0034370 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0034370
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr3:6741469..6742185
RNA-Seq ExpressionLag0034370
SyntenyLag0034370
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022140628.1 uncharacterized protein LOC111011237 [Momordica charantia]3.6e-1434.46Show/hide
Query:  WMAPERNTYKVNTDAS--VKDGVLGRGVIIRNKDGEVMVAAQSVGPFLGSIEMAEALAIREGVELAKSTGIHPIWVETDSLLVWQLFQGIESYENETQNI
        W+ P++  YK+NTDAS    D   G G+IIRN  G+VM +A      + S++MAEA+   EG++LA   G++P+ +ETDS  ++ LF       +ET  I
Subjt:  WMAPERNTYKVNTDAS--VKDGVLGRGVIIRNKDGEVMVAAQSVGPFLGSIEMAEALAIREGVELAKSTGIHPIWVETDSLLVWQLFQGIESYENETQNI

Query:  IEDIKFYRNSGDLKGLLLTSRESNQSANALVVHARSNRVDGVWIEEAP
        +   K +             RE N++A+ L   A   R   +W+E+ P
Subjt:  IEDIKFYRNSGDLKGLLLTSRESNQSANALVVHARSNRVDGVWIEEAP

XP_023885847.1 keratin, type I cytoskeletal 13-like [Quercus suber]2.1e-1429.02Show/hide
Query:  WAMWNDWNFKIHNPDKITNDDPIPKALNYLDEFKATSIKENHVRNSTEQNRRNLPATDLANTRNVPDQTARWMAPERNTYKVNTDASVKDGV--LGRGVI
        W +WN  N  +H    +       +AL+YLDE+     K++HV+              LA T  +      W  P  +TYK+N DA++   +   G G I
Subjt:  WAMWNDWNFKIHNPDKITNDDPIPKALNYLDEFKATSIKENHVRNSTEQNRRNLPATDLANTRNVPDQTARWMAPERNTYKVNTDASVKDGV--LGRGVI

Query:  IRNKDGEVMVAAQSVGPFLGSIEMAEALAIREGVELAKSTGIHPIWVETDSLLVWQLFQGIESYENETQNIIEDIKFYRNSGDLKGLLLTSRESNQSANA
        IRN++GEVM      GP   +   AEALA R+ V+ A   G   + +E D+ LV           +   +I EDI+          +    R+ N  A++
Subjt:  IRNKDGEVMVAAQSVGPFLGSIEMAEALAIREGVELAKSTGIHPIWVETDSLLVWQLFQGIESYENETQNIIEDIKFYRNSGDLKGLLLTSRESNQSANA

Query:  LVVHARSNRVDGVWIEEAPSWAMS
        L  HAR+   +  W+E++P  A++
Subjt:  LVVHARSNRVDGVWIEEAPSWAMS

XP_024037110.1 uncharacterized protein LOC112097050 [Citrus clementina]1.0e-1631.98Show/hide
Query:  ILWAMWNDWNFKIHNPDKITNDDPIPKALNYLDEFKATSIKENHVRNSTEQNRRNLPATDLANTRNVPDQTARWMAPERNTYKVNTDASV--KDGVLGRG
        + W++W   N  ++   +      + +A+  L+  KA                  LP   +A  +  P Q A W  P+   YK+NTDA++  + GV G G
Subjt:  ILWAMWNDWNFKIHNPDKITNDDPIPKALNYLDEFKATSIKENHVRNSTEQNRRNLPATDLANTRNVPDQTARWMAPERNTYKVNTDASV--KDGVLGRG

Query:  VIIRNKDGEVMVAAQSVGPFLGSIEMAEALAIREGVELAKSTGIHPIWVETDSL-LVWQLFQGIESYENETQNIIEDIKFYRNSGDLKGLLLTSRESNQS
         IIRN  G VM A  S  P+ G +E+AEALAI EG++LA    + P  +E+DS  +V  + +GI S   E   I+ +I+      +      T    N  
Subjt:  VIIRNKDGEVMVAAQSVGPFLGSIEMAEALAIREGVELAKSTGIHPIWVETDSL-LVWQLFQGIESYENETQNIIEDIKFYRNSGDLKGLLLTSRESNQS

Query:  ANALVVHARSNRVDGVWIEEAP
        A+AL   A SN    VWI+E P
Subjt:  ANALVVHARSNRVDGVWIEEAP

XP_030931246.1 uncharacterized protein LOC115957168 [Quercus lobata]2.1e-1427.47Show/hide
Query:  ILWAMWNDWNF--KIHNPDKITNDDPIPKALNYLDEFKATSIKENHVRNSTEQNRRNLPATDLANTRNVPDQTARWMAPERNTYKVNTDASV-KDG-VLG
        ++W   N   F   I +P ++     + +A  YL+EFK + ++                   LA +  V  +++RW+ P   +YK+N DA++ +DG   G
Subjt:  ILWAMWNDWNF--KIHNPDKITNDDPIPKALNYLDEFKATSIKENHVRNSTEQNRRNLPATDLANTRNVPDQTARWMAPERNTYKVNTDASV-KDG-VLG

Query:  RGVIIRNKDGEVMVAAQSVGPFLGSIEMAEALAIREGVELAKSTGIHPIWVETDSLLVWQLFQGIESYENETQNIIEDIKFYRNSGDLKGLLLTSRESNQ
         GV+IRN  GEVM A  + GP +   E AE LA R+ +E A  +G   + +E D+ +V  +      +++   ++  D+        +  L   +R +N 
Subjt:  RGVIIRNKDGEVMVAAQSVGPFLGSIEMAEALAIREGVELAKSTGIHPIWVETDSLLVWQLFQGIESYENETQNIIEDIKFYRNSGDLKGLLLTSRESNQ

Query:  SANALVVHARSNRVDGVWIEEAPSWAMSFVRFD
         A++L   A+    D +W EE+P  A+  + FD
Subjt:  SANALVVHARSNRVDGVWIEEAPSWAMSFVRFD

XP_030959109.1 uncharacterized protein LOC115981060 [Quercus lobata]1.2e-1431.36Show/hide
Query:  WAMWNDWNFKIHNPDKITNDDPIPKALNYLDEFKATSIKENHVRNSTEQNRRNLPATDLANTRNVPDQTARWMAPERNTYKVNTDASV--KDGVLGRGVI
        W++WN+ N   H        +   +A  Y+DEF                  RN   +DL   +  P    +W  P  N YK+N D +V  + G +G GV+
Subjt:  WAMWNDWNFKIHNPDKITNDDPIPKALNYLDEFKATSIKENHVRNSTEQNRRNLPATDLANTRNVPDQTARWMAPERNTYKVNTDASV--KDGVLGRGVI

Query:  IRNKDGEVMVA-AQSVGPFLGSIEMAEALAIREGVELAKSTGIHPIWVETDSLLVWQLFQGIESYENETQNIIEDIKFYRNSGDLKGLLLTSRESNQSAN
        IRN  GEV  A ++ +   LG+IE AE  A+ EGV LA   G+  + VE DSL V Q   G+ +     Q + E I ++    D   +L T R SN +A+
Subjt:  IRNKDGEVMVA-AQSVGPFLGSIEMAEALAIREGVELAKSTGIHPIWVETDSLLVWQLFQGIESYENETQNIIEDIKFYRNSGDLKGLLLTSRESNQSAN

Query:  ALVVHARSNRVDGVWIEEAP
         +   A+      +W+E++P
Subjt:  ALVVHARSNRVDGVWIEEAP

TrEMBL top hitse value%identityAlignment
A0A1S8ABJ9 Ribonuclease H-like superfamily protein (Fragment)4.9e-1731.98Show/hide
Query:  ILWAMWNDWNFKIHNPDKITNDDPIPKALNYLDEFKATSIKENHVRNSTEQNRRNLPATDLANTRNVPDQTARWMAPERNTYKVNTDASV--KDGVLGRG
        + W++W   N  ++   +      + +A+  L+  KA                  LP   +A  +  P Q A W  P+   YK+NTDA++  + GV G G
Subjt:  ILWAMWNDWNFKIHNPDKITNDDPIPKALNYLDEFKATSIKENHVRNSTEQNRRNLPATDLANTRNVPDQTARWMAPERNTYKVNTDASV--KDGVLGRG

Query:  VIIRNKDGEVMVAAQSVGPFLGSIEMAEALAIREGVELAKSTGIHPIWVETDSL-LVWQLFQGIESYENETQNIIEDIKFYRNSGDLKGLLLTSRESNQS
         IIRN  G VM A  S  P+ G +E+AEALAI EG++LA    + P  +E+DS  +V  + +GI S   E   I+ +I+      +      T    N  
Subjt:  VIIRNKDGEVMVAAQSVGPFLGSIEMAEALAIREGVELAKSTGIHPIWVETDSL-LVWQLFQGIESYENETQNIIEDIKFYRNSGDLKGLLLTSRESNQS

Query:  ANALVVHARSNRVDGVWIEEAP
        A+AL   A SN    VWI+E P
Subjt:  ANALVVHARSNRVDGVWIEEAP

A0A2N9ECP4 RNase H domain-containing protein3.9e-1430.18Show/hide
Query:  MILWAMWNDWNFKIHNPDKITNDDPIPKALNYLDEFKATSIKENHVRNSTEQNRRNLPATDLANTRNVPDQTARWMAPERNTYKVNTDASV--KDGVLGR
        M+ W++W   N    N    T    + +    L E+              E   + +P    A  +N    TARW  PE    K+N D +V    G  G 
Subjt:  MILWAMWNDWNFKIHNPDKITNDDPIPKALNYLDEFKATSIKENHVRNSTEQNRRNLPATDLANTRNVPDQTARWMAPERNTYKVNTDASV--KDGVLGR

Query:  GVIIRNKDGEVMVAAQSVGPFLGSIEMAEALAIREGVELAKSTGIHPIWVETDSLLVWQLFQGIESYENETQNIIEDIKFYRNSGDLKGLLLTSRESNQS
        GVIIRN  G VM +     PF  S+E  EA A R  V+LA   G   + VE DS+ +       E+      +II D KF   S      +   R+ N+ 
Subjt:  GVIIRNKDGEVMVAAQSVGPFLGSIEMAEALAIREGVELAKSTGIHPIWVETDSLLVWQLFQGIESYENETQNIIEDIKFYRNSGDLKGLLLTSRESNQS

Query:  ANALVVHARSNRVDGVWIEEAP
        A++L   AR N++  VW+E  P
Subjt:  ANALVVHARSNRVDGVWIEEAP

A0A6J1CIF1 uncharacterized protein LOC1110112371.7e-1434.46Show/hide
Query:  WMAPERNTYKVNTDAS--VKDGVLGRGVIIRNKDGEVMVAAQSVGPFLGSIEMAEALAIREGVELAKSTGIHPIWVETDSLLVWQLFQGIESYENETQNI
        W+ P++  YK+NTDAS    D   G G+IIRN  G+VM +A      + S++MAEA+   EG++LA   G++P+ +ETDS  ++ LF       +ET  I
Subjt:  WMAPERNTYKVNTDAS--VKDGVLGRGVIIRNKDGEVMVAAQSVGPFLGSIEMAEALAIREGVELAKSTGIHPIWVETDSLLVWQLFQGIESYENETQNI

Query:  IEDIKFYRNSGDLKGLLLTSRESNQSANALVVHARSNRVDGVWIEEAP
        +   K +             RE N++A+ L   A   R   +W+E+ P
Subjt:  IEDIKFYRNSGDLKGLLLTSRESNQSANALVVHARSNRVDGVWIEEAP

A0A803PJK4 Uncharacterized protein3.5e-1527.95Show/hide
Query:  ILWAMWNDWNFKIHNPDKITNDDPIPKALNYLDEFKAT-SIKENHVRNSTEQNRRNLPATDLANTRNVPDQTARWMAPERNTYKVNTDASVK--DGVLGR
        ILW++W + N + H      ++  +  AL+YL E++ +      H+RN   +N             N P    +W+ P     K+NTDA+V   + + G 
Subjt:  ILWAMWNDWNFKIHNPDKITNDDPIPKALNYLDEFKAT-SIKENHVRNSTEQNRRNLPATDLANTRNVPDQTARWMAPERNTYKVNTDASVK--DGVLGR

Query:  GVIIRNKDGEVMVAAQSVGPFLGSIEMAEALAIREGVELAKSTGIHPIWVETDSLLVWQLFQGIESYENETQNIIEDIKFYRNSGDLKGLLLTSRESNQS
        G I+R+ DG+V+ A     P     E+ EALA+R  ++  +S  +   ++ETDSLLV +  Q      ++  +++ DI    ++     +    R +N  
Subjt:  GVIIRNKDGEVMVAAQSVGPFLGSIEMAEALAIREGVELAKSTGIHPIWVETDSLLVWQLFQGIESYENETQNIIEDIKFYRNSGDLKGLLLTSRESNQS

Query:  ANALVVHARSNRVDGVWIEEAPSWAMSFV
        A+ L  +A S   + VW+EE P   M+ V
Subjt:  ANALVVHARSNRVDGVWIEEAPSWAMSFV

A0A803PM29 Uncharacterized protein6.0e-1527.07Show/hide
Query:  ILWAMWNDWNFKIHNPDKITNDDPIPKALNYLDEFKAT-SIKENHVRNSTEQNRRNLPATDLANTRNVPDQTARWMAPERNTYKVNTDASVK--DGVLGR
        ILW++W + N + H      N+  +  A++YL E++A+      H+RN   +N             N P    +W+ P  +  K+NTDA+V   + +   
Subjt:  ILWAMWNDWNFKIHNPDKITNDDPIPKALNYLDEFKAT-SIKENHVRNSTEQNRRNLPATDLANTRNVPDQTARWMAPERNTYKVNTDASVK--DGVLGR

Query:  GVIIRNKDGEVMVAAQSVGPFLGSIEMAEALAIREGVELAKSTGIHPIWVETDSLLVWQLFQGIESYENETQNIIEDIKFYRNSGDLKGLLLTSRESNQS
        G I+R+ DG+V+       P     E+ EALA+R  ++  +S  +   ++ETDSLLV +  Q      ++  +++ DI    ++     +    R +N  
Subjt:  GVIIRNKDGEVMVAAQSVGPFLGSIEMAEALAIREGVELAKSTGIHPIWVETDSLLVWQLFQGIESYENETQNIIEDIKFYRNSGDLKGLLLTSRESNQS

Query:  ANALVVHARSNRVDGVWIEEAPSWAMSFV
        A+ L  +A S   + +W+EE P   M+ V
Subjt:  ANALVVHARSNRVDGVWIEEAPSWAMSFV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G27870.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.2e-0423.12Show/hide
Query:  DQTARWMAPERNTYKVNTDASVKDGVL--GRGVIIRNKDGEVMVAAQSVGPFLGSIEMAEALAIREGVELAKSTGIHPIWVETDSLLVWQLFQGIESYEN
        D   RW  PER   K N D S  +G +    G ++R+ +G  ++A Q++G  + +   +E  A+   ++   S G   +  E D+ +++ L  G + Y  
Subjt:  DQTARWMAPERNTYKVNTDASVKDGVL--GRGVIIRNKDGEVMVAAQSVGPFLGSIEMAEALAIREGVELAKSTGIHPIWVETDSLLVWQLFQGIESYEN

Query:  ETQNIIEDIKFYRNSGDLKGLLLTSRESNQSANALVVHARSNR---VDGVWIEEAPSWAM
           N I DI ++    +        R  N  A+ L      N+   ++  W+    ++A+
Subjt:  ETQNIIEDIKFYRNSGDLKGLLLTSRESNQSANALVVHARSNR---VDGVWIEEAPSWAM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTCTATGGGCGATGTGGAATGATTGGAATTTCAAAATCCATAACCCAGACAAAATCACAAATGACGATCCTATTCCTAAAGCTTTAAACTACCTGGACGAATTCAA
AGCAACAAGCATAAAGGAGAATCATGTAAGGAATAGCACAGAACAGAATAGAAGGAACCTACCAGCAACGGACTTAGCCAATACAAGAAATGTTCCAGATCAGACAGCGA
GGTGGATGGCGCCAGAAAGGAATACTTACAAGGTTAATACTGATGCTTCTGTCAAAGACGGAGTGCTTGGCAGGGGAGTGATTATTCGAAACAAAGATGGAGAAGTGATG
GTAGCAGCTCAGTCAGTGGGTCCATTTTTGGGATCGATCGAAATGGCAGAAGCTCTAGCCATCCGTGAAGGAGTAGAATTAGCAAAATCAACGGGCATCCATCCAATTTG
GGTGGAAACCGATTCGCTCCTAGTGTGGCAACTGTTTCAAGGAATCGAAAGCTATGAGAATGAAACTCAGAATATTATTGAGGACATCAAATTCTATAGAAATTCAGGAG
ACTTGAAAGGGTTGCTTCTTACCTCTAGAGAGTCGAATCAATCTGCCAACGCGCTTGTCGTTCATGCCCGAAGCAATCGAGTCGATGGTGTCTGGATTGAAGAAGCCCCC
TCCTGGGCGATGTCATTCGTCAGGTTCGACGGGGGAGAAGGAAGAGCGGAAGACTGA
mRNA sequenceShow/hide mRNA sequence
ATGATTCTATGGGCGATGTGGAATGATTGGAATTTCAAAATCCATAACCCAGACAAAATCACAAATGACGATCCTATTCCTAAAGCTTTAAACTACCTGGACGAATTCAA
AGCAACAAGCATAAAGGAGAATCATGTAAGGAATAGCACAGAACAGAATAGAAGGAACCTACCAGCAACGGACTTAGCCAATACAAGAAATGTTCCAGATCAGACAGCGA
GGTGGATGGCGCCAGAAAGGAATACTTACAAGGTTAATACTGATGCTTCTGTCAAAGACGGAGTGCTTGGCAGGGGAGTGATTATTCGAAACAAAGATGGAGAAGTGATG
GTAGCAGCTCAGTCAGTGGGTCCATTTTTGGGATCGATCGAAATGGCAGAAGCTCTAGCCATCCGTGAAGGAGTAGAATTAGCAAAATCAACGGGCATCCATCCAATTTG
GGTGGAAACCGATTCGCTCCTAGTGTGGCAACTGTTTCAAGGAATCGAAAGCTATGAGAATGAAACTCAGAATATTATTGAGGACATCAAATTCTATAGAAATTCAGGAG
ACTTGAAAGGGTTGCTTCTTACCTCTAGAGAGTCGAATCAATCTGCCAACGCGCTTGTCGTTCATGCCCGAAGCAATCGAGTCGATGGTGTCTGGATTGAAGAAGCCCCC
TCCTGGGCGATGTCATTCGTCAGGTTCGACGGGGGAGAAGGAAGAGCGGAAGACTGA
Protein sequenceShow/hide protein sequence
MILWAMWNDWNFKIHNPDKITNDDPIPKALNYLDEFKATSIKENHVRNSTEQNRRNLPATDLANTRNVPDQTARWMAPERNTYKVNTDASVKDGVLGRGVIIRNKDGEVM
VAAQSVGPFLGSIEMAEALAIREGVELAKSTGIHPIWVETDSLLVWQLFQGIESYENETQNIIEDIKFYRNSGDLKGLLLTSRESNQSANALVVHARSNRVDGVWIEEAP
SWAMSFVRFDGGEGRAED