; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0034398 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0034398
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptiontudor domain-containing protein 3
Genome locationchr3:7020830..7022103
RNA-Seq ExpressionLag0034398
SyntenyLag0034398
Gene Ontology termsNA
InterPro domainsIPR033472 - RecQ mediated genome instability protein, DUF1767
IPR042470 - RecQ mediated genome instability protein, N-terminal, subdomain 2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589889.1 Protein PGR, partial [Cucurbita argyrosperma subsp. sororia]1.1e-5776.4Show/hide
Query:  MEDASVAVLETLRVRGWNFGDLDEVRATIMIANALADDPSSVVDSVESELINMDLRSIGGKSLPEPALLRKSSRILGPMVLQISSVKDISRSSLDGMLKA
        M DASV+VLETLRVRGWNFGDLDEVRA IMI +ALADDP+SVVDSVESELINMDLRSIGGKSLP+ +LLRKSSR+LGP+VLQISSV+DISRSSLDGM KA
Subjt:  MEDASVAVLETLRVRGWNFGDLDEVRATIMIANALADDPSSVVDSVESELINMDLRSIGGKSLPEPALLRKSSRILGPMVLQISSVKDISRSSLDGMLKA

Query:  SNGRRLLRFGLTDGQTEITAVEYSHIPSIPDDIPLAPRTSSLSAYPMLFNL--LQSKGSSI
        SN RRLLRFGLTDG TEITA+EYSHIPSIPDDIP   +    +  P+   +  L SKG ++
Subjt:  SNGRRLLRFGLTDGQTEITAVEYSHIPSIPDDIPLAPRTSSLSAYPMLFNL--LQSKGSSI

KAG7023559.1 Tudor domain-containing protein 3 [Cucurbita argyrosperma subsp. argyrosperma]8.4e-5880.26Show/hide
Query:  MEDASVAVLETLRVRGWNFGDLDEVRATIMIANALADDPSSVVDSVESELINMDLRSIGGKSLPEPALLRKSSRILGPMVLQISSVKDISRSSLDGMLKA
        M DASV+VLETLRVRGWNFGDLDEVRA IMI +ALADDP+SVVDSVESELINMDLRSIGGKSLP+ +LLRKSSR+LGP+VLQISSV+DISRSSLDGM KA
Subjt:  MEDASVAVLETLRVRGWNFGDLDEVRATIMIANALADDPSSVVDSVESELINMDLRSIGGKSLPEPALLRKSSRILGPMVLQISSVKDISRSSLDGMLKA

Query:  SNGRRLLRFGLTDGQTEITAVEYSHIPSIPDDIPLAPRTSSLSAYPMLFNLL
        SN RRLLRFGLTDG TEITA+EYSHIPSIPDDIP   +   + +  M F LL
Subjt:  SNGRRLLRFGLTDGQTEITAVEYSHIPSIPDDIPLAPRTSSLSAYPMLFNLL

XP_022961249.1 tudor domain-containing protein 3 [Cucurbita moschata]1.1e-5776.4Show/hide
Query:  MEDASVAVLETLRVRGWNFGDLDEVRATIMIANALADDPSSVVDSVESELINMDLRSIGGKSLPEPALLRKSSRILGPMVLQISSVKDISRSSLDGMLKA
        M DASV+VLETLRVRGWNFGDLDEVRA IMI +ALADDP+SVVDSVESELINMDLRSIGGKSLP+ +LLRKSSR+LGP+VLQISSV+DISRSSLDGM KA
Subjt:  MEDASVAVLETLRVRGWNFGDLDEVRATIMIANALADDPSSVVDSVESELINMDLRSIGGKSLPEPALLRKSSRILGPMVLQISSVKDISRSSLDGMLKA

Query:  SNGRRLLRFGLTDGQTEITAVEYSHIPSIPDDIPLAPRTSSLSAYPMLFNL--LQSKGSSI
        SN RRLLRFGLTDG TEITA+EYSHIPSIPDDIP   +    +  P+   +  L SKG ++
Subjt:  SNGRRLLRFGLTDGQTEITAVEYSHIPSIPDDIPLAPRTSSLSAYPMLFNL--LQSKGSSI

XP_023516947.1 tudor domain-containing protein 3 [Cucurbita pepo subsp. pepo]2.4e-5776.4Show/hide
Query:  MEDASVAVLETLRVRGWNFGDLDEVRATIMIANALADDPSSVVDSVESELINMDLRSIGGKSLPEPALLRKSSRILGPMVLQISSVKDISRSSLDGMLKA
        M DASVAVLETLRVRGWNF DLDEVRA IMI +ALADDP+SVVDSVESELINMDLRSIGGKSLP+ +LLRKSSR+LGP+VLQISSV+DISRSSLDGM KA
Subjt:  MEDASVAVLETLRVRGWNFGDLDEVRATIMIANALADDPSSVVDSVESELINMDLRSIGGKSLPEPALLRKSSRILGPMVLQISSVKDISRSSLDGMLKA

Query:  SNGRRLLRFGLTDGQTEITAVEYSHIPSIPDDIPLAPRTSSLSAYPMLFNL--LQSKGSSI
        SN RRLLRFGLTDG TEITA+EYSHIPSIPDDIP   +    +  P+   +  L SKG ++
Subjt:  SNGRRLLRFGLTDGQTEITAVEYSHIPSIPDDIPLAPRTSSLSAYPMLFNL--LQSKGSSI

XP_038878431.1 tudor domain-containing protein 3 [Benincasa hispida]2.8e-6181.37Show/hide
Query:  MEDASVAVLETLRVRGWNFGDLDEVRATIMIANALADDPSSVVDSVESELINMDLRSIGGKSLPEPALLRKSSRILGPMVLQISSVKDISRSSLDGMLKA
        M DASVAVLETLR+RGWNFGDLDEVRA IMI +ALADDPSSVVDSVESELINMDLRSIGGKSLPEPALLRKSSRILGP+VLQISSVKDISRSSLDG+LKA
Subjt:  MEDASVAVLETLRVRGWNFGDLDEVRATIMIANALADDPSSVVDSVESELINMDLRSIGGKSLPEPALLRKSSRILGPMVLQISSVKDISRSSLDGMLKA

Query:  SNGRRLLRFGLTDGQTEITAVEYSHIPSIPDDIPLAPRTSSLSAYPMLFNL--LQSKGSSI
        SNGRRLLRFGLTDG TEITA+EYSHIPSIPDDIP   +    +  P+   +  L SKG S+
Subjt:  SNGRRLLRFGLTDGQTEITAVEYSHIPSIPDDIPLAPRTSSLSAYPMLFNL--LQSKGSSI

TrEMBL top hitse value%identityAlignment
A0A0A0LUB7 DUF1767 domain-containing protein1.7e-5687.31Show/hide
Query:  MEDASVAVLETLRVRGWNFGDLDEVRATIMIANALADDPSSVVDSVESELINMDLRSIGGKSLPEPALLRKSSRILGPMVLQISSVKDISRSSLDGMLKA
        M DASVAVLETLR+RGWNF D DEV+A I IA ALADDPSSV+DSVESELIN+DLR IGGKSLPEPAL RKSSRILGP+VLQISSVKDISRSSLDG+LKA
Subjt:  MEDASVAVLETLRVRGWNFGDLDEVRATIMIANALADDPSSVVDSVESELINMDLRSIGGKSLPEPALLRKSSRILGPMVLQISSVKDISRSSLDGMLKA

Query:  SNGRRLLRFGLTDGQTEITAVEYSHIPSIPDDIP
        SNGRRLLRFGLTDG +EITA+EYSHIPSIPDDIP
Subjt:  SNGRRLLRFGLTDGQTEITAVEYSHIPSIPDDIP

A0A1S3CJF1 tudor domain-containing protein 3 isoform X25.8e-5788.06Show/hide
Query:  MEDASVAVLETLRVRGWNFGDLDEVRATIMIANALADDPSSVVDSVESELINMDLRSIGGKSLPEPALLRKSSRILGPMVLQISSVKDISRSSLDGMLKA
        M DASVAVLETLR+RGWNF D DEV+A IMI +ALADDPSSVVDSVESELINMDLRSIGGKSL EPALLRKSSRILGP+VLQISSVKDISRSSLDG+LKA
Subjt:  MEDASVAVLETLRVRGWNFGDLDEVRATIMIANALADDPSSVVDSVESELINMDLRSIGGKSLPEPALLRKSSRILGPMVLQISSVKDISRSSLDGMLKA

Query:  SNGRRLLRFGLTDGQTEITAVEYSHIPSIPDDIP
        SNGRRLLRFGLTDG +E+TA+EYSHIP IPDDIP
Subjt:  SNGRRLLRFGLTDGQTEITAVEYSHIPSIPDDIP

A0A1S4E471 tudor domain-containing protein 3 isoform X15.8e-5788.06Show/hide
Query:  MEDASVAVLETLRVRGWNFGDLDEVRATIMIANALADDPSSVVDSVESELINMDLRSIGGKSLPEPALLRKSSRILGPMVLQISSVKDISRSSLDGMLKA
        M DASVAVLETLR+RGWNF D DEV+A IMI +ALADDPSSVVDSVESELINMDLRSIGGKSL EPALLRKSSRILGP+VLQISSVKDISRSSLDG+LKA
Subjt:  MEDASVAVLETLRVRGWNFGDLDEVRATIMIANALADDPSSVVDSVESELINMDLRSIGGKSLPEPALLRKSSRILGPMVLQISSVKDISRSSLDGMLKA

Query:  SNGRRLLRFGLTDGQTEITAVEYSHIPSIPDDIP
        SNGRRLLRFGLTDG +E+TA+EYSHIP IPDDIP
Subjt:  SNGRRLLRFGLTDGQTEITAVEYSHIPSIPDDIP

A0A5D3BLA9 Tudor domain-containing protein 3 isoform X25.8e-5788.06Show/hide
Query:  MEDASVAVLETLRVRGWNFGDLDEVRATIMIANALADDPSSVVDSVESELINMDLRSIGGKSLPEPALLRKSSRILGPMVLQISSVKDISRSSLDGMLKA
        M DASVAVLETLR+RGWNF D DEV+A IMI +ALADDPSSVVDSVESELINMDLRSIGGKSL EPALLRKSSRILGP+VLQISSVKDISRSSLDG+LKA
Subjt:  MEDASVAVLETLRVRGWNFGDLDEVRATIMIANALADDPSSVVDSVESELINMDLRSIGGKSLPEPALLRKSSRILGPMVLQISSVKDISRSSLDGMLKA

Query:  SNGRRLLRFGLTDGQTEITAVEYSHIPSIPDDIP
        SNGRRLLRFGLTDG +E+TA+EYSHIP IPDDIP
Subjt:  SNGRRLLRFGLTDGQTEITAVEYSHIPSIPDDIP

A0A6J1HDH5 tudor domain-containing protein 35.3e-5876.4Show/hide
Query:  MEDASVAVLETLRVRGWNFGDLDEVRATIMIANALADDPSSVVDSVESELINMDLRSIGGKSLPEPALLRKSSRILGPMVLQISSVKDISRSSLDGMLKA
        M DASV+VLETLRVRGWNFGDLDEVRA IMI +ALADDP+SVVDSVESELINMDLRSIGGKSLP+ +LLRKSSR+LGP+VLQISSV+DISRSSLDGM KA
Subjt:  MEDASVAVLETLRVRGWNFGDLDEVRATIMIANALADDPSSVVDSVESELINMDLRSIGGKSLPEPALLRKSSRILGPMVLQISSVKDISRSSLDGMLKA

Query:  SNGRRLLRFGLTDGQTEITAVEYSHIPSIPDDIPLAPRTSSLSAYPMLFNL--LQSKGSSI
        SN RRLLRFGLTDG TEITA+EYSHIPSIPDDIP   +    +  P+   +  L SKG ++
Subjt:  SNGRRLLRFGLTDGQTEITAVEYSHIPSIPDDIPLAPRTSSLSAYPMLFNL--LQSKGSSI

SwissProt top hitse value%identityAlignment
Q5ZMS6 Tudor domain-containing protein 34.5e-0636.9Show/hide
Query:  INMDLRSIGGKSLPEPALLRKSSRILGPMVLQISSVKDISRSSLDGMLKASNGRRLLRFGLTDGQTEITAVEYSHIPSIPDDIP
        +N DLR+IG K LP      K  ++ GP VLQI  ++++S    +   +A+   R+LR  +TDG T  TA+EY+ +  I  + P
Subjt:  INMDLRSIGGKSLPEPALLRKSSRILGPMVLQISSVKDISRSSLDGMLKASNGRRLLRFGLTDGQTEITAVEYSHIPSIPDDIP

Q6NYG6 Tudor domain-containing protein 39.4e-0427.68Show/hide
Query:  INMDLRSIGGKSLPEPALLRKSSRILGPMVLQISSVKDISRSSLDGMLKASNGRRLLRFGLTDGQTEITAVEYSHIPSIPDDIPLAPRTSSLSAYPMLFN
        +N DLR IG   LP      +  ++ GP VLQ+  +++++ S      +A+   R+LR  +TDG T  T +E+  +  I  + P   +   L    +   
Subjt:  INMDLRSIGGKSLPEPALLRKSSRILGPMVLQISSVKDISRSSLDGMLKASNGRRLLRFGLTDGQTEITAVEYSHIPSIPDDIPLAPRTSSLSAYPMLFN

Query:  LLQSKGSSIHFL
        +L    S I  L
Subjt:  LLQSKGSSIHFL

Q6P1U3 Tudor domain-containing protein 31.7e-0536.9Show/hide
Query:  INMDLRSIGGKSLPEPALLRKSSRILGPMVLQISSVKDISRSSLDGMLKASNGRRLLRFGLTDGQTEITAVEYSHIPSIPDDIP
        +N DLR+ G K LP      K  ++ GP VLQI  +++IS    +   +A+   R+LR  LTDG T  TA+E +++  I  + P
Subjt:  INMDLRSIGGKSLPEPALLRKSSRILGPMVLQISSVKDISRSSLDGMLKASNGRRLLRFGLTDGQTEITAVEYSHIPSIPDDIP

Q91W18 Tudor domain-containing protein 32.0e-0639.29Show/hide
Query:  INMDLRSIGGKSLPEPALLRKSSRILGPMVLQISSVKDISRSSLDGMLKASNGRRLLRFGLTDGQTEITAVEYSHIPSIPDDIP
        +N DLR+IG K LP      K  ++ GP VLQI  V++++    +   +A+   R+LR  +TDG T  TAVE+S+I  I  + P
Subjt:  INMDLRSIGGKSLPEPALLRKSSRILGPMVLQISSVKDISRSSLDGMLKASNGRRLLRFGLTDGQTEITAVEYSHIPSIPDDIP

Arabidopsis top hitse value%identityAlignment
AT5G19950.1 Domain of unknown function (DUF1767)2.3e-2947.29Show/hide
Query:  VLETLRVRGWNFGDLDEVRATIMIANAL---ADDPSSVVDSVESELINMDLRSIGGKSLPEPALLRKSSRILGPMVLQISSVKDISRSSLDGMLKASNGR
        V+  L  RGW F D++ +++ +   ++L    +   ++V+SVE+EL+NMD++ IGGKSLP+P  LR+ S + GP VLQIS V+D++RSS +  + +S G+
Subjt:  VLETLRVRGWNFGDLDEVRATIMIANAL---ADDPSSVVDSVESELINMDLRSIGGKSLPEPALLRKSSRILGPMVLQISSVKDISRSSLDGMLKASNGR

Query:  RLLRFGLTDGQTEITAVEYSHIPSIPDDI
        R+L+F LTDG+TEI+A+EYSHIP+I +D+
Subjt:  RLLRFGLTDGQTEITAVEYSHIPSIPDDI

AT5G19950.2 Domain of unknown function (DUF1767)2.3e-2947.29Show/hide
Query:  VLETLRVRGWNFGDLDEVRATIMIANAL---ADDPSSVVDSVESELINMDLRSIGGKSLPEPALLRKSSRILGPMVLQISSVKDISRSSLDGMLKASNGR
        V+  L  RGW F D++ +++ +   ++L    +   ++V+SVE+EL+NMD++ IGGKSLP+P  LR+ S + GP VLQIS V+D++RSS +  + +S G+
Subjt:  VLETLRVRGWNFGDLDEVRATIMIANAL---ADDPSSVVDSVESELINMDLRSIGGKSLPEPALLRKSSRILGPMVLQISSVKDISRSSLDGMLKASNGR

Query:  RLLRFGLTDGQTEITAVEYSHIPSIPDDI
        R+L+F LTDG+TEI+A+EYSHIP+I +D+
Subjt:  RLLRFGLTDGQTEITAVEYSHIPSIPDDI

AT5G19950.3 Domain of unknown function (DUF1767)2.3e-2947.29Show/hide
Query:  VLETLRVRGWNFGDLDEVRATIMIANAL---ADDPSSVVDSVESELINMDLRSIGGKSLPEPALLRKSSRILGPMVLQISSVKDISRSSLDGMLKASNGR
        V+  L  RGW F D++ +++ +   ++L    +   ++V+SVE+EL+NMD++ IGGKSLP+P  LR+ S + GP VLQIS V+D++RSS +  + +S G+
Subjt:  VLETLRVRGWNFGDLDEVRATIMIANAL---ADDPSSVVDSVESELINMDLRSIGGKSLPEPALLRKSSRILGPMVLQISSVKDISRSSLDGMLKASNGR

Query:  RLLRFGLTDGQTEITAVEYSHIPSIPDDI
        R+L+F LTDG+TEI+A+EYSHIP+I +D+
Subjt:  RLLRFGLTDGQTEITAVEYSHIPSIPDDI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGATGCTTCCGTCGCCGTGCTTGAAACATTACGGGTGAGAGGATGGAATTTCGGCGATTTGGACGAAGTTAGGGCCACAATCATGATCGCTAACGCCTTGGCCGA
TGATCCGAGTTCGGTCGTTGATTCGGTGGAATCGGAGCTCATAAACATGGACCTCAGGTCCATTGGAGGCAAGTCCTTGCCTGAACCTGCTCTTCTTCGCAAGTCTTCTC
GCATTCTCGGCCCTATGGTTCTCCAGATATCATCTGTAAAAGACATATCGCGAAGCAGCCTAGACGGTATGTTGAAAGCTTCTAATGGTCGGCGTCTCCTACGCTTCGGT
CTCACTGATGGACAAACTGAGATTACTGCTGTAGAGTACTCTCATATACCATCTATTCCTGATGATATTCCCCTGGCACCAAGAACATCCTCATTGTCTGCTTATCCTAT
GTTGTTCAACCTTCTTCAGAGCAAAGGTTCTTCCATCCATTTCTTATGGAATGTGGCCACTGGGTGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGATGCTTCCGTCGCCGTGCTTGAAACATTACGGGTGAGAGGATGGAATTTCGGCGATTTGGACGAAGTTAGGGCCACAATCATGATCGCTAACGCCTTGGCCGA
TGATCCGAGTTCGGTCGTTGATTCGGTGGAATCGGAGCTCATAAACATGGACCTCAGGTCCATTGGAGGCAAGTCCTTGCCTGAACCTGCTCTTCTTCGCAAGTCTTCTC
GCATTCTCGGCCCTATGGTTCTCCAGATATCATCTGTAAAAGACATATCGCGAAGCAGCCTAGACGGTATGTTGAAAGCTTCTAATGGTCGGCGTCTCCTACGCTTCGGT
CTCACTGATGGACAAACTGAGATTACTGCTGTAGAGTACTCTCATATACCATCTATTCCTGATGATATTCCCCTGGCACCAAGAACATCCTCATTGTCTGCTTATCCTAT
GTTGTTCAACCTTCTTCAGAGCAAAGGTTCTTCCATCCATTTCTTATGGAATGTGGCCACTGGGTGCTGA
Protein sequenceShow/hide protein sequence
MEDASVAVLETLRVRGWNFGDLDEVRATIMIANALADDPSSVVDSVESELINMDLRSIGGKSLPEPALLRKSSRILGPMVLQISSVKDISRSSLDGMLKASNGRRLLRFG
LTDGQTEITAVEYSHIPSIPDDIPLAPRTSSLSAYPMLFNLLQSKGSSIHFLWNVATGC