; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0034427 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0034427
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionATP-dependent RNA helicase DDX11-like protein
Genome locationchr3:7295494..7302592
RNA-Seq ExpressionLag0034427
SyntenyLag0034427
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587958.1 hypothetical protein SDJN03_16523, partial [Cucurbita argyrosperma subsp. sororia]2.3e-5472.78Show/hide
Query:  NSPYHRLPKA-APPFAAGPDMDKDSTFHFISSQKEVKNGSFMKNSNAMANSVHFSKTIDETQMERVEKNQQSIRIRATHQRKTQENCESSSK-SSSLNQY
        ++ YHRLPKA  PPF AGP+M KD          +V+NGSF K++    N+VHFSKTID+TQM+RVEKN+QSI+I ATHQRKTQEN ES SK SS L +Y
Subjt:  NSPYHRLPKA-APPFAAGPDMDKDSTFHFISSQKEVKNGSFMKNSNAMANSVHFSKTIDETQMERVEKNQQSIRIRATHQRKTQENCESSSK-SSSLNQY

Query:  DERRMCLVAKKIKELEKLDARNVDHTLDIEEVLHYYSRLTCPTYLEIVDRFFMEIFAEFCSNNSSSQQN
        DERR+CLVAKKIKELEKLDARNVDH+LDIEE+LHYYSRLTCPTYLEIVD FFM++FAEFCSN+SSSQQN
Subjt:  DERRMCLVAKKIKELEKLDARNVDHTLDIEEVLHYYSRLTCPTYLEIVDRFFMEIFAEFCSNNSSSQQN

XP_022145016.1 uncharacterized protein LOC111014544 [Momordica charantia]4.0e-5164.92Show/hide
Query:  NSPYHRLPKAAPPFAAGPDMDKDSTFHFISSQKEVKNGSFMKNSNAMANSVHFSKTIDETQME--RVEKNQQSI-RIRATHQRKTQENCESSSKSSSLNQ
        ++ YHRLPK  PPFAAGP M+KDSTF FISSQKEV++G FMKN+   +N++HF   ++ETQME   V+K+  S+  I ATHQRK QEN +  S S  +  
Subjt:  NSPYHRLPKAAPPFAAGPDMDKDSTFHFISSQKEVKNGSFMKNSNAMANSVHFSKTIDETQME--RVEKNQQSI-RIRATHQRKTQENCESSSKSSSLNQ

Query:  YDERRMCLVAKKIKELEKLDARNVDHTLDIEEVLHYYSRLTCPTYLEIVDRFFMEIFAEFCSNNSSSQQNCTVKSRRIGSESVGLERRSKS
         DERRMCLVAKKIKELEKLD+RNVDH LDIEE+LHYYSRLTCP YLEIVD+FF EIFAEF S NSSSQ   T+K R I  +SVGL +R  S
Subjt:  YDERRMCLVAKKIKELEKLDARNVDHTLDIEEVLHYYSRLTCPTYLEIVDRFFMEIFAEFCSNNSSSQQNCTVKSRRIGSESVGLERRSKS

XP_022933508.1 uncharacterized protein LOC111440909 [Cucurbita moschata]6.7e-5472.78Show/hide
Query:  NSPYHRLPKA-APPFAAGPDMDKDSTFHFISSQKEVKNGSFMKNSNAMANSVHFSKTIDETQMERVEKNQQSIRIRATHQRKTQENCESSSK-SSSLNQY
        ++ YHRLPKA  PPF AGP+M KD          EV+NGSF K++    N+VHFSKTID+TQM+RVEKN+QSI+I ATHQRKTQEN ES SK SS L +Y
Subjt:  NSPYHRLPKA-APPFAAGPDMDKDSTFHFISSQKEVKNGSFMKNSNAMANSVHFSKTIDETQMERVEKNQQSIRIRATHQRKTQENCESSSK-SSSLNQY

Query:  DERRMCLVAKKIKELEKLDARNVDHTLDIEEVLHYYSRLTCPTYLEIVDRFFMEIFAEFCSNNSSSQQN
        DERR+CLVAKKIKELEKLDARNV H+LDIEE+LHYYSRLTCPTYLEIVD FFM++FAEFCSN+SSSQQN
Subjt:  DERRMCLVAKKIKELEKLDARNVDHTLDIEEVLHYYSRLTCPTYLEIVDRFFMEIFAEFCSNNSSSQQN

XP_022973644.1 uncharacterized protein LOC111472233 [Cucurbita maxima]9.3e-5662.75Show/hide
Query:  LCRPGPSRHRSAGGLHHIGVQRFLLVLQVTSSPASTNSPYHRLPKAAPPFAAGPDMDKDSTFHFISSQKEVKNGSFMKNSNAMANSVHFSKTIDETQMER
        L R  P ++ S   L  I   +      + +  +  ++ YHRLPKAAPPF AGP+M KD          EV+NGSF K++    N+VHFSKTID+TQM+R
Subjt:  LCRPGPSRHRSAGGLHHIGVQRFLLVLQVTSSPASTNSPYHRLPKAAPPFAAGPDMDKDSTFHFISSQKEVKNGSFMKNSNAMANSVHFSKTIDETQMER

Query:  VEKNQQSIRIRATHQRKTQENCESSSK-SSSLNQYDERRMCLVAKKIKELEKLDARNVDHTLDIEEVLHYYSRLTCPTYLEIVDRFFMEIFAEFCSNNSS
        VEKN+QSI+I ATHQRK+QEN ES SK S  L +YDERR+CLVAKKIKELEKLDARNVDH+LDIEE+LHYYSRLTCPTYLEIVD FFM++FAEFCSN+SS
Subjt:  VEKNQQSIRIRATHQRKTQENCESSSK-SSSLNQYDERRMCLVAKKIKELEKLDARNVDHTLDIEEVLHYYSRLTCPTYLEIVDRFFMEIFAEFCSNNSS

Query:  SQQN
        SQ N
Subjt:  SQQN

XP_023515883.1 uncharacterized protein LOC111779922 [Cucurbita pepo subsp. pepo]1.8e-5164.62Show/hide
Query:  NSPYHRLPKAAPPFAAGPDMDKDSTFHFISSQKEVKNGSFMKNSNAMANSVHFSKTIDETQMERVEKNQQSIRIRATHQRKTQENCESSSKSSSLNQYDE
        ++ Y RLPKAAPPF+ G +MDKDS              SFMKNSN   N+VHFSKTIDETQM++VEKN+ SI+I  THQRKTQEN         L +YDE
Subjt:  NSPYHRLPKAAPPFAAGPDMDKDSTFHFISSQKEVKNGSFMKNSNAMANSVHFSKTIDETQMERVEKNQQSIRIRATHQRKTQENCESSSKSSSLNQYDE

Query:  RRMCLVAKKIKELEKLDARNVDHTLDIEEVLHYYSRLTCPTYLEIVDRFFMEIFAEFCSNNSSSQQNCTVKSRRIGSE-SVGLERRSKSRLGNLE
        RRMC VAKK+KELEKLDAR+VDH LDIEE+LHYYSRL+CPTYLEIVD+FFM+IFAEFC+N SS Q N       IG E S GL RR KSRLGN+E
Subjt:  RRMCLVAKKIKELEKLDARNVDHTLDIEEVLHYYSRLTCPTYLEIVDRFFMEIFAEFCSNNSSSQQNCTVKSRRIGSE-SVGLERRSKSRLGNLE

TrEMBL top hitse value%identityAlignment
A0A6J1CV44 uncharacterized protein LOC1110145442.0e-5164.92Show/hide
Query:  NSPYHRLPKAAPPFAAGPDMDKDSTFHFISSQKEVKNGSFMKNSNAMANSVHFSKTIDETQME--RVEKNQQSI-RIRATHQRKTQENCESSSKSSSLNQ
        ++ YHRLPK  PPFAAGP M+KDSTF FISSQKEV++G FMKN+   +N++HF   ++ETQME   V+K+  S+  I ATHQRK QEN +  S S  +  
Subjt:  NSPYHRLPKAAPPFAAGPDMDKDSTFHFISSQKEVKNGSFMKNSNAMANSVHFSKTIDETQME--RVEKNQQSI-RIRATHQRKTQENCESSSKSSSLNQ

Query:  YDERRMCLVAKKIKELEKLDARNVDHTLDIEEVLHYYSRLTCPTYLEIVDRFFMEIFAEFCSNNSSSQQNCTVKSRRIGSESVGLERRSKS
         DERRMCLVAKKIKELEKLD+RNVDH LDIEE+LHYYSRLTCP YLEIVD+FF EIFAEF S NSSSQ   T+K R I  +SVGL +R  S
Subjt:  YDERRMCLVAKKIKELEKLDARNVDHTLDIEEVLHYYSRLTCPTYLEIVDRFFMEIFAEFCSNNSSSQQNCTVKSRRIGSESVGLERRSKS

A0A6J1F4Y2 uncharacterized protein LOC1114409093.2e-5472.78Show/hide
Query:  NSPYHRLPKA-APPFAAGPDMDKDSTFHFISSQKEVKNGSFMKNSNAMANSVHFSKTIDETQMERVEKNQQSIRIRATHQRKTQENCESSSK-SSSLNQY
        ++ YHRLPKA  PPF AGP+M KD          EV+NGSF K++    N+VHFSKTID+TQM+RVEKN+QSI+I ATHQRKTQEN ES SK SS L +Y
Subjt:  NSPYHRLPKA-APPFAAGPDMDKDSTFHFISSQKEVKNGSFMKNSNAMANSVHFSKTIDETQMERVEKNQQSIRIRATHQRKTQENCESSSK-SSSLNQY

Query:  DERRMCLVAKKIKELEKLDARNVDHTLDIEEVLHYYSRLTCPTYLEIVDRFFMEIFAEFCSNNSSSQQN
        DERR+CLVAKKIKELEKLDARNV H+LDIEE+LHYYSRLTCPTYLEIVD FFM++FAEFCSN+SSSQQN
Subjt:  DERRMCLVAKKIKELEKLDARNVDHTLDIEEVLHYYSRLTCPTYLEIVDRFFMEIFAEFCSNNSSSQQN

A0A6J1H9I9 uncharacterized protein LOC1114613294.4e-5163.59Show/hide
Query:  NSPYHRLPKAAPPFAAGPDMDKDSTFHFISSQKEVKNGSFMKNSNAMANSVHFSKTIDETQMERVEKNQQSIRIRATHQRKTQENCESSSKSSSLNQYDE
        ++ Y RLPKA PPF+ G +MDKDS              SFMKNSN   N+V FSKT+DETQM++VEKN+ SI+I  THQRKTQEN         L +YDE
Subjt:  NSPYHRLPKAAPPFAAGPDMDKDSTFHFISSQKEVKNGSFMKNSNAMANSVHFSKTIDETQMERVEKNQQSIRIRATHQRKTQENCESSSKSSSLNQYDE

Query:  RRMCLVAKKIKELEKLDARNVDHTLDIEEVLHYYSRLTCPTYLEIVDRFFMEIFAEFCSNNSSSQQNCTVKSRRIGSE-SVGLERRSKSRLGNLE
        RRMCLVAKK+KELEKLDAR+VDH LDIEE+LHYYSRL+CPTYLEIVD+FFM+IFAEFC+N+SS Q N       IG E SVGL RR KSRLG +E
Subjt:  RRMCLVAKKIKELEKLDARNVDHTLDIEEVLHYYSRLTCPTYLEIVDRFFMEIFAEFCSNNSSSQQNCTVKSRRIGSE-SVGLERRSKSRLGNLE

A0A6J1IF62 uncharacterized protein LOC1114722334.5e-5662.75Show/hide
Query:  LCRPGPSRHRSAGGLHHIGVQRFLLVLQVTSSPASTNSPYHRLPKAAPPFAAGPDMDKDSTFHFISSQKEVKNGSFMKNSNAMANSVHFSKTIDETQMER
        L R  P ++ S   L  I   +      + +  +  ++ YHRLPKAAPPF AGP+M KD          EV+NGSF K++    N+VHFSKTID+TQM+R
Subjt:  LCRPGPSRHRSAGGLHHIGVQRFLLVLQVTSSPASTNSPYHRLPKAAPPFAAGPDMDKDSTFHFISSQKEVKNGSFMKNSNAMANSVHFSKTIDETQMER

Query:  VEKNQQSIRIRATHQRKTQENCESSSK-SSSLNQYDERRMCLVAKKIKELEKLDARNVDHTLDIEEVLHYYSRLTCPTYLEIVDRFFMEIFAEFCSNNSS
        VEKN+QSI+I ATHQRK+QEN ES SK S  L +YDERR+CLVAKKIKELEKLDARNVDH+LDIEE+LHYYSRLTCPTYLEIVD FFM++FAEFCSN+SS
Subjt:  VEKNQQSIRIRATHQRKTQENCESSSK-SSSLNQYDERRMCLVAKKIKELEKLDARNVDHTLDIEEVLHYYSRLTCPTYLEIVDRFFMEIFAEFCSNNSS

Query:  SQQN
        SQ N
Subjt:  SQQN

A0A6J1JFL9 uncharacterized protein LOC1114852921.6e-4561.54Show/hide
Query:  NSPYHRLPKAAPPFAAGPDMDKDSTFHFISSQKEVKNGSFMKNSNAMANSVHFSKTIDETQMERVEKNQQSIRIRATHQRKTQENCESSSKSSSLNQYDE
        ++ Y RLPK          MDKDS              SFMKNSN   N+VHFSKTI ETQM++VEKN+ SI+I ATHQRKTQEN         L  YDE
Subjt:  NSPYHRLPKAAPPFAAGPDMDKDSTFHFISSQKEVKNGSFMKNSNAMANSVHFSKTIDETQMERVEKNQQSIRIRATHQRKTQENCESSSKSSSLNQYDE

Query:  RRMCLVAKKIKELEKLDARNVDHTLDIEEVLHYYSRLTCPTYLEIVDRFFMEIFAEFCSNNSSSQQNCTVKSRRIGSE-SVGLERRSKSRLGNLE
        RRMCLVAKK+KELEKLDAR+VDH LDIEE+LHYYSRL+CPTYL+IVD+FFM+IFAEFC+N SS Q N       IG + SVGL RR KSRLGN+E
Subjt:  RRMCLVAKKIKELEKLDARNVDHTLDIEEVLHYYSRLTCPTYLEIVDRFFMEIFAEFCSNNSSSQQNCTVKSRRIGSE-SVGLERRSKSRLGNLE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G15260.1 unknown protein2.6e-0835.87Show/hide
Query:  THQRKTQENCESSSKSSSLNQYD-ERRMCLVAKKIKELEKLDARNVDHTLDIEEVLHYYSRLTCPTYLEIVDRFFMEIFAEFCSNNSSSQQN
        THQ+      +   K  +    D ++R   +A+K+K+L  +D R+VDH LD+ E L  YS +  P YL+IVD FF +++ EF    +S++ N
Subjt:  THQRKTQENCESSSKSSSLNQYD-ERRMCLVAKKIKELEKLDARNVDHTLDIEEVLHYYSRLTCPTYLEIVDRFFMEIFAEFCSNNSSSQQN

AT3G16070.1 unknown protein1.8e-0934.15Show/hide
Query:  IRATHQRKTQENCESSSKSSSLNQYDERRMCLVAKKIKELEKLDARNVDHTLDIEEVLHYYSRLTCPTYLEIVDRFFMEIFA
        ++  H+ + QE      K+ + + Y  R    + KKI E+   +  +++  LD+EE LHYYSR++ P YL IVD+FF ++++
Subjt:  IRATHQRKTQENCESSSKSSSLNQYDERRMCLVAKKIKELEKLDARNVDHTLDIEEVLHYYSRLTCPTYLEIVDRFFMEIFA

AT3G24535.1 unknown protein2.1e-0536.36Show/hide
Query:  YDERRMCLVAKKIKELEKLDARNV----DHTLDIEEVLHYYSRLTCPTYLEIVDRFFMEIFAEFCS
        + + ++ LV  K+KE+EK+   ++     +  D+ E LH YSRL    YL++V+ FFME++++F S
Subjt:  YDERRMCLVAKKIKELEKLDARNV----DHTLDIEEVLHYYSRLTCPTYLEIVDRFFMEIFAEFCS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGCAAATGCATTTTTTGGGTTGAAGAGCTGTGGTTCTGGCTCTGCACCTAAAACTGATGGAGTCCACGTCTGTAGATCTCTGATCAACTTGCTTGTTATGTGTTC
AAATCTTGAGTCACGAACTAGTTACCTCTTGGTCTTCAATCACAAGTCCAAGGAGACAACCAGGAAGCGGGCCCTGAAGGAGGAACGGGCTAGAGGGTCGGGCCAAGGCC
AGAAAGATCAGACCTTGGTTCGAGCATTATGGTCGCCCTTGGCCCAAGGCCGAGGCTCTTACCATTTGTCCATTTGCACGGGCCGAGCCCTTATGCCCCCATTCGGTCTT
TGTCGCCCCGGTCCATCCCGGCATCGGAGTGCAGGTGGCCTACACCACATCGGTGTGCAGCGGTTCTTGCTGGTCTTGCAGGTCACGTCTTCTCCAGCTTCTACAAATTC
ACCCTACCACCGCCTGCCCAAGGCGGCGCCGCCCTTCGCCGCCGGCCCCGACATGGACAAAGACTCAACCTTTCACTTCATTTCATCCCAAAAAGAGGTCAAAAATGGAA
GCTTTATGAAGAACAGCAATGCTATGGCTAATTCAGTCCATTTCTCGAAGACAATCGACGAGACCCAGATGGAAAGAGTCGAGAAAAATCAACAGAGCATCAGAATTCGA
GCGACCCATCAAAGGAAAACGCAAGAAAATTGCGAATCGAGCTCGAAGAGTTCTAGTTTGAATCAGTACGACGAGAGGAGAATGTGTTTGGTTGCCAAGAAAATTAAAGA
GTTGGAAAAACTAGACGCGAGAAATGTGGATCATACTTTGGATATTGAAGAGGTTCTTCATTACTACTCTCGTCTCACTTGTCCAACATATCTTGAAATCGTGGACAGAT
TCTTCATGGAGATTTTTGCTGAATTTTGTTCTAACAATTCTTCTTCTCAACAAAATTGCACTGTGAAATCCAGGCGAATTGGGTCGGAATCGGTGGGCTTAGAGAGAAGA
TCAAAATCTCGTTTGGGAAATTTGGAGCCCTTCGTCCTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGCAAATGCATTTTTTGGGTTGAAGAGCTGTGGTTCTGGCTCTGCACCTAAAACTGATGGAGTCCACGTCTGTAGATCTCTGATCAACTTGCTTGTTATGTGTTC
AAATCTTGAGTCACGAACTAGTTACCTCTTGGTCTTCAATCACAAGTCCAAGGAGACAACCAGGAAGCGGGCCCTGAAGGAGGAACGGGCTAGAGGGTCGGGCCAAGGCC
AGAAAGATCAGACCTTGGTTCGAGCATTATGGTCGCCCTTGGCCCAAGGCCGAGGCTCTTACCATTTGTCCATTTGCACGGGCCGAGCCCTTATGCCCCCATTCGGTCTT
TGTCGCCCCGGTCCATCCCGGCATCGGAGTGCAGGTGGCCTACACCACATCGGTGTGCAGCGGTTCTTGCTGGTCTTGCAGGTCACGTCTTCTCCAGCTTCTACAAATTC
ACCCTACCACCGCCTGCCCAAGGCGGCGCCGCCCTTCGCCGCCGGCCCCGACATGGACAAAGACTCAACCTTTCACTTCATTTCATCCCAAAAAGAGGTCAAAAATGGAA
GCTTTATGAAGAACAGCAATGCTATGGCTAATTCAGTCCATTTCTCGAAGACAATCGACGAGACCCAGATGGAAAGAGTCGAGAAAAATCAACAGAGCATCAGAATTCGA
GCGACCCATCAAAGGAAAACGCAAGAAAATTGCGAATCGAGCTCGAAGAGTTCTAGTTTGAATCAGTACGACGAGAGGAGAATGTGTTTGGTTGCCAAGAAAATTAAAGA
GTTGGAAAAACTAGACGCGAGAAATGTGGATCATACTTTGGATATTGAAGAGGTTCTTCATTACTACTCTCGTCTCACTTGTCCAACATATCTTGAAATCGTGGACAGAT
TCTTCATGGAGATTTTTGCTGAATTTTGTTCTAACAATTCTTCTTCTCAACAAAATTGCACTGTGAAATCCAGGCGAATTGGGTCGGAATCGGTGGGCTTAGAGAGAAGA
TCAAAATCTCGTTTGGGAAATTTGGAGCCCTTCGTCCTCTGA
Protein sequenceShow/hide protein sequence
MKANAFFGLKSCGSGSAPKTDGVHVCRSLINLLVMCSNLESRTSYLLVFNHKSKETTRKRALKEERARGSGQGQKDQTLVRALWSPLAQGRGSYHLSICTGRALMPPFGL
CRPGPSRHRSAGGLHHIGVQRFLLVLQVTSSPASTNSPYHRLPKAAPPFAAGPDMDKDSTFHFISSQKEVKNGSFMKNSNAMANSVHFSKTIDETQMERVEKNQQSIRIR
ATHQRKTQENCESSSKSSSLNQYDERRMCLVAKKIKELEKLDARNVDHTLDIEEVLHYYSRLTCPTYLEIVDRFFMEIFAEFCSNNSSSQQNCTVKSRRIGSESVGLERR
SKSRLGNLEPFVL