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Lag0034486 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0034486
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionrRNA methyltransferase 1, mitochondrial
Genome locationchr3:7781258..7781587
RNA-Seq ExpressionLag0034486
SyntenyLag0034486
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004135672.1 uncharacterized protein LOC101220884 [Cucumis sativus]2.4e-0542.86Show/hide
Query:  SKDIWKRGNRPSGNKPEKRYGKAPVRSANHSTWEISAESLLVKALSLQIKEEKVGGQEWTMSRQRNDDIK
        SK   K GNR S ++PEKRYGK P+ SAN STWE+SAE    +++ L  ++ +          Q++DDI+
Subjt:  SKDIWKRGNRPSGNKPEKRYGKAPVRSANHSTWEISAESLLVKALSLQIKEEKVGGQEWTMSRQRNDDIK

XP_008450781.1 PREDICTED: uncharacterized tRNA/rRNA methyltransferase MSMEG_6073/MSMEI_5913 [Cucumis melo]2.6e-0444.29Show/hide
Query:  SKDIWKRGNRPSGNKPEKRYGKAPVRSANHSTWEISAESLLVKALSLQIKEEKVGGQEWTMSRQRNDDIK
        SK   K GNR S ++PEKRYGK P+ SAN STWE+SAE    + +     E +          Q NDDI+
Subjt:  SKDIWKRGNRPSGNKPEKRYGKAPVRSANHSTWEISAESLLVKALSLQIKEEKVGGQEWTMSRQRNDDIK

XP_022937862.1 rRNA methyltransferase 1, mitochondrial [Cucurbita moschata]1.5e-0439.74Show/hide
Query:  EEILKGLFSKDIWKRGNRPSGNKPEKRYGKAPVRSANHSTWEISAESLLVKALSLQIKEEKVGGQEWTMSRQRNDDIK
        +E   G   K   KRGNR SG++PEKRYGKAPV S   S+WE+SAE    + +    +  +          QRN D++
Subjt:  EEILKGLFSKDIWKRGNRPSGNKPEKRYGKAPVRSANHSTWEISAESLLVKALSLQIKEEKVGGQEWTMSRQRNDDIK

XP_022965658.1 uncharacterized protein LOC111465489 [Cucurbita maxima]3.1e-0544.93Show/hide
Query:  KDIWKRGNRPSGNKPEKRYGKAPVRSANHSTWEISAESLLVKALSLQIKEEKVGGQEWTMSRQRNDDIK
        K   KRGNRPSG++PEKRYGKAPV SA  S+WE+SAE    + +    +  +          QRN D++
Subjt:  KDIWKRGNRPSGNKPEKRYGKAPVRSANHSTWEISAESLLVKALSLQIKEEKVGGQEWTMSRQRNDDIK

XP_023536668.1 rRNA methyltransferase 1, mitochondrial [Cucurbita pepo subsp. pepo]6.9e-0544.93Show/hide
Query:  KDIWKRGNRPSGNKPEKRYGKAPVRSANHSTWEISAESLLVKALSLQIKEEKVGGQEWTMSRQRNDDIK
        K I KRGNRPSG++ EKRYGKAPV SA  S+WE+SAE L  + +    +  +          QR+ D++
Subjt:  KDIWKRGNRPSGNKPEKRYGKAPVRSANHSTWEISAESLLVKALSLQIKEEKVGGQEWTMSRQRNDDIK

TrEMBL top hitse value%identityAlignment
A0A0A0LW97 SpoU_sub_bind domain-containing protein1.2e-0542.86Show/hide
Query:  SKDIWKRGNRPSGNKPEKRYGKAPVRSANHSTWEISAESLLVKALSLQIKEEKVGGQEWTMSRQRNDDIK
        SK   K GNR S ++PEKRYGK P+ SAN STWE+SAE    +++ L  ++ +          Q++DDI+
Subjt:  SKDIWKRGNRPSGNKPEKRYGKAPVRSANHSTWEISAESLLVKALSLQIKEEKVGGQEWTMSRQRNDDIK

A0A1S3BQ13 uncharacterized tRNA/rRNA methyltransferase MSMEG_6073/MSMEI_59131.3e-0444.29Show/hide
Query:  SKDIWKRGNRPSGNKPEKRYGKAPVRSANHSTWEISAESLLVKALSLQIKEEKVGGQEWTMSRQRNDDIK
        SK   K GNR S ++PEKRYGK P+ SAN STWE+SAE    + +     E +          Q NDDI+
Subjt:  SKDIWKRGNRPSGNKPEKRYGKAPVRSANHSTWEISAESLLVKALSLQIKEEKVGGQEWTMSRQRNDDIK

A0A5D3CIS9 Putative tRNA/rRNA methyltransferase1.3e-0444.29Show/hide
Query:  SKDIWKRGNRPSGNKPEKRYGKAPVRSANHSTWEISAESLLVKALSLQIKEEKVGGQEWTMSRQRNDDIK
        SK   K GNR S ++PEKRYGK P+ SAN STWE+SAE    + +     E +          Q NDDI+
Subjt:  SKDIWKRGNRPSGNKPEKRYGKAPVRSANHSTWEISAESLLVKALSLQIKEEKVGGQEWTMSRQRNDDIK

A0A6J1FCE1 rRNA methyltransferase 1, mitochondrial7.5e-0539.74Show/hide
Query:  EEILKGLFSKDIWKRGNRPSGNKPEKRYGKAPVRSANHSTWEISAESLLVKALSLQIKEEKVGGQEWTMSRQRNDDIK
        +E   G   K   KRGNR SG++PEKRYGKAPV S   S+WE+SAE    + +    +  +          QRN D++
Subjt:  EEILKGLFSKDIWKRGNRPSGNKPEKRYGKAPVRSANHSTWEISAESLLVKALSLQIKEEKVGGQEWTMSRQRNDDIK

A0A6J1HPM2 uncharacterized protein LOC1114654891.5e-0544.93Show/hide
Query:  KDIWKRGNRPSGNKPEKRYGKAPVRSANHSTWEISAESLLVKALSLQIKEEKVGGQEWTMSRQRNDDIK
        K   KRGNRPSG++PEKRYGKAPV SA  S+WE+SAE    + +    +  +          QRN D++
Subjt:  KDIWKRGNRPSGNKPEKRYGKAPVRSANHSTWEISAESLLVKALSLQIKEEKVGGQEWTMSRQRNDDIK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGGAGAATCAACGATAAAGAAGGGAGAGACAATCGTCTTGGATGGAATCGGATTTAATGTCAGAAAAGAAGAGATCCTCAAGGGACTATTCAGCAAAGACATTTG
GAAAAGGGGTAATAGGCCATCTGGAAATAAACCAGAAAAGAGATATGGCAAAGCACCTGTTAGAAGTGCTAATCATTCTACTTGGGAGATCTCTGCAGAGAGTTTGCTAG
TCAAGGCATTGAGTCTGCAGATTAAAGAAGAGAAAGTAGGCGGACAAGAGTGGACAATGAGCAGGCAGCGAAACGACGATATCAAAGGGGGCAAAGTTATGAAGAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTGGAGAATCAACGATAAAGAAGGGAGAGACAATCGTCTTGGATGGAATCGGATTTAATGTCAGAAAAGAAGAGATCCTCAAGGGACTATTCAGCAAAGACATTTG
GAAAAGGGGTAATAGGCCATCTGGAAATAAACCAGAAAAGAGATATGGCAAAGCACCTGTTAGAAGTGCTAATCATTCTACTTGGGAGATCTCTGCAGAGAGTTTGCTAG
TCAAGGCATTGAGTCTGCAGATTAAAGAAGAGAAAGTAGGCGGACAAGAGTGGACAATGAGCAGGCAGCGAAACGACGATATCAAAGGGGGCAAAGTTATGAAGAAGTAG
Protein sequenceShow/hide protein sequence
MVGESTIKKGETIVLDGIGFNVRKEEILKGLFSKDIWKRGNRPSGNKPEKRYGKAPVRSANHSTWEISAESLLVKALSLQIKEEKVGGQEWTMSRQRNDDIKGGKVMKK