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Lag0034498 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0034498
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr3:7888041..7888775
RNA-Seq ExpressionLag0034498
SyntenyLag0034498
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PRQ37402.1 putative ribonuclease H-like domain, reverse transcriptase zinc-binding domain-containing protein [Rosa chinensis]1.6e-0436.36Show/hide
Query:  LEAKAVWEGLK--SLINLPGKPMEIEVESDCLELINSLTKVEEDLSELKDFVEAILGLSQTLGVLRFKHCPRRQNGVAHSLAREGLGLIAVLVFLFRDRG
        +EA A+ EGL+   L+ +      +EVE D L +INSL++ E DL+E+   +E +  L Q    + +KH  ++ N VAH LAR  L   +V     R+RG
Subjt:  LEAKAVWEGLK--SLINLPGKPMEIEVESDCLELINSLTKVEEDLSELKDFVEAILGLSQTLGVLRFKHCPRRQNGVAHSLAREGLGLIAVLVFLFRDRG

Query:  SFPCWKEKVV
          P W  ++V
Subjt:  SFPCWKEKVV
XP_022155262.1 uncharacterized protein LOC111022403 [Momordica charantia]3.3e-0535.85Show/hide
Query:  MKVLEAKAVWEGLKSLINLPGKPMEIEVESDCLELINSLTKVEEDLSELKDFVEAILGLSQTLGVLRFKHCPRRQNGVAHSLAREGLGLIAVLVFLFRDR
        +K+LEA A+ EGL++L NL G    + +E+D  E+ + L +  EDL++    VE IL L  +  +L F    R  NG AHSLA+    L   ++++    
Subjt:  MKVLEAKAVWEGLKSLINLPGKPMEIEVESDCLELINSLTKVEEDLSELKDFVEAILGLSQTLGVLRFKHCPRRQNGVAHSLAREGLGLIAVLVFLFRDR

Query:  GSFPCW
          FP W
Subjt:  GSFPCW
TrEMBL top hitse value%identityAlignment
A0A2P6QT88 Putative ribonuclease H-like domain, reverse transcriptase zinc-binding domain-containing protein7.9e-0536.36Show/hide
Query:  LEAKAVWEGLK--SLINLPGKPMEIEVESDCLELINSLTKVEEDLSELKDFVEAILGLSQTLGVLRFKHCPRRQNGVAHSLAREGLGLIAVLVFLFRDRG
        +EA A+ EGL+   L+ +      +EVE D L +INSL++ E DL+E+   +E +  L Q    + +KH  ++ N VAH LAR  L   +V     R+RG
Subjt:  LEAKAVWEGLK--SLINLPGKPMEIEVESDCLELINSLTKVEEDLSELKDFVEAILGLSQTLGVLRFKHCPRRQNGVAHSLAREGLGLIAVLVFLFRDRG

Query:  SFPCWKEKVV
          P W  ++V
Subjt:  SFPCWKEKVV
A0A6J1D4B6 uncharacterized protein LOC1110171815.1e-0444.26Show/hide
Query:  MEIEVESDCLELINSLTKVEEDLSELKDFVEAILGLSQTLGVLRFKHCPRRQNGVAHSLAR
        ++IE+ESDCLE++N + K    L+E+   VE I    ++L +  FKH P + NGVAH +AR
Subjt:  MEIEVESDCLELINSLTKVEEDLSELKDFVEAILGLSQTLGVLRFKHCPRRQNGVAHSLAR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGTGTTGGAAGCGAAAGCGGTGTGGGAAGGATTAAAAAGCTTAATTAATTTACCTGGGAAGCCGATGGAGATCGAAGTTGAATCGGATTGCCTCGAGCTTATCAA
TAGCTTGACCAAAGTAGAAGAAGACCTGTCGGAATTGAAGGATTTCGTGGAAGCAATTCTCGGATTGTCTCAGACGCTAGGGGTGCTACGTTTTAAGCACTGCCCTAGAC
GTCAAAACGGTGTTGCGCATTCCCTAGCTCGTGAGGGGCTGGGCTTGATTGCCGTTCTGGTTTTTTTGTTCAGGGACAGAGGCTCCTTTCCATGCTGGAAGGAGAAGGTT
GTTTTTGGTCCTCTGATTTCCCGCGTTTTATCTCCTCCATTGTTTTCGAGGACTGTTGTTCTGGTTTCGGTTGTTTTGCATTTCGAGGTTCTTGCTTGCGGCTTCTTGAA
GACGATGTGCCCTTCCACTGCGATGCTGAGAGTTAAAGCTGTTGACCTCGTCAACGGATTGCCATGGTCACGACGGTGCGATCACCGATATTTATTATCAGGGATGATCT
TCGCCAGAAAATCAGTGCAATCGCGTGAGAGTTACGCGAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGTGTTGGAAGCGAAAGCGGTGTGGGAAGGATTAAAAAGCTTAATTAATTTACCTGGGAAGCCGATGGAGATCGAAGTTGAATCGGATTGCCTCGAGCTTATCAA
TAGCTTGACCAAAGTAGAAGAAGACCTGTCGGAATTGAAGGATTTCGTGGAAGCAATTCTCGGATTGTCTCAGACGCTAGGGGTGCTACGTTTTAAGCACTGCCCTAGAC
GTCAAAACGGTGTTGCGCATTCCCTAGCTCGTGAGGGGCTGGGCTTGATTGCCGTTCTGGTTTTTTTGTTCAGGGACAGAGGCTCCTTTCCATGCTGGAAGGAGAAGGTT
GTTTTTGGTCCTCTGATTTCCCGCGTTTTATCTCCTCCATTGTTTTCGAGGACTGTTGTTCTGGTTTCGGTTGTTTTGCATTTCGAGGTTCTTGCTTGCGGCTTCTTGAA
GACGATGTGCCCTTCCACTGCGATGCTGAGAGTTAAAGCTGTTGACCTCGTCAACGGATTGCCATGGTCACGACGGTGCGATCACCGATATTTATTATCAGGGATGATCT
TCGCCAGAAAATCAGTGCAATCGCGTGAGAGTTACGCGAACTAA
Protein sequenceShow/hide protein sequence
MKVLEAKAVWEGLKSLINLPGKPMEIEVESDCLELINSLTKVEEDLSELKDFVEAILGLSQTLGVLRFKHCPRRQNGVAHSLAREGLGLIAVLVFLFRDRGSFPCWKEKV
VFGPLISRVLSPPLFSRTVVLVSVVLHFEVLACGFLKTMCPSTAMLRVKAVDLVNGLPWSRRCDHRYLLSGMIFARKSVQSRESYAN