CuGenDBv2

Gene ID	Lag0034517
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Helicase ATP-binding domain-containing protein
Genome location	chr3:8057947..8064885
RNA-Seq Expression	Lag0034517
Synteny	Lag0034517
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6588018.1 hypothetical protein SDJN03_16583, partial [Cucurbita argyrosperma subsp. sororia]

1.2e-101

93.47

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Query:  MAIKRLARILMKSREDGSSLPTRDDPSIDDSRPIDSQAQEEMVRSFEKANEQQSHLWRTVFAAFLFCFAAFLLYSIVQQVSSPWELRYHAYFMEDVDSWM
        MAIK+LAR+LMKSREDG SLPTRDDPSIDDSRPIDSQAQEEMVRSFE+AN+QQS LWRTVFAAFLFCFA FLLYSI+QQVSSPWELRYHAYFMEDV SWM
Subjt:  MAIKRLARILMKSREDGSSLPTRDDPSIDDSRPIDSQAQEEMVRSFEKANEQQSHLWRTVFAAFLFCFAAFLLYSIVQQVSSPWELRYHAYFMEDVDSWM

Query:  IIAADWVAILACSLSIIGIVSKSNYNRRWLWCSFFIGILLSVFWLYFMMSLPRFRWDVIWRPFGPLSGAGICLYVDHLLAESSEEIRKLRGYMYSYKAN
        IIAADWVAILACS SIIGIVSKSNY+RRWLWCSFFIG LLSVFWLYFM+SLPRFRWDVIWRPFGPLSGAGICLYVDHLLAESSEEIRKLRGYMYSYKAN
Subjt:  IIAADWVAILACSLSIIGIVSKSNYNRRWLWCSFFIGILLSVFWLYFMMSLPRFRWDVIWRPFGPLSGAGICLYVDHLLAESSEEIRKLRGYMYSYKAN

XP_022927992.1 uncharacterized protein LOC111434892 [Cucurbita moschata]

4.4e-101

92.96

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Query:  MAIKRLARILMKSREDGSSLPTRDDPSIDDSRPIDSQAQEEMVRSFEKANEQQSHLWRTVFAAFLFCFAAFLLYSIVQQVSSPWELRYHAYFMEDVDSWM
        MAIK+LAR+LMKSREDG SLPTRDDPSIDDSRPIDSQAQEEMVRSFE+AN+QQS LWRTVFAAFLFCFA FLLYSI+ QVSSPWELRYHAYFMEDV SWM
Subjt:  MAIKRLARILMKSREDGSSLPTRDDPSIDDSRPIDSQAQEEMVRSFEKANEQQSHLWRTVFAAFLFCFAAFLLYSIVQQVSSPWELRYHAYFMEDVDSWM

Query:  IIAADWVAILACSLSIIGIVSKSNYNRRWLWCSFFIGILLSVFWLYFMMSLPRFRWDVIWRPFGPLSGAGICLYVDHLLAESSEEIRKLRGYMYSYKAN
        IIAADWVAILACS SIIGIVSKSNY+RRWLWCSFFIG LLSVFWLYFM+SLPRFRWDVIWRPFGPLSGAGICLYVDHLLAESSEEIRKLRGYMYSYKAN
Subjt:  IIAADWVAILACSLSIIGIVSKSNYNRRWLWCSFFIGILLSVFWLYFMMSLPRFRWDVIWRPFGPLSGAGICLYVDHLLAESSEEIRKLRGYMYSYKAN

XP_023002535.1 uncharacterized protein LOC111496345 [Cucurbita maxima]

7.5e-101

92.96

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Query:  MAIKRLARILMKSREDGSSLPTRDDPSIDDSRPIDSQAQEEMVRSFEKANEQQSHLWRTVFAAFLFCFAAFLLYSIVQQVSSPWELRYHAYFMEDVDSWM
        MAIK+LAR+LMKSREDG SLPTRDDPSIDDSRPIDSQAQEEMVRSFE+AN+QQS LWRTVFAAFLFCFA FLLYSI+QQVSSPWELRYHAYFMEDV SWM
Subjt:  MAIKRLARILMKSREDGSSLPTRDDPSIDDSRPIDSQAQEEMVRSFEKANEQQSHLWRTVFAAFLFCFAAFLLYSIVQQVSSPWELRYHAYFMEDVDSWM

Query:  IIAADWVAILACSLSIIGIVSKSNYNRRWLWCSFFIGILLSVFWLYFMMSLPRFRWDVIWRPFGPLSGAGICLYVDHLLAESSEEIRKLRGYMYSYKAN
        IIAADWVAILACS SIIGIVSKSNY+RRWLWCSFFIG LLSVFWLYFM+SLPRFRWDVIWRPFG LSGAGICLYVDHLLAESSEEIRKLRGYMYSYKAN
Subjt:  IIAADWVAILACSLSIIGIVSKSNYNRRWLWCSFFIGILLSVFWLYFMMSLPRFRWDVIWRPFGPLSGAGICLYVDHLLAESSEEIRKLRGYMYSYKAN

XP_023531869.1 uncharacterized protein LOC111794002 [Cucurbita pepo subsp. pepo]

1.4e-99

91.96

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Query:  MAIKRLARILMKSREDGSSLPTRDDPSIDDSRPIDSQAQEEMVRSFEKANEQQSHLWRTVFAAFLFCFAAFLLYSIVQQVSSPWELRYHAYFMEDVDSWM
        MAIK+LAR+LMKSREDG SLPTRDDPSIDDSRPIDSQAQEEMVRSFE+A++QQS LWRTVFAAFLFCFA FLLYSI+ QVSSPWELRYHAYFMEDV SWM
Subjt:  MAIKRLARILMKSREDGSSLPTRDDPSIDDSRPIDSQAQEEMVRSFEKANEQQSHLWRTVFAAFLFCFAAFLLYSIVQQVSSPWELRYHAYFMEDVDSWM

Query:  IIAADWVAILACSLSIIGIVSKSNYNRRWLWCSFFIGILLSVFWLYFMMSLPRFRWDVIWRPFGPLSGAGICLYVDHLLAESSEEIRKLRGYMYSYKAN
        IIAADWVAILACS SIIGIVSKSNY+RRWLWCSFFIG LLSVFWLYFM+SLPRFRWDVIWRPFG LSGAGICLYVDHLLAESSEEIRKLRGYMYSYKAN
Subjt:  IIAADWVAILACSLSIIGIVSKSNYNRRWLWCSFFIGILLSVFWLYFMMSLPRFRWDVIWRPFGPLSGAGICLYVDHLLAESSEEIRKLRGYMYSYKAN

XP_038880203.1 uncharacterized protein LOC120071865 isoform X2 [Benincasa hispida]

3.1e-99

90.95

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Query:  MAIKRLARILMKSREDGSSLPTRDDPSIDDSRPIDSQAQEEMVRSFEKANEQQSHLWRTVFAAFLFCFAAFLLYSIVQQVSSPWELRYHAYFMEDVDSWM
        MAIK+LARILMKSR++  SLPTRDDPS+DD RPIDSQAQEEMVRSFE+AN+QQS LWRTVFA FLFC+AAFLLYSIVQQVSSPWELRYHAYFMEDVDSWM
Subjt:  MAIKRLARILMKSREDGSSLPTRDDPSIDDSRPIDSQAQEEMVRSFEKANEQQSHLWRTVFAAFLFCFAAFLLYSIVQQVSSPWELRYHAYFMEDVDSWM

Query:  IIAADWVAILACSLSIIGIVSKSNYNRRWLWCSFFIGILLSVFWLYFMMSLPRFRWDVIWRPFGPLSGAGICLYVDHLLAESSEEIRKLRGYMYSYKAN
        IIAADWVAILAC+ SI+GIVSKSNY+RRWLWCSFFIGILLSVFWLYFMMSLPRFRWDVIWRPFGPLSG GICLYVDHLLAES+EEIRKLRGYMYSYKAN
Subjt:  IIAADWVAILACSLSIIGIVSKSNYNRRWLWCSFFIGILLSVFWLYFMMSLPRFRWDVIWRPFGPLSGAGICLYVDHLLAESSEEIRKLRGYMYSYKAN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LYS6 Uncharacterized protein

8.6e-95

87.44

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Query:  MAIKRLARILMKSREDGSSLPTRDDPSIDDSRPIDSQAQEEMVRSFEKANEQQSHLWRTVFAAFLFCFAAFLLYSIVQQVSSPWELRYHAYFMEDVDSWM
        MAIK+LARILMKSR+   SLPTRDDPS DDSRPIDSQ QEEMVRS E+AN+QQS LWRTVFA FLFC+A FLLYSI QQ+SSPWELRYHAYFMEDVDSWM
Subjt:  MAIKRLARILMKSREDGSSLPTRDDPSIDDSRPIDSQAQEEMVRSFEKANEQQSHLWRTVFAAFLFCFAAFLLYSIVQQVSSPWELRYHAYFMEDVDSWM

Query:  IIAADWVAILACSLSIIGIVSKSNYNRRWLWCSFFIGILLSVFWLYFMMSLPRFRWDVIWRPFGPLSGAGICLYVDHLLAESSEEIRKLRGYMYSYKAN
        IIAADWVAILAC+ SIIGIVSKS+++RRWLWCSFFIGILLSVFW YFMMSLP+FRWDVIW P GPLSGAGICLYVDHLLAESSEEIRKLRGYMYSYKAN
Subjt:  IIAADWVAILACSLSIIGIVSKSNYNRRWLWCSFFIGILLSVFWLYFMMSLPRFRWDVIWRPFGPLSGAGICLYVDHLLAESSEEIRKLRGYMYSYKAN

A0A1S3BQS5 uncharacterized protein LOC103492288 isoform X2

4.6e-96

87.44

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Query:  MAIKRLARILMKSREDGSSLPTRDDPSIDDSRPIDSQAQEEMVRSFEKANEQQSHLWRTVFAAFLFCFAAFLLYSIVQQVSSPWELRYHAYFMEDVDSWM
        MAIK+LARILMKSR+D  SLPTRDDPS DD RPID+Q QEEMVRSFE+AN+QQS LWRTVFA FLFC+A FLLYSI+QQ+SSPWELRYHAYFMEDVDSWM
Subjt:  MAIKRLARILMKSREDGSSLPTRDDPSIDDSRPIDSQAQEEMVRSFEKANEQQSHLWRTVFAAFLFCFAAFLLYSIVQQVSSPWELRYHAYFMEDVDSWM

Query:  IIAADWVAILACSLSIIGIVSKSNYNRRWLWCSFFIGILLSVFWLYFMMSLPRFRWDVIWRPFGPLSGAGICLYVDHLLAESSEEIRKLRGYMYSYKAN
        IIAADWVAILAC+ SI+GIVSKS+++RRWLWCSFFIGILLSVFW YFMMSLPRFRWDVIW PFGPLSGAGICLYVDHLL ESSEEIRKLRGYMYSYKAN
Subjt:  IIAADWVAILACSLSIIGIVSKSNYNRRWLWCSFFIGILLSVFWLYFMMSLPRFRWDVIWRPFGPLSGAGICLYVDHLLAESSEEIRKLRGYMYSYKAN

A0A5D3CE29 Uncharacterized protein

4.6e-96

87.44

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Query:  MAIKRLARILMKSREDGSSLPTRDDPSIDDSRPIDSQAQEEMVRSFEKANEQQSHLWRTVFAAFLFCFAAFLLYSIVQQVSSPWELRYHAYFMEDVDSWM
        MAIK+LARILMKSR+D  SLPTRDDPS DD RPID+Q QEEMVRSFE+AN+QQS LWRTVFA FLFC+A FLLYSI+QQ+SSPWELRYHAYFMEDVDSWM
Subjt:  MAIKRLARILMKSREDGSSLPTRDDPSIDDSRPIDSQAQEEMVRSFEKANEQQSHLWRTVFAAFLFCFAAFLLYSIVQQVSSPWELRYHAYFMEDVDSWM

Query:  IIAADWVAILACSLSIIGIVSKSNYNRRWLWCSFFIGILLSVFWLYFMMSLPRFRWDVIWRPFGPLSGAGICLYVDHLLAESSEEIRKLRGYMYSYKAN
        IIAADWVAILAC+ SI+GIVSKS+++RRWLWCSFFIGILLSVFW YFMMSLPRFRWDVIW PFGPLSGAGICLYVDHLL ESSEEIRKLRGYMYSYKAN
Subjt:  IIAADWVAILACSLSIIGIVSKSNYNRRWLWCSFFIGILLSVFWLYFMMSLPRFRWDVIWRPFGPLSGAGICLYVDHLLAESSEEIRKLRGYMYSYKAN

A0A6J1EIP3 uncharacterized protein LOC111434892

2.1e-101

92.96

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Query:  MAIKRLARILMKSREDGSSLPTRDDPSIDDSRPIDSQAQEEMVRSFEKANEQQSHLWRTVFAAFLFCFAAFLLYSIVQQVSSPWELRYHAYFMEDVDSWM
        MAIK+LAR+LMKSREDG SLPTRDDPSIDDSRPIDSQAQEEMVRSFE+AN+QQS LWRTVFAAFLFCFA FLLYSI+ QVSSPWELRYHAYFMEDV SWM
Subjt:  MAIKRLARILMKSREDGSSLPTRDDPSIDDSRPIDSQAQEEMVRSFEKANEQQSHLWRTVFAAFLFCFAAFLLYSIVQQVSSPWELRYHAYFMEDVDSWM

Query:  IIAADWVAILACSLSIIGIVSKSNYNRRWLWCSFFIGILLSVFWLYFMMSLPRFRWDVIWRPFGPLSGAGICLYVDHLLAESSEEIRKLRGYMYSYKAN
        IIAADWVAILACS SIIGIVSKSNY+RRWLWCSFFIG LLSVFWLYFM+SLPRFRWDVIWRPFGPLSGAGICLYVDHLLAESSEEIRKLRGYMYSYKAN
Subjt:  IIAADWVAILACSLSIIGIVSKSNYNRRWLWCSFFIGILLSVFWLYFMMSLPRFRWDVIWRPFGPLSGAGICLYVDHLLAESSEEIRKLRGYMYSYKAN

A0A6J1KP79 uncharacterized protein LOC111496345

3.6e-101

92.96

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Query:  MAIKRLARILMKSREDGSSLPTRDDPSIDDSRPIDSQAQEEMVRSFEKANEQQSHLWRTVFAAFLFCFAAFLLYSIVQQVSSPWELRYHAYFMEDVDSWM
        MAIK+LAR+LMKSREDG SLPTRDDPSIDDSRPIDSQAQEEMVRSFE+AN+QQS LWRTVFAAFLFCFA FLLYSI+QQVSSPWELRYHAYFMEDV SWM
Subjt:  MAIKRLARILMKSREDGSSLPTRDDPSIDDSRPIDSQAQEEMVRSFEKANEQQSHLWRTVFAAFLFCFAAFLLYSIVQQVSSPWELRYHAYFMEDVDSWM

Query:  IIAADWVAILACSLSIIGIVSKSNYNRRWLWCSFFIGILLSVFWLYFMMSLPRFRWDVIWRPFGPLSGAGICLYVDHLLAESSEEIRKLRGYMYSYKAN
        IIAADWVAILACS SIIGIVSKSNY+RRWLWCSFFIG LLSVFWLYFM+SLPRFRWDVIWRPFG LSGAGICLYVDHLLAESSEEIRKLRGYMYSYKAN
Subjt:  IIAADWVAILACSLSIIGIVSKSNYNRRWLWCSFFIGILLSVFWLYFMMSLPRFRWDVIWRPFGPLSGAGICLYVDHLLAESSEEIRKLRGYMYSYKAN

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G26240.1 unknown protein

1.2e-67

61.5

Show/hide

Query:  IKRLARILMKSREDGSS----LPTRDDPSIDDSRPIDSQAQEEMVRSFEKANEQQSHLWRTVFAAFLFCFAAFLLYSIVQQVSSPWELRYHAYFMEDVDS
        +K+LAR   ++R D       LPT +D    DSRPID+Q QEE VR  E+A+ QQS  WR+VF   L CF AFL YSI QQ  SPWELRYHAYFMED+ S
Subjt:  IKRLARILMKSREDGSS----LPTRDDPSIDDSRPIDSQAQEEMVRSFEKANEQQSHLWRTVFAAFLFCFAAFLLYSIVQQVSSPWELRYHAYFMEDVDS

Query:  WMIIAADWVAILACSLSIIGIVSKSNYNRRWLWCSFFIGILLSVFWLYFMMSLPRFRWDVIWRPFGPLSGAGICLYVDHLLAESSEEIRKLRGYMYSYKA
        WM+I+A+W+AI+ACSLSI+G+  K N +RRW W S  +G  L++FWLY+++ LP+FRWD IW PFGPL GAGICLYVDHLL ESSEE++KLR YMY+YKA
Subjt:  WMIIAADWVAILACSLSIIGIVSKSNYNRRWLWCSFFIGILLSVFWLYFMMSLPRFRWDVIWRPFGPLSGAGICLYVDHLLAESSEEIRKLRGYMYSYKA

Sequences

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CDS sequence

Show/hide CDS sequence

ATGAAATTGACGGAAAGTGAGAGATGCACGAGAAATATTAAGCTCACTCGTGACAAGGCAAGTGCAGTGAGTAAATGTCCAATCAAATTGTTTGACCGTGACACGTTGGC
AAACCAATTCGGGCGGTTGCTCAGTCTCCGGCTATCTGACTTCTTCAATTTTGGCAGCAAACTCAGAACCCGATCACGGCGTGCTTCCGACGCAGAGTTGAAAATGGCGA
TCAAGAGATTAGCTAGAATTTTGATGAAATCTCGTGAAGATGGATCGTCTCTTCCTACTCGGGACGATCCATCCATTGACGATTCCCGTCCCATTGATAGCCAAGCCCAA
GAGGAAATGGTTCGTTCGTTCGAAAAGGCAAATGAACAACAGAGTCATTTATGGAGGACCGTGTTTGCGGCATTTCTCTTTTGCTTCGCGGCATTTCTTCTTTACTCAAT
CGTTCAGCAGGTTTCATCTCCATGGGAACTGCGTTATCATGCTTACTTCATGGAGGATGTTGACTCATGGATGATTATAGCTGCAGATTGGGTTGCTATTTTAGCGTGTT
CGCTTTCGATCATTGGGATTGTTAGCAAGTCAAATTACAATCGGCGATGGCTTTGGTGCTCATTCTTTATTGGCATCCTACTCTCAGTTTTCTGGTTATATTTTATGATG
AGTTTGCCTAGGTTTCGATGGGATGTTATCTGGCGTCCTTTTGGTCCTCTCAGTGGGGCTGGAATCTGTTTGTATGTAGATCATTTGCTAGCCGAATCGTCAGAGGAAAT
AAGAAAACTTAGAGGCTATATGTATTCTTATAAAGCTAACTAA

mRNA sequence

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Protein sequence

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MKLTESERCTRNIKLTRDKASAVSKCPIKLFDRDTLANQFGRLLSLRLSDFFNFGSKLRTRSRRASDAELKMAIKRLARILMKSREDGSSLPTRDDPSIDDSRPIDSQAQ
EEMVRSFEKANEQQSHLWRTVFAAFLFCFAAFLLYSIVQQVSSPWELRYHAYFMEDVDSWMIIAADWVAILACSLSIIGIVSKSNYNRRWLWCSFFIGILLSVFWLYFMM
SLPRFRWDVIWRPFGPLSGAGICLYVDHLLAESSEEIRKLRGYMYSYKAN

Lag0034517 (gene) of Sponge gourd (AG-4) v1 genome