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Lag0034522 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0034522
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr3:8093015..8093326
RNA-Seq ExpressionLag0034522
SyntenyLag0034522
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050064.1 hypothetical protein E6C27_scaffold675G00450 [Cucumis melo var. makuwa]5.2e-1852.29Show/hide
Query:  AVKSLNASEIKLALVFLVSVAILAPWVTVAVPDSS-------LTDDDSIKACVPLIFEATMCVADIIKFPISAHPSCCKAISMANDCSPEFLKHISPTEM
        A KS +AS I+LALVFLV + ILAP VT      +       L  D S   C P I EATMC+ D+IK P++ HPSCCKAIS  NDC+PE   HI    M
Subjt:  AVKSLNASEIKLALVFLVSVAILAPWVTVAVPDSS-------LTDDDSIKACVPLIFEATMCVADIIKFPISAHPSCCKAISMANDCSPEFLKHISPTEM

Query:  NIIKKICSL
        ++IKKIC L
Subjt:  NIIKKICSL

KAA0050069.1 hypothetical protein E6C27_scaffold675G00500 [Cucumis melo var. makuwa]2.9e-2154.63Show/hide
Query:  MAVKSLNASEIKLALVFLVSVAILAPWVTV-----AVPDSSLTDDDSIKACVPLIFEATMCVADIIKFPISAHPSCCKAISMANDCSPEFLKHISPTEMN
        MA +SLN S +KL LVFLV +AILAP  T+     A P  S+  +     C P I EAT+CV D+IKFPI+ HPSCCKAIS  NDC+PE  + I   +M+
Subjt:  MAVKSLNASEIKLALVFLVSVAILAPWVTV-----AVPDSSLTDDDSIKACVPLIFEATMCVADIIKFPISAHPSCCKAISMANDCSPEFLKHISPTEMN

Query:  IIKKICSL
        +IKKICSL
Subjt:  IIKKICSL

KAA0050072.1 hypothetical protein E6C27_scaffold675G00540 [Cucumis melo var. makuwa]6.1e-1952.78Show/hide
Query:  MAVKSLNASEIKLALVFLVSVAILAPWVTVAVPDSSLTDDDSIK------ACVPLIFEATMCVADIIKFPISAHPSCCKAISMANDCSPEFLKHISPTEM
        MAVKSL AS IK A VF+VS+AILA  VT     SS T D S+       +C P IF+ T+C+ D+ KFPIS HP CCKAI   NDC+P   + I P +M
Subjt:  MAVKSLNASEIKLALVFLVSVAILAPWVTVAVPDSSLTDDDSIK------ACVPLIFEATMCVADIIKFPISAHPSCCKAISMANDCSPEFLKHISPTEM

Query:  NIIKKICS
        ++IKKIC+
Subjt:  NIIKKICS

TYK10334.1 hypothetical protein E5676_scaffold367G00080 [Cucumis melo var. makuwa]1.3e-1651.02Show/hide
Query:  IKLALVFLVSVAILAP-----WVTVAVPDSSLTDDDSIKACVPLIFEATMCVADIIKFPISAHPSCCKAISMANDCSPEFLKHISPTEMNIIKKICSL
        +KL LVFLV +AILAP       T A P  S+  +     C P I EAT+CV  +IKFPI+ HPSCCKAIS   DC+P+  + I  ++MN+IKK CSL
Subjt:  IKLALVFLVSVAILAP-----WVTVAVPDSSLTDDDSIKACVPLIFEATMCVADIIKFPISAHPSCCKAISMANDCSPEFLKHISPTEMNIIKKICSL

TYK10344.1 hypothetical protein E5676_scaffold367G00200 [Cucumis melo var. makuwa]3.0e-1852.29Show/hide
Query:  AVKSLNASEIKLALVFLVSVAILAPWVTVAVPDSS-------LTDDDSIKACVPLIFEATMCVADIIKFPISAHPSCCKAISMANDCSPEFLKHISPTEM
        A KS +AS I+LALVFLV + ILAP VT      +       L  D S   C P I EATMC+ D+IK P++ HPSCCKAIS  NDC+PE  +HI    M
Subjt:  AVKSLNASEIKLALVFLVSVAILAPWVTVAVPDSS-------LTDDDSIKACVPLIFEATMCVADIIKFPISAHPSCCKAISMANDCSPEFLKHISPTEM

Query:  NIIKKICSL
        ++IKKIC L
Subjt:  NIIKKICSL

TrEMBL top hitse value%identityAlignment
A0A0A0LTD6 Uncharacterized protein2.3e-1952.73Show/hide
Query:  AVKSLNASEIKLALVFLVSVAILAPWVT----VAVPDSSLT----DDDSIKACVPLIFEATMCVADIIKFPISAHPSCCKAISMANDCSPEFLKHISPTE
        A KS +AS I+LA+VFLV + ILAP VT       P   L     DD S   C P I EATMCV D+IK P+++HPSCCKAIS  NDC+P+  +HI   +
Subjt:  AVKSLNASEIKLALVFLVSVAILAPWVT----VAVPDSSLT----DDDSIKACVPLIFEATMCVADIIKFPISAHPSCCKAISMANDCSPEFLKHISPTE

Query:  MNIIKKICSL
        M++IKKIC L
Subjt:  MNIIKKICSL

A0A5A7U2L3 Uncharacterized protein2.9e-1952.78Show/hide
Query:  MAVKSLNASEIKLALVFLVSVAILAPWVTVAVPDSSLTDDDSIK------ACVPLIFEATMCVADIIKFPISAHPSCCKAISMANDCSPEFLKHISPTEM
        MAVKSL AS IK A VF+VS+AILA  VT     SS T D S+       +C P IF+ T+C+ D+ KFPIS HP CCKAI   NDC+P   + I P +M
Subjt:  MAVKSLNASEIKLALVFLVSVAILAPWVTVAVPDSSLTDDDSIK------ACVPLIFEATMCVADIIKFPISAHPSCCKAISMANDCSPEFLKHISPTEM

Query:  NIIKKICS
        ++IKKIC+
Subjt:  NIIKKICS

A0A5A7U4A7 Uncharacterized protein2.5e-1852.29Show/hide
Query:  AVKSLNASEIKLALVFLVSVAILAPWVTVAVPDSS-------LTDDDSIKACVPLIFEATMCVADIIKFPISAHPSCCKAISMANDCSPEFLKHISPTEM
        A KS +AS I+LALVFLV + ILAP VT      +       L  D S   C P I EATMC+ D+IK P++ HPSCCKAIS  NDC+PE   HI    M
Subjt:  AVKSLNASEIKLALVFLVSVAILAPWVTVAVPDSS-------LTDDDSIKACVPLIFEATMCVADIIKFPISAHPSCCKAISMANDCSPEFLKHISPTEM

Query:  NIIKKICSL
        ++IKKIC L
Subjt:  NIIKKICSL

A0A5A7U9A1 Uncharacterized protein1.4e-2154.63Show/hide
Query:  MAVKSLNASEIKLALVFLVSVAILAPWVTV-----AVPDSSLTDDDSIKACVPLIFEATMCVADIIKFPISAHPSCCKAISMANDCSPEFLKHISPTEMN
        MA +SLN S +KL LVFLV +AILAP  T+     A P  S+  +     C P I EAT+CV D+IKFPI+ HPSCCKAIS  NDC+PE  + I   +M+
Subjt:  MAVKSLNASEIKLALVFLVSVAILAPWVTV-----AVPDSSLTDDDSIKACVPLIFEATMCVADIIKFPISAHPSCCKAISMANDCSPEFLKHISPTEMN

Query:  IIKKICSL
        +IKKICSL
Subjt:  IIKKICSL

A0A5D3CGL7 Uncharacterized protein1.5e-1852.29Show/hide
Query:  AVKSLNASEIKLALVFLVSVAILAPWVTVAVPDSS-------LTDDDSIKACVPLIFEATMCVADIIKFPISAHPSCCKAISMANDCSPEFLKHISPTEM
        A KS +AS I+LALVFLV + ILAP VT      +       L  D S   C P I EATMC+ D+IK P++ HPSCCKAIS  NDC+PE  +HI    M
Subjt:  AVKSLNASEIKLALVFLVSVAILAPWVTVAVPDSS-------LTDDDSIKACVPLIFEATMCVADIIKFPISAHPSCCKAISMANDCSPEFLKHISPTEM

Query:  NIIKKICSL
        ++IKKIC L
Subjt:  NIIKKICSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGTAAAGTCCTTGAATGCATCCGAAATAAAGTTAGCACTTGTATTCCTAGTATCCGTAGCCATTTTAGCTCCATGGGTGACGGTGGCGGTGCCTGATTCGTCGTT
AACAGATGATGACTCTATCAAAGCTTGTGTACCGTTGATTTTTGAGGCGACAATGTGTGTGGCGGATATCATCAAGTTTCCAATTTCTGCTCATCCTTCTTGTTGCAAAG
CAATTTCTATGGCCAATGACTGTTCCCCCGAGTTTCTCAAACACATTTCCCCTACTGAGATGAATATTATTAAGAAGATTTGTTCTTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGTAAAGTCCTTGAATGCATCCGAAATAAAGTTAGCACTTGTATTCCTAGTATCCGTAGCCATTTTAGCTCCATGGGTGACGGTGGCGGTGCCTGATTCGTCGTT
AACAGATGATGACTCTATCAAAGCTTGTGTACCGTTGATTTTTGAGGCGACAATGTGTGTGGCGGATATCATCAAGTTTCCAATTTCTGCTCATCCTTCTTGTTGCAAAG
CAATTTCTATGGCCAATGACTGTTCCCCCGAGTTTCTCAAACACATTTCCCCTACTGAGATGAATATTATTAAGAAGATTTGTTCTTTGTAA
Protein sequenceShow/hide protein sequence
MAVKSLNASEIKLALVFLVSVAILAPWVTVAVPDSSLTDDDSIKACVPLIFEATMCVADIIKFPISAHPSCCKAISMANDCSPEFLKHISPTEMNIIKKICSL