; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0034539 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0034539
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCytidine deaminase
Genome locationchr3:8253692..8254294
RNA-Seq ExpressionLag0034539
SyntenyLag0034539
Gene Ontology termsGO:0009972 - cytidine deamination (biological process)
GO:0005829 - cytosol (cellular component)
GO:0004126 - cytidine deaminase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0047844 - deoxycytidine deaminase activity (molecular function)
InterPro domainsIPR002125 - Cytidine and deoxycytidylate deaminase domain
IPR016193 - Cytidine deaminase-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004135706.1 cytidine deaminase 1 [Cucumis sativus]1.5e-4291.26Show/hide
Query:  MDGPRFVIEASEAESMAKQSGLTIPQLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNSESHLNFLAVS
        MDG RFVIEA EAES+AKQS LTIP LLP+LVKSAQSLARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLH SVHAEQFLVTNLALN+ESHLN+LAVS
Subjt:  MDGPRFVIEASEAESMAKQSGLTIPQLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNSESHLNFLAVS

Query:  AAP
        AAP
Subjt:  AAP

XP_008450845.1 PREDICTED: cytidine deaminase 1-like [Cucumis melo]1.1e-4392.23Show/hide
Query:  MDGPRFVIEASEAESMAKQSGLTIPQLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNSESHLNFLAVS
        MDGPRFVIEASEAE++AKQS LTIP LLP+LVKSAQSLARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLH SVHAEQFLVTNLALN+ESHLN+LAVS
Subjt:  MDGPRFVIEASEAESMAKQSGLTIPQLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNSESHLNFLAVS

Query:  AAP
        AAP
Subjt:  AAP

XP_022961088.1 cytidine deaminase 1-like [Cucurbita moschata]2.5e-4596.12Show/hide
Query:  MDGPRFVIEASEAESMAKQSGLTIPQLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNSESHLNFLAVS
        MDGPRFVIEASEAESMAKQSGLTIP LLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTN ALN+ES LNFLAVS
Subjt:  MDGPRFVIEASEAESMAKQSGLTIPQLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNSESHLNFLAVS

Query:  AAP
        AAP
Subjt:  AAP

XP_022987806.1 cytidine deaminase 1-like [Cucurbita maxima]3.0e-4697.09Show/hide
Query:  MDGPRFVIEASEAESMAKQSGLTIPQLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNSESHLNFLAVS
        MDGPRFVIEASEAESMAKQSGLTIP LLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTN ALN+ESHLNFLAVS
Subjt:  MDGPRFVIEASEAESMAKQSGLTIPQLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNSESHLNFLAVS

Query:  AAP
        AAP
Subjt:  AAP

XP_023516485.1 cytidine deaminase 1-like [Cucurbita pepo subsp. pepo]3.0e-4697.09Show/hide
Query:  MDGPRFVIEASEAESMAKQSGLTIPQLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNSESHLNFLAVS
        MDGPRFVIEASEAESMAKQSGLTIP LLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTN ALN+ESHLNFLAVS
Subjt:  MDGPRFVIEASEAESMAKQSGLTIPQLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNSESHLNFLAVS

Query:  AAP
        AAP
Subjt:  AAP

TrEMBL top hitse value%identityAlignment
A0A0A0LYU5 Cytidine deaminase7.4e-4391.26Show/hide
Query:  MDGPRFVIEASEAESMAKQSGLTIPQLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNSESHLNFLAVS
        MDG RFVIEA EAES+AKQS LTIP LLP+LVKSAQSLARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLH SVHAEQFLVTNLALN+ESHLN+LAVS
Subjt:  MDGPRFVIEASEAESMAKQSGLTIPQLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNSESHLNFLAVS

Query:  AAP
        AAP
Subjt:  AAP

A0A1S3BQV2 Cytidine deaminase5.1e-4492.23Show/hide
Query:  MDGPRFVIEASEAESMAKQSGLTIPQLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNSESHLNFLAVS
        MDGPRFVIEASEAE++AKQS LTIP LLP+LVKSAQSLARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLH SVHAEQFLVTNLALN+ESHLN+LAVS
Subjt:  MDGPRFVIEASEAESMAKQSGLTIPQLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNSESHLNFLAVS

Query:  AAP
        AAP
Subjt:  AAP

A0A5D3CE07 Cytidine deaminase5.1e-4492.23Show/hide
Query:  MDGPRFVIEASEAESMAKQSGLTIPQLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNSESHLNFLAVS
        MDGPRFVIEASEAE++AKQS LTIP LLP+LVKSAQSLARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLH SVHAEQFLVTNLALN+ESHLN+LAVS
Subjt:  MDGPRFVIEASEAESMAKQSGLTIPQLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNSESHLNFLAVS

Query:  AAP
        AAP
Subjt:  AAP

A0A6J1HAV6 Cytidine deaminase1.2e-4596.12Show/hide
Query:  MDGPRFVIEASEAESMAKQSGLTIPQLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNSESHLNFLAVS
        MDGPRFVIEASEAESMAKQSGLTIP LLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTN ALN+ES LNFLAVS
Subjt:  MDGPRFVIEASEAESMAKQSGLTIPQLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNSESHLNFLAVS

Query:  AAP
        AAP
Subjt:  AAP

A0A6J1JFD6 Cytidine deaminase1.4e-4697.09Show/hide
Query:  MDGPRFVIEASEAESMAKQSGLTIPQLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNSESHLNFLAVS
        MDGPRFVIEASEAESMAKQSGLTIP LLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTN ALN+ESHLNFLAVS
Subjt:  MDGPRFVIEASEAESMAKQSGLTIPQLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNSESHLNFLAVS

Query:  AAP
        AAP
Subjt:  AAP

SwissProt top hitse value%identityAlignment
O65571 Cytidine deaminase 29.7e-2462.5Show/hide
Query:  RFVIEASEAESMAKQSGLTIPQLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNSESHLNFLAVS
        +FV  A+E    A   G+T P  LP+L++ A  LAR PISKY VGAVG  SSGRV+ GVN++FPGLPLHHS+HAEQFLVTNLALN E  L  LAV+
Subjt:  RFVIEASEAESMAKQSGLTIPQLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNSESHLNFLAVS

O65896 Cytidine deaminase 15.0e-3673.79Show/hide
Query:  MDGPRFVIEASEAESMAKQSGLTIPQLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNSESHLNFLAVS
        MD P FVI++ EAES AKQ G+++ QLLPSLVK AQS AR PISK++V  VGLGSSGR+F GVN+EFP LPLHHS+HAEQFLVTNL LN E HLNF AVS
Subjt:  MDGPRFVIEASEAESMAKQSGLTIPQLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNSESHLNFLAVS

Query:  AAP
        AAP
Subjt:  AAP

Q9S847 Cytidine deaminase 33.0e-2562.63Show/hide
Query:  DGPRFVIEASEAESMAKQSGLTIPQLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNSESHLNFLAVS
        D  +FV  A EAES     G+T P  LP+L+  A SLA  PISKY VGAVG   SGR++ GVN+E PGLPLHHS+HAEQFLVTNLALNSE  L+ LAV+
Subjt:  DGPRFVIEASEAESMAKQSGLTIPQLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNSESHLNFLAVS

Q9SU86 Cytidine deaminase 61.2e-2155.77Show/hide
Query:  RFVIEASEAESMAKQSGLTIPQLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNSESHLNFLAVSAAPA
        +FV   SE    A + G+  P  LP L+  A SLAR P+S + VGAVGL SSG VF GVN+EFP LPLHH++HAEQFLVTNLALNS   L  +AVS    
Subjt:  RFVIEASEAESMAKQSGLTIPQLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNSESHLNFLAVSAAPA

Query:  AIAA
           A
Subjt:  AIAA

Q9SU87 Cytidine deaminase 73.0e-2561.9Show/hide
Query:  DGPRFVIEASEAESMAKQSGLTIPQLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNSESHLNFLAVSA
        D  +FV  A EA S     G+T P  LP L++ A SLAR PISKY VGAVG  SSGRV+ GVN+EFPGLPLHHS+H EQFLVTNLALNSE  L  LAV+ 
Subjt:  DGPRFVIEASEAESMAKQSGLTIPQLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNSESHLNFLAVSA

Query:  APAAI
        +   I
Subjt:  APAAI

Arabidopsis top hitse value%identityAlignment
AT2G19570.1 cytidine deaminase 13.5e-3773.79Show/hide
Query:  MDGPRFVIEASEAESMAKQSGLTIPQLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNSESHLNFLAVS
        MD P FVI++ EAES AKQ G+++ QLLPSLVK AQS AR PISK++V  VGLGSSGR+F GVN+EFP LPLHHS+HAEQFLVTNL LN E HLNF AVS
Subjt:  MDGPRFVIEASEAESMAKQSGLTIPQLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNSESHLNFLAVS

Query:  AAP
        AAP
Subjt:  AAP

AT4G29600.1 Cytidine/deoxycytidylate deaminase family protein2.1e-2661.9Show/hide
Query:  DGPRFVIEASEAESMAKQSGLTIPQLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNSESHLNFLAVSA
        D  +FV  A EA S     G+T P  LP L++ A SLAR PISKY VGAVG  SSGRV+ GVN+EFPGLPLHHS+H EQFLVTNLALNSE  L  LAV+ 
Subjt:  DGPRFVIEASEAESMAKQSGLTIPQLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNSESHLNFLAVSA

Query:  APAAI
        +   I
Subjt:  APAAI

AT4G29610.1 Cytidine/deoxycytidylate deaminase family protein8.4e-2355.77Show/hide
Query:  RFVIEASEAESMAKQSGLTIPQLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNSESHLNFLAVSAAPA
        +FV   SE    A + G+  P  LP L+  A SLAR P+S + VGAVGL SSG VF GVN+EFP LPLHH++HAEQFLVTNLALNS   L  +AVS    
Subjt:  RFVIEASEAESMAKQSGLTIPQLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNSESHLNFLAVSAAPA

Query:  AIAA
           A
Subjt:  AIAA

AT4G29620.1 Cytidine/deoxycytidylate deaminase family protein6.9e-2562.5Show/hide
Query:  RFVIEASEAESMAKQSGLTIPQLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNSESHLNFLAVS
        +FV  A+E    A   G+T P  LP+L++ A  LAR PISKY VGAVG  SSGRV+ GVN++FPGLPLHHS+HAEQFLVTNLALN E  L  LAV+
Subjt:  RFVIEASEAESMAKQSGLTIPQLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNSESHLNFLAVS

AT4G29630.1 Cytidine/deoxycytidylate deaminase family protein2.1e-2662.63Show/hide
Query:  DGPRFVIEASEAESMAKQSGLTIPQLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNSESHLNFLAVS
        D  +FV  A EAES     G+T P  LP+L+  A SLA  PISKY VGAVG   SGR++ GVN+E PGLPLHHS+HAEQFLVTNLALNSE  L+ LAV+
Subjt:  DGPRFVIEASEAESMAKQSGLTIPQLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNSESHLNFLAVS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGGACCTAGGTTCGTAATCGAAGCATCAGAAGCCGAATCCATGGCGAAACAATCAGGCCTCACAATCCCTCAGCTCCTTCCATCTCTGGTCAAATCGGCGCAGAG
CCTAGCCCGGCCGCCGATCTCGAAATACCACGTCGGCGCCGTCGGCCTCGGATCCTCCGGCCGAGTGTTCTTCGGCGTCAATCTCGAATTCCCTGGCCTTCCTCTTCATC
ACTCTGTTCACGCCGAACAATTCCTCGTCACAAATCTCGCCCTCAACTCCGAATCTCACCTCAATTTCCTCGCCGTCTCCGCCGCCCCTGCGGCCATTGCCGCCAATTCC
TCCAAGAAGTCCGCTCCTCCGCCGAGATCAAAATCCTCGTCACCTCAAACGAAAACCAATCCGAATCCGATTCCAAATCCAACGATTACGTTCCTCTCCCCCAATTTCTC
CCTCACCGATTCGGCCCCGACGACCTCCTCGATAAGGACGTTCCGTTGCTCCTCGAGCCACGATTTAACGGCCTCTCCCTGCCGGAAAAATCCGCCAGAGATCATCCACT
CTGTAATGGCGCTCACGGCGGCGATTTGGAGAAACTCAAACGCGCCGCCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGACGGACCTAGGTTCGTAATCGAAGCATCAGAAGCCGAATCCATGGCGAAACAATCAGGCCTCACAATCCCTCAGCTCCTTCCATCTCTGGTCAAATCGGCGCAGAG
CCTAGCCCGGCCGCCGATCTCGAAATACCACGTCGGCGCCGTCGGCCTCGGATCCTCCGGCCGAGTGTTCTTCGGCGTCAATCTCGAATTCCCTGGCCTTCCTCTTCATC
ACTCTGTTCACGCCGAACAATTCCTCGTCACAAATCTCGCCCTCAACTCCGAATCTCACCTCAATTTCCTCGCCGTCTCCGCCGCCCCTGCGGCCATTGCCGCCAATTCC
TCCAAGAAGTCCGCTCCTCCGCCGAGATCAAAATCCTCGTCACCTCAAACGAAAACCAATCCGAATCCGATTCCAAATCCAACGATTACGTTCCTCTCCCCCAATTTCTC
CCTCACCGATTCGGCCCCGACGACCTCCTCGATAAGGACGTTCCGTTGCTCCTCGAGCCACGATTTAACGGCCTCTCCCTGCCGGAAAAATCCGCCAGAGATCATCCACT
CTGTAATGGCGCTCACGGCGGCGATTTGGAGAAACTCAAACGCGCCGCCCTAG
Protein sequenceShow/hide protein sequence
MDGPRFVIEASEAESMAKQSGLTIPQLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHHSVHAEQFLVTNLALNSESHLNFLAVSAAPAAIAANS
SKKSAPPPRSKSSSPQTKTNPNPIPNPTITFLSPNFSLTDSAPTTSSIRTFRCSSSHDLTASPCRKNPPEIIHSVMALTAAIWRNSNAPP