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Lag0034540 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0034540
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCytidine deaminase
Genome locationchr3:8254306..8254608
RNA-Seq ExpressionLag0034540
SyntenyLag0034540
Gene Ontology termsGO:0009972 - cytidine deamination (biological process)
GO:0005829 - cytosol (cellular component)
GO:0004126 - cytidine deaminase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0047844 - deoxycytidine deaminase activity (molecular function)
InterPro domainsIPR002125 - Cytidine and deoxycytidylate deaminase domain
IPR013171 - Cytidine/deoxycytidylate deaminase, zinc-binding domain
IPR016193 - Cytidine deaminase-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7021930.1 Cytidine deaminase 1, partial [Cucurbita argyrosperma subsp. argyrosperma]2.6e-3884Show/hide
Query:  MSHAPYSKCPSGVALLDADGRIYRGSYMESAAYNPSMGPVQAALVAYVAGGDGGRYEKIVGAVLVEKDGVEVKQEHTARLLLQMISPECELRVVHCIAAV
        +SHAPYSKCPSGVA++DADGRIY+G YMESAAYNPSMGPVQAA++AYV+GG  G YEKIV AVLVEK+GVEVKQEHTARLLLQ+ISP CE RVVHCIAAV
Subjt:  MSHAPYSKCPSGVALLDADGRIYRGSYMESAAYNPSMGPVQAALVAYVAGGDGGRYEKIVGAVLVEKDGVEVKQEHTARLLLQMISPECELRVVHCIAAV

KAG7023653.1 Cytidine deaminase 1, partial [Cucurbita argyrosperma subsp. argyrosperma]2.3e-3984Show/hide
Query:  MSHAPYSKCPSGVALLDADGRIYRGSYMESAAYNPSMGPVQAALVAYVAGGDGGRYEKIVGAVLVEKDGVEVKQEHTARLLLQMISPECELRVVHCIAAV
        MSHAPYS+CPSGVAL+D DG+IY+GSYMESAAYNPSMGPVQ A+V+YVAGG GG YE+IV AVLVEKDGV+VKQEHTARLLLQ ISPECE RVVHC+AAV
Subjt:  MSHAPYSKCPSGVALLDADGRIYRGSYMESAAYNPSMGPVQAALVAYVAGGDGGRYEKIVGAVLVEKDGVEVKQEHTARLLLQMISPECELRVVHCIAAV

XP_022961088.1 cytidine deaminase 1-like [Cucurbita moschata]2.3e-3984Show/hide
Query:  MSHAPYSKCPSGVALLDADGRIYRGSYMESAAYNPSMGPVQAALVAYVAGGDGGRYEKIVGAVLVEKDGVEVKQEHTARLLLQMISPECELRVVHCIAAV
        MSHAPYS+CPSGVAL+D DG+IY+GSYMESAAYNPSMGPVQ A+V+YVAGG GG YE+IV AVLVEKDGV+VKQEHTARLLLQ ISPECE RVVHC+AAV
Subjt:  MSHAPYSKCPSGVALLDADGRIYRGSYMESAAYNPSMGPVQAALVAYVAGGDGGRYEKIVGAVLVEKDGVEVKQEHTARLLLQMISPECELRVVHCIAAV

XP_022987806.1 cytidine deaminase 1-like [Cucurbita maxima]7.9e-4085Show/hide
Query:  MSHAPYSKCPSGVALLDADGRIYRGSYMESAAYNPSMGPVQAALVAYVAGGDGGRYEKIVGAVLVEKDGVEVKQEHTARLLLQMISPECELRVVHCIAAV
        MSHAPYS+CPSGVAL+DADG+IY+GSYMESAAYNPSMGPVQ A+V+YVAGG GG YE+IV AVLVEKDGV+VKQEHTARLLLQ ISPECE RVVHC+AAV
Subjt:  MSHAPYSKCPSGVALLDADGRIYRGSYMESAAYNPSMGPVQAALVAYVAGGDGGRYEKIVGAVLVEKDGVEVKQEHTARLLLQMISPECELRVVHCIAAV

XP_023516485.1 cytidine deaminase 1-like [Cucurbita pepo subsp. pepo]2.0e-3883Show/hide
Query:  MSHAPYSKCPSGVALLDADGRIYRGSYMESAAYNPSMGPVQAALVAYVAGGDGGRYEKIVGAVLVEKDGVEVKQEHTARLLLQMISPECELRVVHCIAAV
        MSHAPYS+CPSGVAL+D DG+IY+GSYMESAAYNPSMGPVQ A+V+YVAGG GG YE+IV AVLVEKDGV+VKQE TARLLLQ ISPECE RVVHC+AAV
Subjt:  MSHAPYSKCPSGVALLDADGRIYRGSYMESAAYNPSMGPVQAALVAYVAGGDGGRYEKIVGAVLVEKDGVEVKQEHTARLLLQMISPECELRVVHCIAAV

TrEMBL top hitse value%identityAlignment
A0A5D3CE07 Cytidine deaminase8.9e-3782Show/hide
Query:  MSHAPYSKCPSGVALLDADGRIYRGSYMESAAYNPSMGPVQAALVAYVAGGDGGRYEKIVGAVLVEKDGVEVKQEHTARLLLQMISPECELRVVHCIAAV
        MSHAPYSKCPSGVAL+D +GRIY G YMESAAYNPSMGPVQAA+VAY+AGG  G YE+IV AVLVEKDGVEVKQE  ARLLL+ ISPECE  VVHCIAAV
Subjt:  MSHAPYSKCPSGVALLDADGRIYRGSYMESAAYNPSMGPVQAALVAYVAGGDGGRYEKIVGAVLVEKDGVEVKQEHTARLLLQMISPECELRVVHCIAAV

A0A6J1E9M2 Cytidine deaminase2.8e-3884Show/hide
Query:  MSHAPYSKCPSGVALLDADGRIYRGSYMESAAYNPSMGPVQAALVAYVAGGDGGRYEKIVGAVLVEKDGVEVKQEHTARLLLQMISPECELRVVHCIAAV
        +SHAPYSKCPSGVAL+DADGRIY+G YMESAAYNPSMGPVQAA++AYV+GG  G YE IV AVLVEK+GVEVKQEHTARLLLQ+ISP CE RVVHCIAAV
Subjt:  MSHAPYSKCPSGVALLDADGRIYRGSYMESAAYNPSMGPVQAALVAYVAGGDGGRYEKIVGAVLVEKDGVEVKQEHTARLLLQMISPECELRVVHCIAAV

A0A6J1HAV6 Cytidine deaminase1.1e-3984Show/hide
Query:  MSHAPYSKCPSGVALLDADGRIYRGSYMESAAYNPSMGPVQAALVAYVAGGDGGRYEKIVGAVLVEKDGVEVKQEHTARLLLQMISPECELRVVHCIAAV
        MSHAPYS+CPSGVAL+D DG+IY+GSYMESAAYNPSMGPVQ A+V+YVAGG GG YE+IV AVLVEKDGV+VKQEHTARLLLQ ISPECE RVVHC+AAV
Subjt:  MSHAPYSKCPSGVALLDADGRIYRGSYMESAAYNPSMGPVQAALVAYVAGGDGGRYEKIVGAVLVEKDGVEVKQEHTARLLLQMISPECELRVVHCIAAV

A0A6J1I4F3 Cytidine deaminase1.6e-3883Show/hide
Query:  MSHAPYSKCPSGVALLDADGRIYRGSYMESAAYNPSMGPVQAALVAYVAGGDGGRYEKIVGAVLVEKDGVEVKQEHTARLLLQMISPECELRVVHCIAAV
        +SHAPYSKCPSGVA++DADGR+Y+G YMESAAYNPSMGPVQAA++AYV+GG  G YEKIV AVLVEK+GVEVKQEHTARLLLQ+ISP CE RVVHCIAAV
Subjt:  MSHAPYSKCPSGVALLDADGRIYRGSYMESAAYNPSMGPVQAALVAYVAGGDGGRYEKIVGAVLVEKDGVEVKQEHTARLLLQMISPECELRVVHCIAAV

A0A6J1JFD6 Cytidine deaminase3.8e-4085Show/hide
Query:  MSHAPYSKCPSGVALLDADGRIYRGSYMESAAYNPSMGPVQAALVAYVAGGDGGRYEKIVGAVLVEKDGVEVKQEHTARLLLQMISPECELRVVHCIAAV
        MSHAPYS+CPSGVAL+DADG+IY+GSYMESAAYNPSMGPVQ A+V+YVAGG GG YE+IV AVLVEKDGV+VKQEHTARLLLQ ISPECE RVVHC+AAV
Subjt:  MSHAPYSKCPSGVALLDADGRIYRGSYMESAAYNPSMGPVQAALVAYVAGGDGGRYEKIVGAVLVEKDGVEVKQEHTARLLLQMISPECELRVVHCIAAV

SwissProt top hitse value%identityAlignment
O65571 Cytidine deaminase 26.3e-2457.89Show/hide
Query:  SHAPYSKCPSGVALLDADGRIYRGSYMESAAYNPSMGPVQAALVAYVAGGDGGRYEKIVGAVLVEKDGVEVKQEHTARLLLQMISPECELRVVHC
        S +PY++ PSGVALLD DG  YRG Y+ES A NPS+GPVQAALV +VA   G  + KIV AVLVEK+   V QE TA+++L  I+P C+ +V HC
Subjt:  SHAPYSKCPSGVALLDADGRIYRGSYMESAAYNPSMGPVQAALVAYVAGGDGGRYEKIVGAVLVEKDGVEVKQEHTARLLLQMISPECELRVVHC

O65896 Cytidine deaminase 12.1e-3573.47Show/hide
Query:  SHAPYSKCPSGVALLDADGRIYRGSYMESAAYNPSMGPVQAALVAYVAGGDGGRYEKIVGAVLVEKDGVEVKQEHTARLLLQMISPECELRVVHCIAA
        S+APYS CPSGV+L+D DG++YRG YMESAAYNPSMGPVQAALV YVA G GG YE+IVGAVLVEK+   V+QEHTARLLL+ ISP+CE +V HC  A
Subjt:  SHAPYSKCPSGVALLDADGRIYRGSYMESAAYNPSMGPVQAALVAYVAGGDGGRYEKIVGAVLVEKDGVEVKQEHTARLLLQMISPECELRVVHCIAA

Q9SU86 Cytidine deaminase 61.1e-2356.84Show/hide
Query:  SHAPYSKCPSGVALLDADGRIYRGSYMESAAYNPSMGPVQAALVAYVAGGDGGRYEKIVGAVLVEKDGVEVKQEHTARLLLQMISPECELRVVHC
        S+APYSKCPSGVAL+   G +Y+G Y+ES AYNPS+GPV+AALV +VA G G  + +I   VLVE   V+V QE TAR  L  I+P+C+ +V+HC
Subjt:  SHAPYSKCPSGVALLDADGRIYRGSYMESAAYNPSMGPVQAALVAYVAGGDGGRYEKIVGAVLVEKDGVEVKQEHTARLLLQMISPECELRVVHC

Q9SU87 Cytidine deaminase 75.9e-2255.21Show/hide
Query:  SHAPYSKCPSGVALLDADGRIYRGSYMESAAYNPSMGPVQAALVAYVAGGDGGRYEKIVGAVLVEKDGVEVKQEHTARLLLQMI-SPECELRVVHC
        S +PY++ PSGVAL D +G+ YRG Y+ES AY+PS+GPVQAALV +VA   G  + KIV AVLVEK+   V QE TA+++L  I +P C+ +V HC
Subjt:  SHAPYSKCPSGVALLDADGRIYRGSYMESAAYNPSMGPVQAALVAYVAGGDGGRYEKIVGAVLVEKDGVEVKQEHTARLLLQMI-SPECELRVVHC

Q9XEX4 Cytidine deaminase 83.7e-2458.76Show/hide
Query:  MSHAPYSKCPSGVALLDADGRIYRGSYMESAAYNPSMGPVQAALVAYVAGGDGGRYEKIVGAVLVEKDGVEVKQEHTARLLLQMIS-PECELRVVHC
        +S+AP SKCPSGVAL+D  G++Y G YMES A+N S+GPVQAALV +VA GDG  ++ IV AVLVEK    + QE TAR++L+ I+ P+C  RV+HC
Subjt:  MSHAPYSKCPSGVALLDADGRIYRGSYMESAAYNPSMGPVQAALVAYVAGGDGGRYEKIVGAVLVEKDGVEVKQEHTARLLLQMIS-PECELRVVHC

Arabidopsis top hitse value%identityAlignment
AT2G19570.1 cytidine deaminase 11.5e-3673.47Show/hide
Query:  SHAPYSKCPSGVALLDADGRIYRGSYMESAAYNPSMGPVQAALVAYVAGGDGGRYEKIVGAVLVEKDGVEVKQEHTARLLLQMISPECELRVVHCIAA
        S+APYS CPSGV+L+D DG++YRG YMESAAYNPSMGPVQAALV YVA G GG YE+IVGAVLVEK+   V+QEHTARLLL+ ISP+CE +V HC  A
Subjt:  SHAPYSKCPSGVALLDADGRIYRGSYMESAAYNPSMGPVQAALVAYVAGGDGGRYEKIVGAVLVEKDGVEVKQEHTARLLLQMISPECELRVVHCIAA

AT4G29570.1 Cytidine/deoxycytidylate deaminase family protein2.6e-2558.76Show/hide
Query:  MSHAPYSKCPSGVALLDADGRIYRGSYMESAAYNPSMGPVQAALVAYVAGGDGGRYEKIVGAVLVEKDGVEVKQEHTARLLLQMIS-PECELRVVHC
        +S+AP SKCPSGVAL+D  G++Y G YMES A+N S+GPVQAALV +VA GDG  ++ IV AVLVEK    + QE TAR++L+ I+ P+C  RV+HC
Subjt:  MSHAPYSKCPSGVALLDADGRIYRGSYMESAAYNPSMGPVQAALVAYVAGGDGGRYEKIVGAVLVEKDGVEVKQEHTARLLLQMIS-PECELRVVHC

AT4G29600.1 Cytidine/deoxycytidylate deaminase family protein4.2e-2355.21Show/hide
Query:  SHAPYSKCPSGVALLDADGRIYRGSYMESAAYNPSMGPVQAALVAYVAGGDGGRYEKIVGAVLVEKDGVEVKQEHTARLLLQMI-SPECELRVVHC
        S +PY++ PSGVAL D +G+ YRG Y+ES AY+PS+GPVQAALV +VA   G  + KIV AVLVEK+   V QE TA+++L  I +P C+ +V HC
Subjt:  SHAPYSKCPSGVALLDADGRIYRGSYMESAAYNPSMGPVQAALVAYVAGGDGGRYEKIVGAVLVEKDGVEVKQEHTARLLLQMI-SPECELRVVHC

AT4G29610.1 Cytidine/deoxycytidylate deaminase family protein7.7e-2556.84Show/hide
Query:  SHAPYSKCPSGVALLDADGRIYRGSYMESAAYNPSMGPVQAALVAYVAGGDGGRYEKIVGAVLVEKDGVEVKQEHTARLLLQMISPECELRVVHC
        S+APYSKCPSGVAL+   G +Y+G Y+ES AYNPS+GPV+AALV +VA G G  + +I   VLVE   V+V QE TAR  L  I+P+C+ +V+HC
Subjt:  SHAPYSKCPSGVALLDADGRIYRGSYMESAAYNPSMGPVQAALVAYVAGGDGGRYEKIVGAVLVEKDGVEVKQEHTARLLLQMISPECELRVVHC

AT4G29620.1 Cytidine/deoxycytidylate deaminase family protein4.5e-2557.89Show/hide
Query:  SHAPYSKCPSGVALLDADGRIYRGSYMESAAYNPSMGPVQAALVAYVAGGDGGRYEKIVGAVLVEKDGVEVKQEHTARLLLQMISPECELRVVHC
        S +PY++ PSGVALLD DG  YRG Y+ES A NPS+GPVQAALV +VA   G  + KIV AVLVEK+   V QE TA+++L  I+P C+ +V HC
Subjt:  SHAPYSKCPSGVALLDADGRIYRGSYMESAAYNPSMGPVQAALVAYVAGGDGGRYEKIVGAVLVEKDGVEVKQEHTARLLLQMISPECELRVVHC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCCACGCGCCGTACAGTAAATGTCCGTCGGGAGTTGCGTTATTGGACGCCGATGGACGAATCTACAGAGGATCGTACATGGAATCGGCGGCGTATAATCCGAGTAT
GGGACCGGTGCAGGCGGCGTTGGTGGCATACGTGGCCGGCGGCGATGGTGGCAGGTATGAAAAGATCGTGGGCGCCGTGTTGGTGGAGAAGGACGGCGTGGAAGTGAAGC
AAGAACACACGGCGAGGCTGTTGCTGCAGATGATCTCGCCGGAGTGCGAATTGAGAGTGGTTCATTGTATCGCCGCCGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCCACGCGCCGTACAGTAAATGTCCGTCGGGAGTTGCGTTATTGGACGCCGATGGACGAATCTACAGAGGATCGTACATGGAATCGGCGGCGTATAATCCGAGTAT
GGGACCGGTGCAGGCGGCGTTGGTGGCATACGTGGCCGGCGGCGATGGTGGCAGGTATGAAAAGATCGTGGGCGCCGTGTTGGTGGAGAAGGACGGCGTGGAAGTGAAGC
AAGAACACACGGCGAGGCTGTTGCTGCAGATGATCTCGCCGGAGTGCGAATTGAGAGTGGTTCATTGTATCGCCGCCGTGTGA
Protein sequenceShow/hide protein sequence
MSHAPYSKCPSGVALLDADGRIYRGSYMESAAYNPSMGPVQAALVAYVAGGDGGRYEKIVGAVLVEKDGVEVKQEHTARLLLQMISPECELRVVHCIAAV