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Lag0034544 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0034544
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionWD repeat containing protein
Genome locationchr3:8267823..8270106
RNA-Seq ExpressionLag0034544
SyntenyLag0034544
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588036.1 hypothetical protein SDJN03_16601, partial [Cucurbita argyrosperma subsp. sororia]5.6e-4680.8Show/hide
Query:  MADPRPPLPSPSSPPSLPPNDSLPRRFKVIWRVLLISNFALSAYLFASARKKDLGQMENDQVEKDSGQPENDGVEKQSDSEVIAEIPSTFMVDTTGIVTE
        MADPR  L S SSPPSLPPND LPRRFKV+WRVLLISNFALSAY+FASARKKDLGQMEND+ EKD GQ ENDG+EK SDSE++ EIPSTFMVDTTGIVTE
Subjt:  MADPRPPLPSPSSPPSLPPNDSLPRRFKVIWRVLLISNFALSAYLFASARKKDLGQMENDQVEKDSGQPENDGVEKQSDSEVIAEIPSTFMVDTTGIVTE

Query:  NISEDQKQEPFQWMFHGWREKIGDS
        NISEDQ Q+PF W+  GWREK G S
Subjt:  NISEDQKQEPFQWMFHGWREKIGDS

XP_004135711.1 uncharacterized protein LOC101210247 isoform X1 [Cucumis sativus]1.5e-3568.8Show/hide
Query:  MADPRPPLPSPSSPPSLPPNDSLPRRFKVIWRVLLISNFALSAYLFASARKKDLGQMENDQVEKDSGQPENDGVEKQSDSEVIAEIPSTFMVDTTGIVTE
        M DPR PLPS SS   LPPNDSLP+RFKV+WRVLLISNFALSAY+FASARK+   Q+ENDQ            VEKQSDSE+I EIPST MVDTTGIVTE
Subjt:  MADPRPPLPSPSSPPSLPPNDSLPRRFKVIWRVLLISNFALSAYLFASARKKDLGQMENDQVEKDSGQPENDGVEKQSDSEVIAEIPSTFMVDTTGIVTE

Query:  NISEDQKQEPFQWMFHGWREKIGDS
        N+ EDQ+QEP Q +  GWREK+G S
Subjt:  NISEDQKQEPFQWMFHGWREKIGDS

XP_022926648.1 uncharacterized protein LOC111433716 [Cucurbita moschata]3.1e-4479.2Show/hide
Query:  MADPRPPLPSPSSPPSLPPNDSLPRRFKVIWRVLLISNFALSAYLFASARKKDLGQMENDQVEKDSGQPENDGVEKQSDSEVIAEIPSTFMVDTTGIVTE
        MADPR  L S SSPPSL PND LPRRFKV+WRVLLISNFALSAY+FASARKKDLGQMEN++ EKD GQ ENDG+EK SDSE++ EIPSTFMVDTTGIVTE
Subjt:  MADPRPPLPSPSSPPSLPPNDSLPRRFKVIWRVLLISNFALSAYLFASARKKDLGQMENDQVEKDSGQPENDGVEKQSDSEVIAEIPSTFMVDTTGIVTE

Query:  NISEDQKQEPFQWMFHGWREKIGDS
        NISEDQ Q+PF W+  GWREK G S
Subjt:  NISEDQKQEPFQWMFHGWREKIGDS

XP_022968528.1 uncharacterized protein LOC111467730 isoform X1 [Cucurbita maxima]8.0e-4579.2Show/hide
Query:  MADPRPPLPSPSSPPSLPPNDSLPRRFKVIWRVLLISNFALSAYLFASARKKDLGQMENDQVEKDSGQPENDGVEKQSDSEVIAEIPSTFMVDTTGIVTE
        MADPR  L S SSPPSLPPND LPRRFKV+WRVLLISNFALSAY+FASARKKDLGQME+D+ EKD GQ ENDG+EK SDSE++ EIPSTFMVDTTGIVTE
Subjt:  MADPRPPLPSPSSPPSLPPNDSLPRRFKVIWRVLLISNFALSAYLFASARKKDLGQMENDQVEKDSGQPENDGVEKQSDSEVIAEIPSTFMVDTTGIVTE

Query:  NISEDQKQEPFQWMFHGWREKIGDS
        NI EDQ Q+PF W+  GWREK G S
Subjt:  NISEDQKQEPFQWMFHGWREKIGDS

XP_023530326.1 uncharacterized protein LOC111792930 [Cucurbita pepo subsp. pepo]2.8e-4580Show/hide
Query:  MADPRPPLPSPSSPPSLPPNDSLPRRFKVIWRVLLISNFALSAYLFASARKKDLGQMENDQVEKDSGQPENDGVEKQSDSEVIAEIPSTFMVDTTGIVTE
        MADPR  L S SSPPSLPPND LPRRFKV+WRVLLISNFALSAY+FASARKKDLGQMEND+ EKD GQ ENDG+EK SDSE++ EIPST MVDTTGIVTE
Subjt:  MADPRPPLPSPSSPPSLPPNDSLPRRFKVIWRVLLISNFALSAYLFASARKKDLGQMENDQVEKDSGQPENDGVEKQSDSEVIAEIPSTFMVDTTGIVTE

Query:  NISEDQKQEPFQWMFHGWREKIGDS
        NISEDQ Q+PF W+  GWREK G S
Subjt:  NISEDQKQEPFQWMFHGWREKIGDS

TrEMBL top hitse value%identityAlignment
A0A0A0M1X9 Uncharacterized protein7.3e-3668.8Show/hide
Query:  MADPRPPLPSPSSPPSLPPNDSLPRRFKVIWRVLLISNFALSAYLFASARKKDLGQMENDQVEKDSGQPENDGVEKQSDSEVIAEIPSTFMVDTTGIVTE
        M DPR PLPS SS   LPPNDSLP+RFKV+WRVLLISNFALSAY+FASARK+   Q+ENDQ            VEKQSDSE+I EIPST MVDTTGIVTE
Subjt:  MADPRPPLPSPSSPPSLPPNDSLPRRFKVIWRVLLISNFALSAYLFASARKKDLGQMENDQVEKDSGQPENDGVEKQSDSEVIAEIPSTFMVDTTGIVTE

Query:  NISEDQKQEPFQWMFHGWREKIGDS
        N+ EDQ+QEP Q +  GWREK+G S
Subjt:  NISEDQKQEPFQWMFHGWREKIGDS

A0A1S3BR82 uncharacterized protein LOC1034923201.5e-3365.6Show/hide
Query:  MADPRPPLPSPSSPPSLPPNDSLPRRFKVIWRVLLISNFALSAYLFASARKKDLGQMENDQVEKDSGQPENDGVEKQSDSEVIAEIPSTFMVDTTGIVTE
        M   R PLPS SS   LPPNDSLP+RFKV+WR+LLISNFALSAY+FASARK+   ++ENDQ            VEKQSDSE+I EIPST MVDTTGIVTE
Subjt:  MADPRPPLPSPSSPPSLPPNDSLPRRFKVIWRVLLISNFALSAYLFASARKKDLGQMENDQVEKDSGQPENDGVEKQSDSEVIAEIPSTFMVDTTGIVTE

Query:  NISEDQKQEPFQWMFHGWREKIGDS
        N+ EDQ+QEP Q +  GWREK+G S
Subjt:  NISEDQKQEPFQWMFHGWREKIGDS

A0A6J1D315 uncharacterized protein LOC1110165448.4e-3268.97Show/hide
Query:  MADPRPPLPSPSS-PPSLPPNDSLPRRFKVIWRVLLISNFALSAYLFASARKKDLGQMENDQVEKDSGQPENDGVEKQSDSEVIAEIPSTFMVDTTGIVT
        M DPR PLPS SS PP LPPND LPRRFKVIWRVLLISNFAL+AY+FA+ARKKDLG+ME D             VEK SD EV+  IPST MVDTT I  
Subjt:  MADPRPPLPSPSS-PPSLPPNDSLPRRFKVIWRVLLISNFALSAYLFASARKKDLGQMENDQVEKDSGQPENDGVEKQSDSEVIAEIPSTFMVDTTGIVT

Query:  ENISEDQKQEPFQWMF
        ENISED ++EPFQWMF
Subjt:  ENISEDQKQEPFQWMF

A0A6J1EIP0 uncharacterized protein LOC1114337161.5e-4479.2Show/hide
Query:  MADPRPPLPSPSSPPSLPPNDSLPRRFKVIWRVLLISNFALSAYLFASARKKDLGQMENDQVEKDSGQPENDGVEKQSDSEVIAEIPSTFMVDTTGIVTE
        MADPR  L S SSPPSL PND LPRRFKV+WRVLLISNFALSAY+FASARKKDLGQMEN++ EKD GQ ENDG+EK SDSE++ EIPSTFMVDTTGIVTE
Subjt:  MADPRPPLPSPSSPPSLPPNDSLPRRFKVIWRVLLISNFALSAYLFASARKKDLGQMENDQVEKDSGQPENDGVEKQSDSEVIAEIPSTFMVDTTGIVTE

Query:  NISEDQKQEPFQWMFHGWREKIGDS
        NISEDQ Q+PF W+  GWREK G S
Subjt:  NISEDQKQEPFQWMFHGWREKIGDS

A0A6J1HYA0 uncharacterized protein LOC111467730 isoform X13.9e-4579.2Show/hide
Query:  MADPRPPLPSPSSPPSLPPNDSLPRRFKVIWRVLLISNFALSAYLFASARKKDLGQMENDQVEKDSGQPENDGVEKQSDSEVIAEIPSTFMVDTTGIVTE
        MADPR  L S SSPPSLPPND LPRRFKV+WRVLLISNFALSAY+FASARKKDLGQME+D+ EKD GQ ENDG+EK SDSE++ EIPSTFMVDTTGIVTE
Subjt:  MADPRPPLPSPSSPPSLPPNDSLPRRFKVIWRVLLISNFALSAYLFASARKKDLGQMENDQVEKDSGQPENDGVEKQSDSEVIAEIPSTFMVDTTGIVTE

Query:  NISEDQKQEPFQWMFHGWREKIGDS
        NI EDQ Q+PF W+  GWREK G S
Subjt:  NISEDQKQEPFQWMFHGWREKIGDS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G55160.1 unknown protein7.6e-0936.7Show/hide
Query:  SSPPSLPPNDSLPRRFKVIWRVLLISNFALSAYLFASARKKDLGQMENDQVEKDSGQPENDGVEKQSDSEVIAEIPSTFMVDTTGIVTENISEDQKQEPF
        S PP  PP +S  RR+K +W +LL  N A+  YLF   +KKDL  +  +   K S       VEK   S V+AE P            E I E Q++E F
Subjt:  SSPPSLPPNDSLPRRFKVIWRVLLISNFALSAYLFASARKKDLGQMENDQVEKDSGQPENDGVEKQSDSEVIAEIPSTFMVDTTGIVTENISEDQKQEPF

Query:  QWMFHGWRE
        +WM    R+
Subjt:  QWMFHGWRE

AT1G55160.2 unknown protein7.6e-0936.7Show/hide
Query:  SSPPSLPPNDSLPRRFKVIWRVLLISNFALSAYLFASARKKDLGQMENDQVEKDSGQPENDGVEKQSDSEVIAEIPSTFMVDTTGIVTENISEDQKQEPF
        S PP  PP +S  RR+K +W +LL  N A+  YLF   +KKDL  +  +   K S       VEK   S V+AE P            E I E Q++E F
Subjt:  SSPPSLPPNDSLPRRFKVIWRVLLISNFALSAYLFASARKKDLGQMENDQVEKDSGQPENDGVEKQSDSEVIAEIPSTFMVDTTGIVTENISEDQKQEPF

Query:  QWMFHGWRE
        +WM    R+
Subjt:  QWMFHGWRE

AT1G55160.3 unknown protein8.7e-0529.85Show/hide
Query:  SSPPSLPPNDSLPRRFKVIWRVLLISNFAL-------------------------SAYLFASARKKDLGQMENDQVEKDSGQPENDGVEKQSDSEVIAEI
        S PP  PP +S  RR+K +W +LL  N A+                          +YLF   +KKDL  +  +   K S       VEK   S V+AE 
Subjt:  SSPPSLPPNDSLPRRFKVIWRVLLISNFAL-------------------------SAYLFASARKKDLGQMENDQVEKDSGQPENDGVEKQSDSEVIAEI

Query:  PSTFMVDTTGIVTENISEDQKQEPFQWMFHGWRE
        P            E I E Q++E F+WM    R+
Subjt:  PSTFMVDTTGIVTENISEDQKQEPFQWMFHGWRE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGATCCACGACCGCCACTGCCATCTCCATCTTCACCGCCGTCTTTACCTCCCAATGATTCGCTACCCAGACGGTTCAAGGTCATCTGGCGCGTTCTATTGATCTC
CAATTTCGCCCTTTCAGCCTACCTGTTTGCAAGTGCAAGGAAGAAAGATTTGGGTCAAATGGAGAATGATCAAGTAGAGAAAGATTCGGGTCAACCGGAAAATGATGGAG
TAGAAAAACAAAGTGACAGTGAAGTTATTGCGGAAATCCCCTCAACATTTATGGTGGATACCACTGGCATAGTTACTGAGAACATCTCTGAAGATCAGAAGCAAGAACCA
TTCCAGTGGATGTTTCATGGTTGGAGAGAAAAGATAGGCGATTCTCTAGGAGACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGATCCACGACCGCCACTGCCATCTCCATCTTCACCGCCGTCTTTACCTCCCAATGATTCGCTACCCAGACGGTTCAAGGTCATCTGGCGCGTTCTATTGATCTC
CAATTTCGCCCTTTCAGCCTACCTGTTTGCAAGTGCAAGGAAGAAAGATTTGGGTCAAATGGAGAATGATCAAGTAGAGAAAGATTCGGGTCAACCGGAAAATGATGGAG
TAGAAAAACAAAGTGACAGTGAAGTTATTGCGGAAATCCCCTCAACATTTATGGTGGATACCACTGGCATAGTTACTGAGAACATCTCTGAAGATCAGAAGCAAGAACCA
TTCCAGTGGATGTTTCATGGTTGGAGAGAAAAGATAGGCGATTCTCTAGGAGACTGA
Protein sequenceShow/hide protein sequence
MADPRPPLPSPSSPPSLPPNDSLPRRFKVIWRVLLISNFALSAYLFASARKKDLGQMENDQVEKDSGQPENDGVEKQSDSEVIAEIPSTFMVDTTGIVTENISEDQKQEP
FQWMFHGWREKIGDSLGD