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Lag0034595 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0034595
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPhotosystem II PsbX
Genome locationchr3:8741592..8741957
RNA-Seq ExpressionLag0034595
SyntenyLag0034595
Gene Ontology termsGO:0015979 - photosynthesis (biological process)
GO:0009523 - photosystem II (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR009518 - Photosystem II PsbX


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7023687.1 Mechanosensitive ion channel protein 10, partial [Cucurbita argyrosperma subsp. argyrosperma]2.7e-4284.13Show/hide
Query:  MASTSALSMALPLTHATHRRLSNDAFFNPLPL------RKAIAAAAPTSNGRLVVVRSSLKEKAVTGLTAAALTAAMVIPEVAEAAGPGVSPSLKNFLLS
        MASTSA+S+ALPLT+ATH+RLSN AFFNPLP       RKAI AAAPTSNG LV VRSSLKEKA+TGLTAAALTA+MVIPEVAEAAGPGVSPSLKNFLLS
Subjt:  MASTSALSMALPLTHATHRRLSNDAFFNPLPL------RKAIAAAAPTSNGRLVVVRSSLKEKAVTGLTAAALTAAMVIPEVAEAAGPGVSPSLKNFLLS

Query:  IAAGGVVVFAILGAVIGVANFDPVKR
        IAAGG VV AILGAVIGV+NFDPVKR
Subjt:  IAAGGVVVFAILGAVIGVANFDPVKR

XP_008450907.1 PREDICTED: uncharacterized protein LOC103492356 [Cucumis melo]1.1e-4083.06Show/hide
Query:  MASTSALSMALPLTHATHRRLSNDAFFNPLP---LRKAIAAAAPTSNGRLVVVRSSLKEKAVTGLTAAALTAAMVIPEVAEAAGPGVSPSLKNFLLSIAA
        MASTSA+SMALP THATH+ LSNDAFFNPLP    RK I AAAP SNGR+V VRSSLKEKAV G+TAAAL A+MVIPEVAEAAG GVSPSLKNFLLSIAA
Subjt:  MASTSALSMALPLTHATHRRLSNDAFFNPLP---LRKAIAAAAPTSNGRLVVVRSSLKEKAVTGLTAAALTAAMVIPEVAEAAGPGVSPSLKNFLLSIAA

Query:  GGVVVFAILGAVIGVANFDPVKRS
        GG VV AI GAVIGVANFDPVKRS
Subjt:  GGVVVFAILGAVIGVANFDPVKRS

XP_022960741.1 uncharacterized protein LOC111461452 [Cucurbita moschata]6.0e-4283.33Show/hide
Query:  MASTSALSMALPLTHATHRRLSNDAFFNPLPL------RKAIAAAAPTSNGRLVVVRSSLKEKAVTGLTAAALTAAMVIPEVAEAAGPGVSPSLKNFLLS
        MASTS +S+ALPLT+ATH+RLSN AFFNPLP       RKAI AAAPTS+GRLV VRSSLKEKA+TGLTAAALTA+MVIPEVAEAAGPGVSPSLKNFLLS
Subjt:  MASTSALSMALPLTHATHRRLSNDAFFNPLPL------RKAIAAAAPTSNGRLVVVRSSLKEKAVTGLTAAALTAAMVIPEVAEAAGPGVSPSLKNFLLS

Query:  IAAGGVVVFAILGAVIGVANFDPVKR
        IAAGG VV AILGAVIGV+NFDPVKR
Subjt:  IAAGGVVVFAILGAVIGVANFDPVKR

XP_022987287.1 uncharacterized protein LOC111484883 [Cucurbita maxima]3.0e-4182.54Show/hide
Query:  MASTSALSMALPLTHATHRRLSNDAFFNPLP------LRKAIAAAAPTSNGRLVVVRSSLKEKAVTGLTAAALTAAMVIPEVAEAAGPGVSPSLKNFLLS
        MASTS +S+ALPLT ATH+RLSN AFFNPLP       RKAI AAAPTSNGRLV VRSSLKEKA+TG++AAALTA+MVIPEVAEAAGPGVSPSLKNFLLS
Subjt:  MASTSALSMALPLTHATHRRLSNDAFFNPLP------LRKAIAAAAPTSNGRLVVVRSSLKEKAVTGLTAAALTAAMVIPEVAEAAGPGVSPSLKNFLLS

Query:  IAAGGVVVFAILGAVIGVANFDPVKR
        IAAGG VV AILGAVIGV+NFDPVKR
Subjt:  IAAGGVVVFAILGAVIGVANFDPVKR

XP_038878912.1 uncharacterized protein LOC120071001 [Benincasa hispida]2.4e-4387.1Show/hide
Query:  MASTSALSMALPLTHATHRRLSNDAFFNPLP---LRKAIAAAAPTSNGRLVVVRSSLKEKAVTGLTAAALTAAMVIPEVAEAAGPGVSPSLKNFLLSIAA
        MASTSALSMALPLT+ATH+ LSNDAFFNPLP    RKAI AAAP SNGR+V VRSSLKEKAV G+TAAALTA+MVIPEVAEAAGPGVSPSLKNFLLSIAA
Subjt:  MASTSALSMALPLTHATHRRLSNDAFFNPLP---LRKAIAAAAPTSNGRLVVVRSSLKEKAVTGLTAAALTAAMVIPEVAEAAGPGVSPSLKNFLLSIAA

Query:  GGVVVFAILGAVIGVANFDPVKRS
        GG VV AILGAVIGVANFDPVKRS
Subjt:  GGVVVFAILGAVIGVANFDPVKRS

TrEMBL top hitse value%identityAlignment
A0A0A0LWL3 Uncharacterized protein3.6e-4082.26Show/hide
Query:  MASTSALSMALPLTHATHRRLSNDAFFNPLP---LRKAIAAAAPTSNGRLVVVRSSLKEKAVTGLTAAALTAAMVIPEVAEAAGPGVSPSLKNFLLSIAA
        MASTSALSMALP THAT + LSNDAFFNPLP    RK I A AP SNGR++ VRSS KEKAV G++AAALTA+MVIPEVAEAAG GVSPSLKNFLLSIAA
Subjt:  MASTSALSMALPLTHATHRRLSNDAFFNPLP---LRKAIAAAAPTSNGRLVVVRSSLKEKAVTGLTAAALTAAMVIPEVAEAAGPGVSPSLKNFLLSIAA

Query:  GGVVVFAILGAVIGVANFDPVKRS
        GGVVV AILGAVIGVANFDPVKRS
Subjt:  GGVVVFAILGAVIGVANFDPVKRS

A0A1S3BRD2 uncharacterized protein LOC1034923565.5e-4183.06Show/hide
Query:  MASTSALSMALPLTHATHRRLSNDAFFNPLP---LRKAIAAAAPTSNGRLVVVRSSLKEKAVTGLTAAALTAAMVIPEVAEAAGPGVSPSLKNFLLSIAA
        MASTSA+SMALP THATH+ LSNDAFFNPLP    RK I AAAP SNGR+V VRSSLKEKAV G+TAAAL A+MVIPEVAEAAG GVSPSLKNFLLSIAA
Subjt:  MASTSALSMALPLTHATHRRLSNDAFFNPLP---LRKAIAAAAPTSNGRLVVVRSSLKEKAVTGLTAAALTAAMVIPEVAEAAGPGVSPSLKNFLLSIAA

Query:  GGVVVFAILGAVIGVANFDPVKRS
        GG VV AI GAVIGVANFDPVKRS
Subjt:  GGVVVFAILGAVIGVANFDPVKRS

A0A6J1H8G2 uncharacterized protein LOC1114614522.9e-4283.33Show/hide
Query:  MASTSALSMALPLTHATHRRLSNDAFFNPLPL------RKAIAAAAPTSNGRLVVVRSSLKEKAVTGLTAAALTAAMVIPEVAEAAGPGVSPSLKNFLLS
        MASTS +S+ALPLT+ATH+RLSN AFFNPLP       RKAI AAAPTS+GRLV VRSSLKEKA+TGLTAAALTA+MVIPEVAEAAGPGVSPSLKNFLLS
Subjt:  MASTSALSMALPLTHATHRRLSNDAFFNPLPL------RKAIAAAAPTSNGRLVVVRSSLKEKAVTGLTAAALTAAMVIPEVAEAAGPGVSPSLKNFLLS

Query:  IAAGGVVVFAILGAVIGVANFDPVKR
        IAAGG VV AILGAVIGV+NFDPVKR
Subjt:  IAAGGVVVFAILGAVIGVANFDPVKR

A0A6J1HV97 uncharacterized protein LOC1114677552.0e-3882.79Show/hide
Query:  MASTSALSMALPLTHATHRRLSNDAFFNPLP--LRKAIAAAAPTSNGRLVVVRSSLKEKAVTGLTAAALTAAMVIPEVAEAAGPGVSPSLKNFLLSIAAG
        MAS  A+SMALPLT+A+ +RLSNDAFFNPLP   RKAI AA      RLVVV SSLKEKAVTGLTAAAL+AAMVIPEVAEAAGPGVSPSLKNFLLSIAAG
Subjt:  MASTSALSMALPLTHATHRRLSNDAFFNPLP--LRKAIAAAAPTSNGRLVVVRSSLKEKAVTGLTAAALTAAMVIPEVAEAAGPGVSPSLKNFLLSIAAG

Query:  GVVVFAILGAVIGVANFDPVKR
        GVVV AILGAVIGV+NFDPVKR
Subjt:  GVVVFAILGAVIGVANFDPVKR

A0A6J1J9Y5 uncharacterized protein LOC1114848831.4e-4182.54Show/hide
Query:  MASTSALSMALPLTHATHRRLSNDAFFNPLP------LRKAIAAAAPTSNGRLVVVRSSLKEKAVTGLTAAALTAAMVIPEVAEAAGPGVSPSLKNFLLS
        MASTS +S+ALPLT ATH+RLSN AFFNPLP       RKAI AAAPTSNGRLV VRSSLKEKA+TG++AAALTA+MVIPEVAEAAGPGVSPSLKNFLLS
Subjt:  MASTSALSMALPLTHATHRRLSNDAFFNPLP------LRKAIAAAAPTSNGRLVVVRSSLKEKAVTGLTAAALTAAMVIPEVAEAAGPGVSPSLKNFLLS

Query:  IAAGGVVVFAILGAVIGVANFDPVKR
        IAAGG VV AILGAVIGV+NFDPVKR
Subjt:  IAAGGVVVFAILGAVIGVANFDPVKR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G06520.1 photosystem II subunit X3.8e-2653.72Show/hide
Query:  MASTSALSMALPLTHATHRRLSNDAFFNPLPLRKAIAAAAPTSNGRLVVVRSSLKEKAVTGLTAAALTAAMVIPEVAEAAGPGVSPSLKNFLLSIAAGGV
        MASTSA+S+  PL      +  +  F  PLPL+ + A  A     + + V++   +KA+TG++AAALTA+MVIPE+AEAAG G+SPSLKNFLLSIA+GG+
Subjt:  MASTSALSMALPLTHATHRRLSNDAFFNPLPLRKAIAAAAPTSNGRLVVVRSSLKEKAVTGLTAAALTAAMVIPEVAEAAGPGVSPSLKNFLLSIAAGGV

Query:  VVFAILGAVIGVANFDPVKRS
        V+  I+G V+GV+NFDPVKR+
Subjt:  VVFAILGAVIGVANFDPVKRS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCACTTCTGCACTTTCAATGGCCCTGCCGTTGACCCACGCCACCCACAGGCGACTCTCCAACGACGCCTTCTTCAATCCTTTGCCTCTTCGCAAGGCGATCGC
CGCCGCCGCTCCCACATCCAACGGAAGGCTCGTCGTCGTCCGCTCCTCGTTGAAGGAGAAGGCCGTCACTGGACTCACCGCCGCCGCGCTCACGGCGGCGATGGTGATCC
CGGAGGTTGCAGAGGCTGCCGGTCCTGGAGTGTCGCCGTCGCTGAAGAACTTCTTGCTCAGCATTGCCGCCGGTGGAGTTGTGGTGTTCGCCATATTGGGAGCCGTCATC
GGCGTCGCTAACTTCGATCCGGTCAAGCGTAGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCACTTCTGCACTTTCAATGGCCCTGCCGTTGACCCACGCCACCCACAGGCGACTCTCCAACGACGCCTTCTTCAATCCTTTGCCTCTTCGCAAGGCGATCGC
CGCCGCCGCTCCCACATCCAACGGAAGGCTCGTCGTCGTCCGCTCCTCGTTGAAGGAGAAGGCCGTCACTGGACTCACCGCCGCCGCGCTCACGGCGGCGATGGTGATCC
CGGAGGTTGCAGAGGCTGCCGGTCCTGGAGTGTCGCCGTCGCTGAAGAACTTCTTGCTCAGCATTGCCGCCGGTGGAGTTGTGGTGTTCGCCATATTGGGAGCCGTCATC
GGCGTCGCTAACTTCGATCCGGTCAAGCGTAGCTGA
Protein sequenceShow/hide protein sequence
MASTSALSMALPLTHATHRRLSNDAFFNPLPLRKAIAAAAPTSNGRLVVVRSSLKEKAVTGLTAAALTAAMVIPEVAEAAGPGVSPSLKNFLLSIAAGGVVVFAILGAVI
GVANFDPVKRS