; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0034598 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0034598
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionDNA-directed RNA polymerase III subunit rpc4
Genome locationchr3:8770288..8773006
RNA-Seq ExpressionLag0034598
SyntenyLag0034598
Gene Ontology termsGO:0006383 - transcription by RNA polymerase III (biological process)
GO:0005666 - RNA polymerase III complex (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
InterPro domainsIPR007811 - DNA-directed RNA polymerase III subunit RPC4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147557.1 DNA-directed RNA polymerase III subunit rpc4 [Momordica charantia]4.0e-14087.37Show/hide
Query:  MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEITEDADAAQARDLLKRFNESTLRTKQKIGKKAAPTQVAFGSGGTSSTLRSYGFPKAGNRPRNEDG
        MEQDPPKNNT AQRKMKFAPKAPPRR+PKPEVKAEITE+ADAAQA+DLLKRFNEST+R KQK+GKKAAPTQVAFGSGGTS+T+RSYG PKAGNRPRNEDG
Subjt:  MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEITEDADAAQARDLLKRFNESTLRTKQKIGKKAAPTQVAFGSGGTSSTLRSYGFPKAGNRPRNEDG

Query:  TLPSSTSKEYVEPWDYYSYYPITLPLRRPYSGNPDFLNEEEFGEDSEARTYDENTTTPAMDLGLLEDNSETNIFFLQLPTMVPVTKQSSTVESMDASNSI
        TLPSS SKEYVEPWDYYSYYP+TLPLRRPYSG+PD LNEEEFGE SE RTYDE+ TTPAMDLGLLE+N ETN+FFLQ+P MVPVTKQSSTVE M A++S 
Subjt:  TLPSSTSKEYVEPWDYYSYYPITLPLRRPYSGNPDFLNEEEFGEDSEARTYDENTTTPAMDLGLLEDNSETNIFFLQLPTMVPVTKQSSTVESMDASNSI

Query:  EQRKGSQPQQKTSSLNELPSGSMGKLLVYRSGAVKLKLGDIVYDVSTGMDCGFAQDVAAINVEGKHCCIVGELSKRAILTPDVDSMLKNIEDL
        EQ KGS+ +Q   SLNELPSGSMGKLLVYRSGAVKLKLGDIVYDVS+GMDCGFAQDVAAINVEGKHCCIVGELSKRAILTPDVDSMLK+IEDL
Subjt:  EQRKGSQPQQKTSSLNELPSGSMGKLLVYRSGAVKLKLGDIVYDVSTGMDCGFAQDVAAINVEGKHCCIVGELSKRAILTPDVDSMLKNIEDL

XP_022933797.1 DNA-directed RNA polymerase III subunit RPC4-like [Cucurbita moschata]2.5e-13485.67Show/hide
Query:  MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEITEDADAAQARDLLKRFNESTLRTKQKIGKKAAPTQVAFGSGGTSSTLRSYGFPKAGNRPRNEDG
        MEQDP KNN AAQRKMKFAPKAPPRRIPK EVKAE++E ADAAQARDLLKRFNE+T R KQK+GKKAAPTQVAFG+GGTSS+LR+YG  KAGN+ RNEDG
Subjt:  MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEITEDADAAQARDLLKRFNESTLRTKQKIGKKAAPTQVAFGSGGTSSTLRSYGFPKAGNRPRNEDG

Query:  TLPSSTSKEYVEPWDYYSYYPITLPLRRPYSGNPDFLNEEEFGEDSEARTYDENTTTPAMDLGLLEDNSETNIFFLQLPTMVPVTKQSSTVESMDASNSI
        TLPS  SKEYVEPWDYYSYYP+TLPLRRPYSGNPD LNE EFGE SEARTYDENTTTPAMDLGLLEDN ETNIFFLQLP MVPVT+QSST E M+A+NS+
Subjt:  TLPSSTSKEYVEPWDYYSYYPITLPLRRPYSGNPDFLNEEEFGEDSEARTYDENTTTPAMDLGLLEDNSETNIFFLQLPTMVPVTKQSSTVESMDASNSI

Query:  EQRKGSQPQQKTSSLNELPSGSMGKLLVYRSGAVKLKLGDIVYDVSTGMDCGFAQDVAAINVEGKHCCIVGELSKRAILTPDVDSMLKNIEDL
        EQ K SQP QKT SLNE PSGSMGKLLVYRSGAVKLKLG+IVYDVS+GMDCGFAQ++AAINVEGK CCIVGELSKRA+LTPDVDSMLKNIEDL
Subjt:  EQRKGSQPQQKTSSLNELPSGSMGKLLVYRSGAVKLKLGDIVYDVSTGMDCGFAQDVAAINVEGKHCCIVGELSKRAILTPDVDSMLKNIEDL

XP_022968121.1 uncharacterized protein LOC111467450 [Cucurbita maxima]2.5e-13484.98Show/hide
Query:  MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEITEDADAAQARDLLKRFNESTLRTKQKIGKKAAPTQVAFGSGGTSSTLRSYGFPKAGNRPRNEDG
        MEQDP KNN AAQRKMKFAPKAPPRRIPK EVKAE++E ADAAQARDLLKRFNE+T R KQK+GKKAAPTQVAFG+GGTSS+LR++GF KAGN+ RNEDG
Subjt:  MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEITEDADAAQARDLLKRFNESTLRTKQKIGKKAAPTQVAFGSGGTSSTLRSYGFPKAGNRPRNEDG

Query:  TLPSSTSKEYVEPWDYYSYYPITLPLRRPYSGNPDFLNEEEFGEDSEARTYDENTTTPAMDLGLLEDNSETNIFFLQLPTMVPVTKQSSTVESMDASNSI
        TLP   S+EYVEPWDYYSYYP+TLPLRRPYSGNPD LNE EFGE SE+RTYDENTTTPAMDLGLLEDN ETNIFFLQLP MVPVT+QSST E M+A+NS+
Subjt:  TLPSSTSKEYVEPWDYYSYYPITLPLRRPYSGNPDFLNEEEFGEDSEARTYDENTTTPAMDLGLLEDNSETNIFFLQLPTMVPVTKQSSTVESMDASNSI

Query:  EQRKGSQPQQKTSSLNELPSGSMGKLLVYRSGAVKLKLGDIVYDVSTGMDCGFAQDVAAINVEGKHCCIVGELSKRAILTPDVDSMLKNIEDL
        EQ K SQP QKT SLNE PSGSMGKLLVYRSGAVKLKLGDIVYDVS+GMDCGFAQ++AAINVEGK CCIVGELSKRA+LTPDVDSMLKNIEDL
Subjt:  EQRKGSQPQQKTSSLNELPSGSMGKLLVYRSGAVKLKLGDIVYDVSTGMDCGFAQDVAAINVEGKHCCIVGELSKRAILTPDVDSMLKNIEDL

XP_023529312.1 uncharacterized protein LOC111792200 [Cucurbita pepo subsp. pepo]2.4e-13785.67Show/hide
Query:  MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEITEDADAAQARDLLKRFNESTLRTKQKIGKKAAPTQVAFGSGGTSSTLRSYGFPKAGNRPRNEDG
        MEQDP KNN AAQRKMKFAPKAPPRRIPK EVKAE++E ADAAQARDLLKRFNE+T R KQK+GKKAAPTQVAFG+GGTSS+LR+YGF KAGN+ +NEDG
Subjt:  MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEITEDADAAQARDLLKRFNESTLRTKQKIGKKAAPTQVAFGSGGTSSTLRSYGFPKAGNRPRNEDG

Query:  TLPSSTSKEYVEPWDYYSYYPITLPLRRPYSGNPDFLNEEEFGEDSEARTYDENTTTPAMDLGLLEDNSETNIFFLQLPTMVPVTKQSSTVESMDASNSI
        TLPSST KEYVEPWDYYSYYP+TLPLRRPYSGNPD LNE EFGE SE+RTYDENTTTPAMDLGLLEDN ETNIFFLQLP MVPVT+QSST E M+A+NS+
Subjt:  TLPSSTSKEYVEPWDYYSYYPITLPLRRPYSGNPDFLNEEEFGEDSEARTYDENTTTPAMDLGLLEDNSETNIFFLQLPTMVPVTKQSSTVESMDASNSI

Query:  EQRKGSQPQQKTSSLNELPSGSMGKLLVYRSGAVKLKLGDIVYDVSTGMDCGFAQDVAAINVEGKHCCIVGELSKRAILTPDVDSMLKNIEDL
        EQ KGSQP QKT +LNE PSGSMGKLLVYRSGAVKLKLG+IVYDVS+GMDCGFAQ++AAINVEGK CCIVGELSKRA+LTPDVDSMLKNIEDL
Subjt:  EQRKGSQPQQKTSSLNELPSGSMGKLLVYRSGAVKLKLGDIVYDVSTGMDCGFAQDVAAINVEGKHCCIVGELSKRAILTPDVDSMLKNIEDL

XP_038878504.1 uncharacterized protein LOC120070724 [Benincasa hispida]6.4e-13887.03Show/hide
Query:  MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEITEDADAAQARDLLKRFNESTLRTKQKIGKKAAPTQVAFGSGGTSSTLRSYGFPKAGNRPRNEDG
        MEQDPPKN TAA RK+KFAPKAP RRIPKPEVKAEI EDADAAQARDLLKRFNESTLRTKQKIG+KAAPTQVAFGSGGTSSTLRSYG  KAGNRPRNEDG
Subjt:  MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEITEDADAAQARDLLKRFNESTLRTKQKIGKKAAPTQVAFGSGGTSSTLRSYGFPKAGNRPRNEDG

Query:  TLPSSTSKEYVEPWDYYSYYPITLPLRRPYSGNPDFLNEEEFGEDSEARTYDENTTTPAMDLGLLEDNSETNIFFLQLPTMVPVTKQSSTVESMDASNSI
        TLPSSTSKEYVEPWDYYSYYP+TLPLRRPYSGNPD LNEEEFGE SE   YDENTTTPAMDLGLLE+N E ++FFLQLP MVP+ KQSSTVE   A+NS+
Subjt:  TLPSSTSKEYVEPWDYYSYYPITLPLRRPYSGNPDFLNEEEFGEDSEARTYDENTTTPAMDLGLLEDNSETNIFFLQLPTMVPVTKQSSTVESMDASNSI

Query:  EQRKGSQPQQKTSSLNELPSGSMGKLLVYRSGAVKLKLGDIVYDVSTGMDCGFAQDVAAINVEGKHCCIVGELSKRAILTPDVDSMLKNIEDL
        EQ KGSQP+QK   +NELPSGSMGKLLVYRSGAVKLKLGDI+YDVS+GMDCGFAQDVAA+NVEGK CCIVGELSKRAILTPDVDS+LKNIEDL
Subjt:  EQRKGSQPQQKTSSLNELPSGSMGKLLVYRSGAVKLKLGDIVYDVSTGMDCGFAQDVAAINVEGKHCCIVGELSKRAILTPDVDSMLKNIEDL

TrEMBL top hitse value%identityAlignment
A0A0A0LWX7 Uncharacterized protein1.3e-13383.62Show/hide
Query:  MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEITEDADAAQARDLLKRFNESTLRTKQKIGKKAAPTQVAFGSGGTSSTLRSYGFPKAGNRPRNEDG
        MEQ+PPKN TAA RK+KFAPKAP RRIPKPEVKAE+ EDADAAQARDLLKRFNEST R KQ++G+KAAPTQVAFGSGG+SSTLRSYG  KAGNRPRNEDG
Subjt:  MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEITEDADAAQARDLLKRFNESTLRTKQKIGKKAAPTQVAFGSGGTSSTLRSYGFPKAGNRPRNEDG

Query:  TLPSSTSKEYVEPWDYYSYYPITLPLRRPYSGNPDFLNEEEFGEDSEARTYDENTTTPAMDLGLLEDNSETNIFFLQLPTMVPVTKQSSTVESMDASNSI
        TLP+STSKEYVEPWDYYSYYP+TLPLRRPYSGNPD LNEEEFGE SE  TYDENTTT AM+LGLLE+N E ++ FLQLP MVP+ KQSS+VE M + NS 
Subjt:  TLPSSTSKEYVEPWDYYSYYPITLPLRRPYSGNPDFLNEEEFGEDSEARTYDENTTTPAMDLGLLEDNSETNIFFLQLPTMVPVTKQSSTVESMDASNSI

Query:  EQRKGSQPQQKTSSLNELPSGSMGKLLVYRSGAVKLKLGDIVYDVSTGMDCGFAQDVAAINVEGKHCCIVGELSKRAILTPDVDSMLKNIEDL
        EQ K SQP+QKT S+NELPSGS+GKLLVYRSGAVKLKLGDI+YDVS+GMDCGFAQ+VAAINVEGK CCIVGELSKRAILTPDVDSMLKNIEDL
Subjt:  EQRKGSQPQQKTSSLNELPSGSMGKLLVYRSGAVKLKLGDIVYDVSTGMDCGFAQDVAAINVEGKHCCIVGELSKRAILTPDVDSMLKNIEDL

A0A1S3BPR1 DNA-directed RNA polymerase III subunit RPC41.1e-13282.94Show/hide
Query:  MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEITEDADAAQARDLLKRFNESTLRTKQKIGKKAAPTQVAFGSGGTSSTLRSYGFPKAGNRPRNEDG
        MEQDPPKN TA  RK+KFAPKAP RR+PKPEVKAE+ ED DAAQARDLLKRFNEST R KQ++G+KAAPTQVAFGSGG+SSTLRSYG  KAGNRPRNEDG
Subjt:  MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEITEDADAAQARDLLKRFNESTLRTKQKIGKKAAPTQVAFGSGGTSSTLRSYGFPKAGNRPRNEDG

Query:  TLPSSTSKEYVEPWDYYSYYPITLPLRRPYSGNPDFLNEEEFGEDSEARTYDENTTTPAMDLGLLEDNSETNIFFLQLPTMVPVTKQSSTVESMDASNSI
        TLP+STSKEYVEPWDYYSYYP+TLPLRRPYSGNPD LNEEEFGE SE  TYDENTTT AM+LGLLE+N ET++FFLQLP MVP+ KQSSTVE+M + N  
Subjt:  TLPSSTSKEYVEPWDYYSYYPITLPLRRPYSGNPDFLNEEEFGEDSEARTYDENTTTPAMDLGLLEDNSETNIFFLQLPTMVPVTKQSSTVESMDASNSI

Query:  EQRKGSQPQQKTSSLNELPSGSMGKLLVYRSGAVKLKLGDIVYDVSTGMDCGFAQDVAAINVEGKHCCIVGELSKRAILTPDVDSMLKNIEDL
        EQ   SQ +QKT S+NELPSGSMGKLLVYRSGAVKLKLGDI+YDVS+GMDCGFAQ+VAAIN+EGKHCCIVGELSKRAILTPDVDSML+NIEDL
Subjt:  EQRKGSQPQQKTSSLNELPSGSMGKLLVYRSGAVKLKLGDIVYDVSTGMDCGFAQDVAAINVEGKHCCIVGELSKRAILTPDVDSMLKNIEDL

A0A6J1D2P1 DNA-directed RNA polymerase III subunit rpc41.9e-14087.37Show/hide
Query:  MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEITEDADAAQARDLLKRFNESTLRTKQKIGKKAAPTQVAFGSGGTSSTLRSYGFPKAGNRPRNEDG
        MEQDPPKNNT AQRKMKFAPKAPPRR+PKPEVKAEITE+ADAAQA+DLLKRFNEST+R KQK+GKKAAPTQVAFGSGGTS+T+RSYG PKAGNRPRNEDG
Subjt:  MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEITEDADAAQARDLLKRFNESTLRTKQKIGKKAAPTQVAFGSGGTSSTLRSYGFPKAGNRPRNEDG

Query:  TLPSSTSKEYVEPWDYYSYYPITLPLRRPYSGNPDFLNEEEFGEDSEARTYDENTTTPAMDLGLLEDNSETNIFFLQLPTMVPVTKQSSTVESMDASNSI
        TLPSS SKEYVEPWDYYSYYP+TLPLRRPYSG+PD LNEEEFGE SE RTYDE+ TTPAMDLGLLE+N ETN+FFLQ+P MVPVTKQSSTVE M A++S 
Subjt:  TLPSSTSKEYVEPWDYYSYYPITLPLRRPYSGNPDFLNEEEFGEDSEARTYDENTTTPAMDLGLLEDNSETNIFFLQLPTMVPVTKQSSTVESMDASNSI

Query:  EQRKGSQPQQKTSSLNELPSGSMGKLLVYRSGAVKLKLGDIVYDVSTGMDCGFAQDVAAINVEGKHCCIVGELSKRAILTPDVDSMLKNIEDL
        EQ KGS+ +Q   SLNELPSGSMGKLLVYRSGAVKLKLGDIVYDVS+GMDCGFAQDVAAINVEGKHCCIVGELSKRAILTPDVDSMLK+IEDL
Subjt:  EQRKGSQPQQKTSSLNELPSGSMGKLLVYRSGAVKLKLGDIVYDVSTGMDCGFAQDVAAINVEGKHCCIVGELSKRAILTPDVDSMLKNIEDL

A0A6J1F0U0 DNA-directed RNA polymerase III subunit RPC4-like1.2e-13485.67Show/hide
Query:  MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEITEDADAAQARDLLKRFNESTLRTKQKIGKKAAPTQVAFGSGGTSSTLRSYGFPKAGNRPRNEDG
        MEQDP KNN AAQRKMKFAPKAPPRRIPK EVKAE++E ADAAQARDLLKRFNE+T R KQK+GKKAAPTQVAFG+GGTSS+LR+YG  KAGN+ RNEDG
Subjt:  MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEITEDADAAQARDLLKRFNESTLRTKQKIGKKAAPTQVAFGSGGTSSTLRSYGFPKAGNRPRNEDG

Query:  TLPSSTSKEYVEPWDYYSYYPITLPLRRPYSGNPDFLNEEEFGEDSEARTYDENTTTPAMDLGLLEDNSETNIFFLQLPTMVPVTKQSSTVESMDASNSI
        TLPS  SKEYVEPWDYYSYYP+TLPLRRPYSGNPD LNE EFGE SEARTYDENTTTPAMDLGLLEDN ETNIFFLQLP MVPVT+QSST E M+A+NS+
Subjt:  TLPSSTSKEYVEPWDYYSYYPITLPLRRPYSGNPDFLNEEEFGEDSEARTYDENTTTPAMDLGLLEDNSETNIFFLQLPTMVPVTKQSSTVESMDASNSI

Query:  EQRKGSQPQQKTSSLNELPSGSMGKLLVYRSGAVKLKLGDIVYDVSTGMDCGFAQDVAAINVEGKHCCIVGELSKRAILTPDVDSMLKNIEDL
        EQ K SQP QKT SLNE PSGSMGKLLVYRSGAVKLKLG+IVYDVS+GMDCGFAQ++AAINVEGK CCIVGELSKRA+LTPDVDSMLKNIEDL
Subjt:  EQRKGSQPQQKTSSLNELPSGSMGKLLVYRSGAVKLKLGDIVYDVSTGMDCGFAQDVAAINVEGKHCCIVGELSKRAILTPDVDSMLKNIEDL

A0A6J1HTZ8 uncharacterized protein LOC1114674501.2e-13484.98Show/hide
Query:  MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEITEDADAAQARDLLKRFNESTLRTKQKIGKKAAPTQVAFGSGGTSSTLRSYGFPKAGNRPRNEDG
        MEQDP KNN AAQRKMKFAPKAPPRRIPK EVKAE++E ADAAQARDLLKRFNE+T R KQK+GKKAAPTQVAFG+GGTSS+LR++GF KAGN+ RNEDG
Subjt:  MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEITEDADAAQARDLLKRFNESTLRTKQKIGKKAAPTQVAFGSGGTSSTLRSYGFPKAGNRPRNEDG

Query:  TLPSSTSKEYVEPWDYYSYYPITLPLRRPYSGNPDFLNEEEFGEDSEARTYDENTTTPAMDLGLLEDNSETNIFFLQLPTMVPVTKQSSTVESMDASNSI
        TLP   S+EYVEPWDYYSYYP+TLPLRRPYSGNPD LNE EFGE SE+RTYDENTTTPAMDLGLLEDN ETNIFFLQLP MVPVT+QSST E M+A+NS+
Subjt:  TLPSSTSKEYVEPWDYYSYYPITLPLRRPYSGNPDFLNEEEFGEDSEARTYDENTTTPAMDLGLLEDNSETNIFFLQLPTMVPVTKQSSTVESMDASNSI

Query:  EQRKGSQPQQKTSSLNELPSGSMGKLLVYRSGAVKLKLGDIVYDVSTGMDCGFAQDVAAINVEGKHCCIVGELSKRAILTPDVDSMLKNIEDL
        EQ K SQP QKT SLNE PSGSMGKLLVYRSGAVKLKLGDIVYDVS+GMDCGFAQ++AAINVEGK CCIVGELSKRA+LTPDVDSMLKNIEDL
Subjt:  EQRKGSQPQQKTSSLNELPSGSMGKLLVYRSGAVKLKLGDIVYDVSTGMDCGFAQDVAAINVEGKHCCIVGELSKRAILTPDVDSMLKNIEDL

SwissProt top hitse value%identityAlignment
O74857 DNA-directed RNA polymerase III subunit rpc41.7e-0522.29Show/hide
Query:  EDSEARTYDENTTTPAMDLGL-----LEDNSETNIFFLQLPTMVPVTKQSSTVESMDASNSIEQRKGSQPQ------------QKTSSLNEL--------
        ED E      +  + A  LGL     +ED+ +  +  +Q P  +P     + V+ +  S+ +++ +  +              ++  ++++L        
Subjt:  EDSEARTYDENTTTPAMDLGL-----LEDNSETNIFFLQLPTMVPVTKQSSTVESMDASNSIEQRKGSQPQ------------QKTSSLNEL--------

Query:  --PSGSMGKLLVYRSGAVKLKLGDIVYDVSTGMDCGFAQDVAAINVEGKHCCIVGELSKRAILTPD
          P+G +G L V++SG   L++G + + V +G DC F Q++A ++ + K    +G   +R I++PD
Subjt:  --PSGSMGKLLVYRSGAVKLKLGDIVYDVSTGMDCGFAQDVAAINVEGKHCCIVGELSKRAILTPD

P05423 DNA-directed RNA polymerase III subunit RPC42.7e-0625.95Show/hide
Query:  ETNIFFLQLPTMVPVTKQSSTVESMDASNS--------IEQRKGSQPQ--QKTSSLNELPSGSMGKLLVYRSGAVKLKLGDIVYDVSTGMDCGFAQDVAA
        E  + FLQLP  +P    +  ++ +             I+Q K  + +  +   +L +L  G +GKLL+ +SG V+L LG +  DV+ G  C F Q++ +
Subjt:  ETNIFFLQLPTMVPVTKQSSTVESMDASNS--------IEQRKGSQPQ--QKTSSLNELPSGSMGKLLVYRSGAVKLKLGDIVYDVSTGMDCGFAQDVAA

Query:  INVEGK---HCCIVGELSKRAILTPDVDSML
        + +         ++G +  + + +PD +S+L
Subjt:  INVEGK---HCCIVGELSKRAILTPDVDSML

P25441 DNA-directed RNA polymerase III subunit RPC46.6e-0524.6Show/hide
Query:  DNSETNIFFLQLPTMVPVTKQSSTVESMD-----ASNSIEQRKGSQPQQKTSSLN--ELPSGSMGKLLVYRSGAVKLKLGDIVYDVSTGMDCGFAQDVAA
        +N        QLPT +P  ++ +  E  +     AS+  +++K  + +    +L+  EL +G +G + V++SG + +K+G++V D+  G +  F QDV A
Subjt:  DNSETNIFFLQLPTMVPVTKQSSTVESMD-----ASNSIEQRKGSQPQQKTSSLN--ELPSGSMGKLLVYRSGAVKLKLGDIVYDVSTGMDCGFAQDVAA

Query:  INV--EGKHCCIVGELSKRAILTPDV
        +++  +     ++G +  + ++TP +
Subjt:  INV--EGKHCCIVGELSKRAILTPDV

Q5E9Z7 DNA-directed RNA polymerase III subunit RPC45.4e-0726.72Show/hide
Query:  ETNIFFLQLPTMVP-------VTKQSSTVESMDASNSI---EQRKGSQPQQKTSSLNELPSGSMGKLLVYRSGAVKLKLGDIVYDVSTGMDCGFAQDVAA
        E  + FLQLP  +P       +    + V+S D    +   E+ + ++  + T +L +L  G +GKLL+ +SG V+L LG +  DV+ G  C F Q++ +
Subjt:  ETNIFFLQLPTMVP-------VTKQSSTVESMDASNSI---EQRKGSQPQQKTSSLNELPSGSMGKLLVYRSGAVKLKLGDIVYDVSTGMDCGFAQDVAA

Query:  INVEGKH---CCIVGELSKRAILTPDVDSML
        + +         ++G +  + + +P+ +S+L
Subjt:  INVEGKH---CCIVGELSKRAILTPDVDSML

Q91WD1 DNA-directed RNA polymerase III subunit RPC41.2e-0625.71Show/hide
Query:  DLGLLEDNSETNIFFLQLPTMVP-------VTKQSSTVESMDASNSI---EQRKGSQPQQKTSSLNELPSGSMGKLLVYRSGAVKLKLGDIVYDVSTGMD
        +L L++D     + FLQLP  +P       +    + V+  D    +   E+ + ++  +   +L +L  G +GKLL+ +SG V+L LG +  DV+ G  
Subjt:  DLGLLEDNSETNIFFLQLPTMVP-------VTKQSSTVESMDASNSI---EQRKGSQPQQKTSSLNELPSGSMGKLLVYRSGAVKLKLGDIVYDVSTGMD

Query:  CGFAQDVAAINVEGK---HCCIVGELSKRAILTPDVDSML
        C F Q++ ++ +         ++G +  + + +PD +S+L
Subjt:  CGFAQDVAAINVEGK---HCCIVGELSKRAILTPDVDSML

Arabidopsis top hitse value%identityAlignment
AT4G25180.1 RNA polymerase III RPC41.9e-3934.52Show/hide
Query:  AQRKMKFAPKAPPRRIP-KPEVKAEITEDADAAQARDLLKRFNESTLRTKQKIGKKAAPTQVAFGSGGTSSTLRSYGFPKAGNRPRN-------------
        ++R+ +  P  P RR+P  P    E  ED +  +A    ++F+   +  + K   KA+  +VAF    +   +RS+G PK  ++P +             
Subjt:  AQRKMKFAPKAPPRRIP-KPEVKAEITEDADAAQARDLLKRFNESTLRTKQKIGKKAAPTQVAFGSGGTSSTLRSYGFPKAGNRPRN-------------

Query:  --------EDG----TLPSSTSKEYVEPWDY-YSYYPITLPLRRPYSGNPDFLNEEEFGEDSEARTYDENTTTPAMDLGLLE-DNSETNIFFLQLPTMVP
                EDG       + T  +YVEPWDY  SYYP  LPLR+P SG+ + L++EEFGE ++ R YDENT   A +LGL    +S+  +F  ++P  +P
Subjt:  --------EDG----TLPSSTSKEYVEPWDY-YSYYPITLPLRRPYSGNPDFLNEEEFGEDSEARTYDENTTTPAMDLGLLE-DNSETNIFFLQLPTMVP

Query:  VTKQSSTVESMDASNSIEQRKGSQPQQKTSSLNELPSGSMGKLLVYRSGAVKLKLGDIVYDVSTGMDCGFAQDVAAINVEGKHCCIVGELSKRAILTPDV
        V KQ++         S+ +         ++    LP G MGK+LVY+SGAVKLK+GD ++DVS G       DV AI+++G++C  +G  +K   +TPDV
Subjt:  VTKQSSTVESMDASNSIEQRKGSQPQQKTSSLNELPSGSMGKLLVYRSGAVKLKLGDIVYDVSTGMDCGFAQDVAAINVEGKHCCIVGELSKRAILTPDV

Query:  DSMLKNIEDL
        +S+L    D+
Subjt:  DSMLKNIEDL

AT5G09380.1 RNA polymerase III RPC44.5e-6549.32Show/hide
Query:  MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEITED-ADAAQARDLLKRFNESTLRTKQKIGKKAAPTQVAFGSGGTSSTLRSYGFPKAGNRPRNED
        MEQ PP       RKMKFAPKAPP+R+PKPEVK E+ ED +++AQA +LL+R NE +LR K K  KK   +QVA+  G  +ST  +    K  NR     
Subjt:  MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEITED-ADAAQARDLLKRFNESTLRTKQKIGKKAAPTQVAFGSGGTSSTLRSYGFPKAGNRPRNED

Query:  GTLPSSTSKEYVEPWDYYSYYPITLPLRRPYSGNPDFLNEEEFGEDSEARTYDENTTTPAMDLGLLEDNSETNIFFLQLPTMVPVTKQSSTVESMDASNS
        G+  S+   EY EPWDYYSYYPITLP+RRPY+G+P+ L+ EEF    +A  + E++   A +LGL+ED+ E  +FF++LP+ VP+   S+  E+++   +
Subjt:  GTLPSSTSKEYVEPWDYYSYYPITLPLRRPYSGNPDFLNEEEFGEDSEARTYDENTTTPAMDLGLLEDNSETNIFFLQLPTMVPVTKQSSTVESMDASNS

Query:  IEQRKGSQPQQKTSSLNELPSGSMGKLLVYRSGAVKLKLGDIVYDVSTGMDCGFAQDVAAINVEGKHCCIVGELSKRAILTPDVDSMLKNIEDL
        I+       ++KT  L  LP G MGKLLVY+SGAVK+KLG+++YDVS G+   FAQDV  +N E K+CC+VG++ K A+LTPD+DS+LK+IE++
Subjt:  IEQRKGSQPQQKTSSLNELPSGSMGKLLVYRSGAVKLKLGDIVYDVSTGMDCGFAQDVAAINVEGKHCCIVGELSKRAILTPDVDSMLKNIEDL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCAAGATCCGCCCAAGAACAATACAGCTGCTCAAAGGAAGATGAAATTTGCCCCAAAAGCACCTCCTCGTCGTATACCGAAACCTGAAGTTAAAGCAGAAATAAC
AGAGGACGCTGATGCTGCTCAAGCCAGGGATTTACTAAAACGCTTTAATGAAAGTACCCTGAGGACAAAGCAAAAAATTGGGAAAAAAGCGGCACCTACACAAGTTGCAT
TTGGTTCTGGAGGTACATCAAGCACCCTAAGATCATATGGTTTTCCAAAAGCTGGAAATAGACCAAGAAATGAAGATGGAACTCTACCGTCTAGTACAAGCAAGGAGTAT
GTAGAACCATGGGATTATTACAGTTATTATCCTATAACTCTTCCTTTGCGGAGACCATATTCAGGAAATCCAGATTTTCTTAACGAGGAGGAATTTGGAGAGGATTCAGA
AGCCCGAACCTATGATGAAAATACAACAACTCCAGCAATGGATCTTGGTCTACTGGAGGATAATTCAGAAACAAACATCTTTTTTCTACAATTACCAACTATGGTGCCTG
TGACAAAGCAATCTTCTACTGTAGAAAGCATGGATGCATCCAACAGCATAGAACAACGTAAAGGTTCACAACCTCAACAGAAAACCAGCTCTCTGAATGAGTTACCTTCT
GGCTCCATGGGTAAATTGCTGGTGTATAGGAGTGGTGCTGTCAAGTTAAAACTCGGTGATATTGTTTATGATGTTTCTACTGGAATGGATTGTGGCTTTGCACAAGACGT
TGCAGCTATCAATGTGGAAGGGAAGCATTGCTGCATTGTTGGGGAGCTTAGCAAGCGTGCCATTTTAACGCCAGATGTGGACTCAATGTTAAAGAATATCGAGGATTTAT
GA
mRNA sequenceShow/hide mRNA sequence
ATGGAGCAAGATCCGCCCAAGAACAATACAGCTGCTCAAAGGAAGATGAAATTTGCCCCAAAAGCACCTCCTCGTCGTATACCGAAACCTGAAGTTAAAGCAGAAATAAC
AGAGGACGCTGATGCTGCTCAAGCCAGGGATTTACTAAAACGCTTTAATGAAAGTACCCTGAGGACAAAGCAAAAAATTGGGAAAAAAGCGGCACCTACACAAGTTGCAT
TTGGTTCTGGAGGTACATCAAGCACCCTAAGATCATATGGTTTTCCAAAAGCTGGAAATAGACCAAGAAATGAAGATGGAACTCTACCGTCTAGTACAAGCAAGGAGTAT
GTAGAACCATGGGATTATTACAGTTATTATCCTATAACTCTTCCTTTGCGGAGACCATATTCAGGAAATCCAGATTTTCTTAACGAGGAGGAATTTGGAGAGGATTCAGA
AGCCCGAACCTATGATGAAAATACAACAACTCCAGCAATGGATCTTGGTCTACTGGAGGATAATTCAGAAACAAACATCTTTTTTCTACAATTACCAACTATGGTGCCTG
TGACAAAGCAATCTTCTACTGTAGAAAGCATGGATGCATCCAACAGCATAGAACAACGTAAAGGTTCACAACCTCAACAGAAAACCAGCTCTCTGAATGAGTTACCTTCT
GGCTCCATGGGTAAATTGCTGGTGTATAGGAGTGGTGCTGTCAAGTTAAAACTCGGTGATATTGTTTATGATGTTTCTACTGGAATGGATTGTGGCTTTGCACAAGACGT
TGCAGCTATCAATGTGGAAGGGAAGCATTGCTGCATTGTTGGGGAGCTTAGCAAGCGTGCCATTTTAACGCCAGATGTGGACTCAATGTTAAAGAATATCGAGGATTTAT
GA
Protein sequenceShow/hide protein sequence
MEQDPPKNNTAAQRKMKFAPKAPPRRIPKPEVKAEITEDADAAQARDLLKRFNESTLRTKQKIGKKAAPTQVAFGSGGTSSTLRSYGFPKAGNRPRNEDGTLPSSTSKEY
VEPWDYYSYYPITLPLRRPYSGNPDFLNEEEFGEDSEARTYDENTTTPAMDLGLLEDNSETNIFFLQLPTMVPVTKQSSTVESMDASNSIEQRKGSQPQQKTSSLNELPS
GSMGKLLVYRSGAVKLKLGDIVYDVSTGMDCGFAQDVAAINVEGKHCCIVGELSKRAILTPDVDSMLKNIEDL