CuGenDBv2

Gene ID	Lag0034665
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Ribosomal protein
Genome location	chr3:9574340..9581370
RNA-Seq Expression	Lag0034665
Synteny	Lag0034665
Gene Ontology terms	GO:0000470 - maturation of LSU-rRNA (biological process) GO:0006412 - translation (biological process) GO:0022625 - cytosolic large ribosomal subunit (cellular component) GO:0003723 - RNA binding (molecular function) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR023674 - Ribosomal protein L1-like IPR028364 - Ribosomal protein L1/ribosomal biogenesis protein

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

TYI64797.1 hypothetical protein E1A91_D09G113500v1 [Gossypium mustelinum]

8.0e-29

86.25

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Query:  RIVGPGLNKADKFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGVVVGNVDMEEKQVFQNVQMSINFLVSLLKKSCQSI
        R++GPGLNKA KFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGV VGNV MEEKQ+FQNVQMS+NFLVSLLKK+ Q++
Subjt:  RIVGPGLNKADKFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGVVVGNVDMEEKQVFQNVQMSINFLVSLLKKSCQSI

XP_022142655.1 60S ribosomal protein L10a [Momordica charantia]

1.8e-28

86.25

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Query:  RIVGPGLNKADKFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGVVVGNVDMEEKQVFQNVQMSINFLVSLLKKSCQSI
        R++GPGLNKA KFPTLVTHQE LESKVNETKAMVKFQLKKVLCMGV VGNV MEEKQVFQNVQMS+NFLVSLLKK+ Q++
Subjt:  RIVGPGLNKADKFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGVVVGNVDMEEKQVFQNVQMSINFLVSLLKKSCQSI

XP_028773124.1 60S ribosomal protein L10a-1 [Prosopis alba]

2.3e-28

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Query:  RIVGPGLNKADKFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGVVVGNVDMEEKQVFQNVQMSINFLVSLLKKSCQSI
        R++GPGLNKA KFPTLVTHQE LESKVNETKAMVKFQLKKVLCMGV VGNV MEEKQ+FQNVQMS+NFLVSLLKK+ Q++
Subjt:  RIVGPGLNKADKFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGVVVGNVDMEEKQVFQNVQMSINFLVSLLKKSCQSI

XP_038998983.1 60S ribosomal protein L10a-like isoform X1 [Hibiscus syriacus]

8.0e-29

86.25

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Query:  RIVGPGLNKADKFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGVVVGNVDMEEKQVFQNVQMSINFLVSLLKKSCQSI
        R++GPGLNKA KFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGV VGNV MEEKQ+FQNVQMS+NFLVSLLKK+ Q++
Subjt:  RIVGPGLNKADKFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGVVVGNVDMEEKQVFQNVQMSINFLVSLLKKSCQSI

XP_038998985.1 60S ribosomal protein L10a-like isoform X2 [Hibiscus syriacus]

8.0e-29

86.25

Show/hide

Query:  RIVGPGLNKADKFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGVVVGNVDMEEKQVFQNVQMSINFLVSLLKKSCQSI
        R++GPGLNKA KFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGV VGNV MEEKQ+FQNVQMS+NFLVSLLKK+ Q++
Subjt:  RIVGPGLNKADKFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGVVVGNVDMEEKQVFQNVQMSINFLVSLLKKSCQSI

TrEMBL top hits

e value

%identity

Alignment

A0A1U8PI61 Ribosomal protein

1.5e-28

86.25

Show/hide

Query:  RIVGPGLNKADKFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGVVVGNVDMEEKQVFQNVQMSINFLVSLLKKSCQSI
        R++GPGLNKA KFPTLVTHQE LESKVNETKAMVKFQLKKVLCMGV VGNV MEEKQVFQNVQMS+NFLVSLLKK+ Q++
Subjt:  RIVGPGLNKADKFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGVVVGNVDMEEKQVFQNVQMSINFLVSLLKKSCQSI

A0A5D2TI51 Ribosomal protein

3.9e-29

86.25

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Query:  RIVGPGLNKADKFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGVVVGNVDMEEKQVFQNVQMSINFLVSLLKKSCQSI
        R++GPGLNKA KFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGV VGNV MEEKQ+FQNVQMS+NFLVSLLKK+ Q++
Subjt:  RIVGPGLNKADKFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGVVVGNVDMEEKQVFQNVQMSINFLVSLLKKSCQSI

A0A6J1CLJ2 Ribosomal protein

8.6e-29

86.25

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Query:  RIVGPGLNKADKFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGVVVGNVDMEEKQVFQNVQMSINFLVSLLKKSCQSI
        R++GPGLNKA KFPTLVTHQE LESKVNETKAMVKFQLKKVLCMGV VGNV MEEKQVFQNVQMS+NFLVSLLKK+ Q++
Subjt:  RIVGPGLNKADKFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGVVVGNVDMEEKQVFQNVQMSINFLVSLLKKSCQSI

A0A6J1JCI3 Ribosomal protein

1.5e-28

86.25

Show/hide

Query:  RIVGPGLNKADKFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGVVVGNVDMEEKQVFQNVQMSINFLVSLLKKSCQSI
        R++GPGLNKA KFPTLVTHQE LESKVNETKAMVKFQLKKVLCMGV VGNV MEEKQVFQNVQMS+NFLVSLLKK+ Q++
Subjt:  RIVGPGLNKADKFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGVVVGNVDMEEKQVFQNVQMSINFLVSLLKKSCQSI

A0A803R995 Uncharacterized protein

8.6e-29

83.95

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Query:  RIVGPGLNKADKFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGVVVGNVDMEEKQVFQNVQMSINFLVSLLKKSCQSIY
        R++GPGLNKA KFPTLVTHQE LESKVNETKAMVKFQLKKVLCMGV VGN+ MEEKQVFQNVQMS+NFLVSLLKK+ Q+++
Subjt:  RIVGPGLNKADKFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGVVVGNVDMEEKQVFQNVQMSINFLVSLLKKSCQSIY

SwissProt top hits

e value

%identity

Alignment

B7F845 60S ribosomal protein L10a

4.9e-29

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Query:  RIVGPGLNKADKFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGVVVGNVDMEEKQVFQNVQMSINFLVSLLKKSCQSI
        R++GPGLNKA KFPTLVTHQE LESKVNETKA VKFQLKKVLCMGV VGN+ MEEKQ+ QN+QMS+NFLVSLLKK+ Q++
Subjt:  RIVGPGLNKADKFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGVVVGNVDMEEKQVFQNVQMSINFLVSLLKKSCQSI

B8B9K6 60S ribosomal protein L10a

4.9e-29

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Query:  RIVGPGLNKADKFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGVVVGNVDMEEKQVFQNVQMSINFLVSLLKKSCQSI
        R++GPGLNKA KFPTLVTHQE LESKVNETKA VKFQLKKVLCMGV VGN+ MEEKQ+ QN+QMS+NFLVSLLKK+ Q++
Subjt:  RIVGPGLNKADKFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGVVVGNVDMEEKQVFQNVQMSINFLVSLLKKSCQSI

P59230 60S ribosomal protein L10a-2

3.7e-29

Show/hide

Query:  RIVGPGLNKADKFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGVVVGNVDMEEKQVFQNVQMSINFLVSLLKKSCQSI
        R++GPGLNKA KFPTLV+HQE LE+KVNETKA VKFQLKKVLCMGV VGN+ MEEKQ+FQNVQMS+NFLVSLLKK+ Q++
Subjt:  RIVGPGLNKADKFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGVVVGNVDMEEKQVFQNVQMSINFLVSLLKKSCQSI

P59231 60S ribosomal protein L10a-3

9.8e-30

81.25

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Query:  RIVGPGLNKADKFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGVVVGNVDMEEKQVFQNVQMSINFLVSLLKKSCQSI
        R++GPGLNKA KFPTLV+HQE LESKVNETKA VKFQLKKVLCMGV VGN+ MEEKQ+FQNVQMS+NFLVSLLKK+ Q++
Subjt:  RIVGPGLNKADKFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGVVVGNVDMEEKQVFQNVQMSINFLVSLLKKSCQSI

Q8VZB9 60S ribosomal protein L10a-1

9.8e-30

81.25

Show/hide

Query:  RIVGPGLNKADKFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGVVVGNVDMEEKQVFQNVQMSINFLVSLLKKSCQSI
        R++GPGLNKA KFPTLV+HQE LESKVNETKA VKFQLKKVLCMGV VGN+ MEEKQ+FQNVQMS+NFLVSLLKK+ Q++
Subjt:  RIVGPGLNKADKFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGVVVGNVDMEEKQVFQNVQMSINFLVSLLKKSCQSI

Arabidopsis top hits

e value

%identity

Alignment

AT1G08360.1 Ribosomal protein L1p/L10e family

7.0e-31

81.25

Show/hide

Query:  RIVGPGLNKADKFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGVVVGNVDMEEKQVFQNVQMSINFLVSLLKKSCQSI
        R++GPGLNKA KFPTLV+HQE LESKVNETKA VKFQLKKVLCMGV VGN+ MEEKQ+FQNVQMS+NFLVSLLKK+ Q++
Subjt:  RIVGPGLNKADKFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGVVVGNVDMEEKQVFQNVQMSINFLVSLLKKSCQSI

AT2G27530.1 Ribosomal protein L1p/L10e family

2.6e-30

Show/hide

Query:  RIVGPGLNKADKFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGVVVGNVDMEEKQVFQNVQMSINFLVSLLKKSCQSI
        R++GPGLNKA KFPTLV+HQE LE+KVNETKA VKFQLKKVLCMGV VGN+ MEEKQ+FQNVQMS+NFLVSLLKK+ Q++
Subjt:  RIVGPGLNKADKFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGVVVGNVDMEEKQVFQNVQMSINFLVSLLKKSCQSI

AT2G27530.2 Ribosomal protein L1p/L10e family

2.6e-30

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Query:  RIVGPGLNKADKFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGVVVGNVDMEEKQVFQNVQMSINFLVSLLKKSCQSI
        R++GPGLNKA KFPTLV+HQE LE+KVNETKA VKFQLKKVLCMGV VGN+ MEEKQ+FQNVQMS+NFLVSLLKK+ Q++
Subjt:  RIVGPGLNKADKFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGVVVGNVDMEEKQVFQNVQMSINFLVSLLKKSCQSI

AT5G22440.1 Ribosomal protein L1p/L10e family

7.0e-31

81.25

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Query:  RIVGPGLNKADKFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGVVVGNVDMEEKQVFQNVQMSINFLVSLLKKSCQSI
        R++GPGLNKA KFPTLV+HQE LESKVNETKA VKFQLKKVLCMGV VGN+ MEEKQ+FQNVQMS+NFLVSLLKK+ Q++
Subjt:  RIVGPGLNKADKFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGVVVGNVDMEEKQVFQNVQMSINFLVSLLKKSCQSI

AT5G22440.2 Ribosomal protein L1p/L10e family

7.0e-31

81.25

Show/hide

Query:  RIVGPGLNKADKFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGVVVGNVDMEEKQVFQNVQMSINFLVSLLKKSCQSI
        R++GPGLNKA KFPTLV+HQE LESKVNETKA VKFQLKKVLCMGV VGN+ MEEKQ+FQNVQMS+NFLVSLLKK+ Q++
Subjt:  RIVGPGLNKADKFPTLVTHQELLESKVNETKAMVKFQLKKVLCMGVVVGNVDMEEKQVFQNVQMSINFLVSLLKKSCQSI

Sequences

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CDS sequence

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ATGCCCACGCCGGCGAGTCTCTCTCCCTCTCCCTCTCCCTCTCCCTCTCGCTGTCTTCGTCGAGCAGCCCTCCAGTCGCGCCAGTTTCGTTCTCCATCTCCCTCTCGGTT
TTGTGCAAAGCGATTCGCATCAGATCCACGCATTTTTTCCTTTCGTCGTCTTCTTTCCTTGCCCAAAGCGGCCGCGAGCAGCCCAACCCATCCTAATGTGGTATTGCATT
TTTTTTTTCGGATTGTTGGCCCTGGTCTTAACAAAGCAGATAAGTTCCCAACATTGGTGACACACCAAGAATTGCTTGAATCCAAAGTGAATGAGACCAAGGCAATGGTC
AAGTTTCAATTGAAGAAGGTTCTTTGCATGGGAGTTGTCGTGGGAAATGTTGACATGGAGGAGAAGCAAGTTTTCCAAAATGTGCAAATGAGCATCAACTTCCTGGTTTC
TTTGTTGAAAAAGAGCTGTCAGTCAATATATCACAAATTGTCTAGGGACAGCTTGACTGAAGCAGCTGCTTTGAGGGAAAGGTTTTTGCTAGGTACAGGTGTTAGTAGAA
GAGTGGCTGCTGCAACTGCTTCTGCAGCAGAAGCAGCTGGTAAAAGCGGTTTCAAATCTTTCATGGTTGCTTTACAACGTTGTGGTAGTACTGTGGCAATAGTCCAACAA
GGGTTTGTAGTGGAATTCTGTGTCTATAGAATTGTGTTTCTCGTGTTTAACAGTAGTGTTGGCAGAGGCATTTTCCCAAATTCTGAGAAGTTAGGTTCCATTCCAATTCC
AATGGCCACTGCCCAAGTTTCCCTCCAAAACTTCTTCTCAATCCCAACCGTCGGTTTCGATTTCCGACCGAGCAAATCCAGTCGACCAACCGGCCTCACACAGAGCAGAA
AGTCAAAGTGGGTCATTCGATCAAAATTGGCAGATCAAAGCTCCGCAGCGTCGCGATGTTGCCCTCTGCAGAATAGGAAAAAACTCTCGGGTTGCCCTAGCGTCGCGATG
CTAGGACAACAACGTCTCGACGCTTTTGCTTCGGCGCAAATTCCAGAATCTTTCCCTTATCCGAACAGCGTCCCAACGCTACTTGGGAGGGTCTCGACGCTCGTGATGTT
CCAGGGGTAG

mRNA sequence

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Protein sequence

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MPTPASLSPSPSPSPSRCLRRAALQSRQFRSPSPSRFCAKRFASDPRIFSFRRLLSLPKAAASSPTHPNVVLHFFFRIVGPGLNKADKFPTLVTHQELLESKVNETKAMV
KFQLKKVLCMGVVVGNVDMEEKQVFQNVQMSINFLVSLLKKSCQSIYHKLSRDSLTEAAALRERFLLGTGVSRRVAAATASAAEAAGKSGFKSFMVALQRCGSTVAIVQQ
GFVVEFCVYRIVFLVFNSSVGRGIFPNSEKLGSIPIPMATAQVSLQNFFSIPTVGFDFRPSKSSRPTGLTQSRKSKWVIRSKLADQSSAASRCCPLQNRKKLSGCPSVAM
LGQQRLDAFASAQIPESFPYPNSVPTLLGRVSTLVMFQG

Lag0034665 (gene) of Sponge gourd (AG-4) v1 genome