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Lag0034676 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0034676
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPMD domain-containing protein
Genome locationchr3:9693882..9694530
RNA-Seq ExpressionLag0034676
SyntenyLag0034676
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EEF23949.1 conserved hypothetical protein [Ricinus communis]4.2e-2480Show/hide
Query:  MAGFLVQGKRVAIAPAVLASIYYGLGTVAQEKEGPGQCNAEFPVHYFYAWLDWYFPKLYMAAFAP--GKAERLCP
        MAGFLVQGKRVAIAPAVLASIYYGLG VAQ+K GPGQCNAEFPVHYFYAWLD YFPKLYM    P  GK +   P
Subjt:  MAGFLVQGKRVAIAPAVLASIYYGLGTVAQEKEGPGQCNAEFPVHYFYAWLDWYFPKLYMAAFAP--GKAERLCP

EEF26390.1 conserved hypothetical protein, partial [Ricinus communis]4.2e-2480Show/hide
Query:  MAGFLVQGKRVAIAPAVLASIYYGLGTVAQEKEGPGQCNAEFPVHYFYAWLDWYFPKLYMAAFAP--GKAERLCP
        MAGFLVQGKRVAIAPAVLASIYYGLG VAQ+K GPGQCNAEFPVHYFYAWLD YFPKLYM    P  GK +   P
Subjt:  MAGFLVQGKRVAIAPAVLASIYYGLGTVAQEKEGPGQCNAEFPVHYFYAWLDWYFPKLYMAAFAP--GKAERLCP

GFS28827.1 hypothetical protein Acr_00g0004140 [Actinidia rufa]1.6e-2393.33Show/hide
Query:  MAGFLVQGKRVAIAPAVLASIYYGLGTVAQEKEGPGQCNAEFPVHYFYAWLDWYFPKLYM
        MAG LVQGKRVAIAPAVLASIYYGLG VAQEK GPGQCNAEFPVHYFYAWLD YFPKLYM
Subjt:  MAGFLVQGKRVAIAPAVLASIYYGLGTVAQEKEGPGQCNAEFPVHYFYAWLDWYFPKLYM

KAB1227959.1 hypothetical protein CJ030_MR1G013839 [Morella rubra]1.6e-2364.81Show/hide
Query:  ARELFANEARLRNSQVRRLSRILGSLVEPFVLPNNRTTSNVIRPETFVMAGFLVQGKRVAIAPAVLASIYYGLGTVAQEKEGPGQCNAEFPVHYFYAWLD
        A+E +  EA +       L   L   +  FVLPNNR  SNVIRPETFVMAGFLVQGKRVAIAPAVLASIYYGLG VAQEK GPGQCNAEFP         
Subjt:  ARELFANEARLRNSQVRRLSRILGSLVEPFVLPNNRTTSNVIRPETFVMAGFLVQGKRVAIAPAVLASIYYGLGTVAQEKEGPGQCNAEFPVHYFYAWLD

Query:  WYFPKLYM
          FPKLYM
Subjt:  WYFPKLYM

KAF7117298.1 hypothetical protein RHSIM_RhsimMtG0003800 [Rhododendron simsii]1.4e-3066.67Show/hide
Query:  LFANEARLRNSQVRRLSRILGSLVEPFV---LPNNRTTSNVIRPETFVMAGFLVQGKRVAIAPAVLASIYYGLGTVAQEKEGPGQCNAEFPVHYFYAWLD
        L   EARLRNSQVRRLS ILGSLVEP      P  R +   IR         LVQG+RVAIAPAVLASIYYGLG VAQEK GPGQCNAEFPVHYFYAWLD
Subjt:  LFANEARLRNSQVRRLSRILGSLVEPFV---LPNNRTTSNVIRPETFVMAGFLVQGKRVAIAPAVLASIYYGLGTVAQEKEGPGQCNAEFPVHYFYAWLD

Query:  WYFPKLYMAAFAP--GKAERLCP
         YFPKLYM    P  GK +   P
Subjt:  WYFPKLYMAAFAP--GKAERLCP

TrEMBL top hitse value%identityAlignment
A0A6A1WRP5 PMD domain-containing protein7.8e-2464.81Show/hide
Query:  ARELFANEARLRNSQVRRLSRILGSLVEPFVLPNNRTTSNVIRPETFVMAGFLVQGKRVAIAPAVLASIYYGLGTVAQEKEGPGQCNAEFPVHYFYAWLD
        A+E +  EA +       L   L   +  FVLPNNR  SNVIRPETFVMAGFLVQGKRVAIAPAVLASIYYGLG VAQEK GPGQCNAEFP         
Subjt:  ARELFANEARLRNSQVRRLSRILGSLVEPFVLPNNRTTSNVIRPETFVMAGFLVQGKRVAIAPAVLASIYYGLGTVAQEKEGPGQCNAEFPVHYFYAWLD

Query:  WYFPKLYM
          FPKLYM
Subjt:  WYFPKLYM

A0A6A1WTF8 Uncharacterized protein4.3e-1482.69Show/hide
Query:  MAGFLVQGKRVAIAPAVLASIYYGLGTVAQEKEGPGQCNAEFPVHYFYAWLD
        MAGFLVQGKRVAIAPAVLASIYYGLG VAQEK GPGQCNAEFP++     LD
Subjt:  MAGFLVQGKRVAIAPAVLASIYYGLGTVAQEKEGPGQCNAEFPVHYFYAWLD

A0A7J0D964 Uncharacterized protein7.8e-2493.33Show/hide
Query:  MAGFLVQGKRVAIAPAVLASIYYGLGTVAQEKEGPGQCNAEFPVHYFYAWLDWYFPKLYM
        MAG LVQGKRVAIAPAVLASIYYGLG VAQEK GPGQCNAEFPVHYFYAWLD YFPKLYM
Subjt:  MAGFLVQGKRVAIAPAVLASIYYGLGTVAQEKEGPGQCNAEFPVHYFYAWLDWYFPKLYM

B9TCM5 Uncharacterized protein (Fragment)2.0e-2480Show/hide
Query:  MAGFLVQGKRVAIAPAVLASIYYGLGTVAQEKEGPGQCNAEFPVHYFYAWLDWYFPKLYMAAFAP--GKAERLCP
        MAGFLVQGKRVAIAPAVLASIYYGLG VAQ+K GPGQCNAEFPVHYFYAWLD YFPKLYM    P  GK +   P
Subjt:  MAGFLVQGKRVAIAPAVLASIYYGLGTVAQEKEGPGQCNAEFPVHYFYAWLDWYFPKLYMAAFAP--GKAERLCP

B9TJL6 Uncharacterized protein2.0e-2480Show/hide
Query:  MAGFLVQGKRVAIAPAVLASIYYGLGTVAQEKEGPGQCNAEFPVHYFYAWLDWYFPKLYMAAFAP--GKAERLCP
        MAGFLVQGKRVAIAPAVLASIYYGLG VAQ+K GPGQCNAEFPVHYFYAWLD YFPKLYM    P  GK +   P
Subjt:  MAGFLVQGKRVAIAPAVLASIYYGLGTVAQEKEGPGQCNAEFPVHYFYAWLDWYFPKLYMAAFAP--GKAERLCP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAAGTTTACGACGAGTACACTCCGAGAAGAGTTGTACGGCTTCGACGAGATTTCGAAAGAGAAGTACCATTCGGAGTGTGCCCGGGAACTCTTCGCGAACGAAGC
CCGACTCCGGAATTCTCAAGTGAGACGACTTAGCCGCATTCTTGGCTCTCTGGTTGAGCCGTTTGTCCTTCCGAACAACCGCACAACGTCCAACGTCATTCGCCCGGAAA
CATTCGTCATGGCCGGGTTCTTGGTGCAGGGAAAGAGAGTAGCCATAGCTCCGGCCGTCCTTGCCAGCATTTATTACGGTTTGGGCACTGTTGCCCAAGAGAAAGAGGGT
CCAGGCCAGTGCAATGCGGAATTCCCGGTCCACTACTTCTATGCATGGCTAGACTGGTATTTTCCTAAGCTGTATATGGCCGCTTTCGCACCTGGGAAAGCGGAAAGATT
ATGCCCCGGAGATGCTTGCAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAAGTTTACGACGAGTACACTCCGAGAAGAGTTGTACGGCTTCGACGAGATTTCGAAAGAGAAGTACCATTCGGAGTGTGCCCGGGAACTCTTCGCGAACGAAGC
CCGACTCCGGAATTCTCAAGTGAGACGACTTAGCCGCATTCTTGGCTCTCTGGTTGAGCCGTTTGTCCTTCCGAACAACCGCACAACGTCCAACGTCATTCGCCCGGAAA
CATTCGTCATGGCCGGGTTCTTGGTGCAGGGAAAGAGAGTAGCCATAGCTCCGGCCGTCCTTGCCAGCATTTATTACGGTTTGGGCACTGTTGCCCAAGAGAAAGAGGGT
CCAGGCCAGTGCAATGCGGAATTCCCGGTCCACTACTTCTATGCATGGCTAGACTGGTATTTTCCTAAGCTGTATATGGCCGCTTTCGCACCTGGGAAAGCGGAAAGATT
ATGCCCCGGAGATGCTTGCAATTGA
Protein sequenceShow/hide protein sequence
MAKFTTSTLREELYGFDEISKEKYHSECARELFANEARLRNSQVRRLSRILGSLVEPFVLPNNRTTSNVIRPETFVMAGFLVQGKRVAIAPAVLASIYYGLGTVAQEKEG
PGQCNAEFPVHYFYAWLDWYFPKLYMAAFAPGKAERLCPGDACN