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Lag0034679 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0034679
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTransposon TX1 uncharacterized 149 kDa protein
Genome locationchr3:9722906..9723280
RNA-Seq ExpressionLag0034679
SyntenyLag0034679
Gene Ontology termsGO:0050789 - regulation of biological process (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN70928.1 hypothetical protein VITISV_016057 [Vitis vinifera]6.9e-1738.94Show/hide
Query:  GYVFMEKLKGIKNHLIKWNRDTFGHITDKKCSIMERIDDIDRLEENGGMSSGLLTERSCLKADLMSIVLQEQQMLLQKCKLQWLKDGDENTNFFHRWMTV
        G+ FM+KL+ +K  L  WN++TFG + ++K +I++ I +ID +E+ G +SS L  +R  +K +L  ++L+E+    QK K++W+KDGD N+  FH+    
Subjt:  GYVFMEKLKGIKNHLIKWNRDTFGHITDKKCSIMERIDDIDRLEENGGMSSGLLTERSCLKADLMSIVLQEQQMLLQKCKLQWLKDGDENTNFFHRWMTV

Query:  RKNKMKISFLEDQ
        R+N+  I FLE++
Subjt:  RKNKMKISFLEDQ

CAN72837.1 hypothetical protein VITISV_031500 [Vitis vinifera]1.5e-1638.79Show/hide
Query:  GFPGYVFMEKLKGIKNHLIKWNRDTFGHITDKKCSIMERIDDIDRLEENGGMSSGLLTERSCLKADLMSIVLQEQQMLLQKCKLQWLKDGDENTNFFHRW
        G+ G+ FM KL+ +K  L  WN++TFG + ++K SI + I +ID +E+ G +SS L  +R+  K +L  ++L+E+    QK K++W+K+GD N+  FH+ 
Subjt:  GFPGYVFMEKLKGIKNHLIKWNRDTFGHITDKKCSIMERIDDIDRLEENGGMSSGLLTERSCLKADLMSIVLQEQQMLLQKCKLQWLKDGDENTNFFHRW

Query:  MTVRKNKMKISFLEDQ
           R+NK  I  LE++
Subjt:  MTVRKNKMKISFLEDQ

CAN77570.1 hypothetical protein VITISV_008516 [Vitis vinifera]1.5e-1638.94Show/hide
Query:  GYVFMEKLKGIKNHLIKWNRDTFGHITDKKCSIMERIDDIDRLEENGGMSSGLLTERSCLKADLMSIVLQEQQMLLQKCKLQWLKDGDENTNFFHRWMTV
        G+ FM+KL+ +K  L  WN++TFG + ++K +I++ I +ID +E+ G +SS L  +R   K +L  ++L+E+    QK K++W+KDGD N+  FH+    
Subjt:  GYVFMEKLKGIKNHLIKWNRDTFGHITDKKCSIMERIDDIDRLEENGGMSSGLLTERSCLKADLMSIVLQEQQMLLQKCKLQWLKDGDENTNFFHRWMTV

Query:  RKNKMKISFLEDQ
        R+N+  I FLE++
Subjt:  RKNKMKISFLEDQ

RVW16207.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]6.2e-1837.82Show/hide
Query:  GFPGYVFMEKLKGIKNHLIKWNRDTFGHITDKKCSIMERIDDIDRLEENGGMSSGLLTERSCLKADLMSIVLQEQQMLLQKCKLQWLKDGDENTNFFHRW
        G+ G+ FM KL+ +K  L +WN+D+FG + ++K SI+  + + D LE+ GG+S  LL +R+  K +L  ++L+E+    +K +++W+K+GD N+NFFH+ 
Subjt:  GFPGYVFMEKLKGIKNHLIKWNRDTFGHITDKKCSIMERIDDIDRLEENGGMSSGLLTERSCLKADLMSIVLQEQQMLLQKCKLQWLKDGDENTNFFHRW

Query:  MTVRKNKMKISFLEDQGAI
           R+N+  I  LE++ A+
Subjt:  MTVRKNKMKISFLEDQGAI

RVW94282.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]1.2e-1639.66Show/hide
Query:  GFPGYVFMEKLKGIKNHLIKWNRDTFGHITDKKCSIMERIDDIDRLEENGGMSSGLLTERSCLKADLMSIVLQEQQMLLQKCKLQWLKDGDENTNFFHRW
        G+ G+ FM KL+ IK  L  WN++TFG + ++K SI++ I +ID +++ G +S  L  +R   K +L  ++L+E+    QK K++W+KDGD N+ FFH+ 
Subjt:  GFPGYVFMEKLKGIKNHLIKWNRDTFGHITDKKCSIMERIDDIDRLEENGGMSSGLLTERSCLKADLMSIVLQEQQMLLQKCKLQWLKDGDENTNFFHRW

Query:  MTVRKNKMKISFLEDQ
           R+N+  I FLE++
Subjt:  MTVRKNKMKISFLEDQ

TrEMBL top hitse value%identityAlignment
A0A438BZ22 Transposon TX1 uncharacterized 149 kDa protein3.0e-1837.82Show/hide
Query:  GFPGYVFMEKLKGIKNHLIKWNRDTFGHITDKKCSIMERIDDIDRLEENGGMSSGLLTERSCLKADLMSIVLQEQQMLLQKCKLQWLKDGDENTNFFHRW
        G+ G+ FM KL+ +K  L +WN+D+FG + ++K SI+  + + D LE+ GG+S  LL +R+  K +L  ++L+E+    +K +++W+K+GD N+NFFH+ 
Subjt:  GFPGYVFMEKLKGIKNHLIKWNRDTFGHITDKKCSIMERIDDIDRLEENGGMSSGLLTERSCLKADLMSIVLQEQQMLLQKCKLQWLKDGDENTNFFHRW

Query:  MTVRKNKMKISFLEDQGAI
           R+N+  I  LE++ A+
Subjt:  MTVRKNKMKISFLEDQGAI

A0A438IC57 Transposon TX1 uncharacterized 149 kDa protein5.7e-1739.66Show/hide
Query:  GFPGYVFMEKLKGIKNHLIKWNRDTFGHITDKKCSIMERIDDIDRLEENGGMSSGLLTERSCLKADLMSIVLQEQQMLLQKCKLQWLKDGDENTNFFHRW
        G+ G+ FM KL+ IK  L  WN++TFG + ++K SI++ I +ID +++ G +S  L  +R   K +L  ++L+E+    QK K++W+KDGD N+ FFH+ 
Subjt:  GFPGYVFMEKLKGIKNHLIKWNRDTFGHITDKKCSIMERIDDIDRLEENGGMSSGLLTERSCLKADLMSIVLQEQQMLLQKCKLQWLKDGDENTNFFHRW

Query:  MTVRKNKMKISFLEDQ
           R+N+  I FLE++
Subjt:  MTVRKNKMKISFLEDQ

A0A438K369 Transposon TX1 uncharacterized 149 kDa protein7.4e-1736.13Show/hide
Query:  GFPGYVFMEKLKGIKNHLIKWNRDTFGHITDKKCSIMERIDDIDRLEENGGMSSGLLTERSCLKADLMSIVLQEQQMLLQKCKLQWLKDGDENTNFFHRW
        G+ G+ FM KL+ +K +L +WN+ +FG + ++K SI++ I ++D +E+ GG+SS L+ +R+  K +L  ++L+E+    QK +++W+K+GD N+ FFH+ 
Subjt:  GFPGYVFMEKLKGIKNHLIKWNRDTFGHITDKKCSIMERIDDIDRLEENGGMSSGLLTERSCLKADLMSIVLQEQQMLLQKCKLQWLKDGDENTNFFHRW

Query:  MTVRKNKMKISFLEDQGAI
           R+N+  I  LE++  +
Subjt:  MTVRKNKMKISFLEDQGAI

A5BYB2 Reverse transcriptase domain-containing protein7.4e-1738.79Show/hide
Query:  GFPGYVFMEKLKGIKNHLIKWNRDTFGHITDKKCSIMERIDDIDRLEENGGMSSGLLTERSCLKADLMSIVLQEQQMLLQKCKLQWLKDGDENTNFFHRW
        G+ G+ FM KL+ +K  L  WN++TFG + ++K SI + I +ID +E+ G +SS L  +R+  K +L  ++L+E+    QK K++W+K+GD N+  FH+ 
Subjt:  GFPGYVFMEKLKGIKNHLIKWNRDTFGHITDKKCSIMERIDDIDRLEENGGMSSGLLTERSCLKADLMSIVLQEQQMLLQKCKLQWLKDGDENTNFFHRW

Query:  MTVRKNKMKISFLEDQ
           R+NK  I  LE++
Subjt:  MTVRKNKMKISFLEDQ

A5C6D8 Reverse transcriptase domain-containing protein3.3e-1738.94Show/hide
Query:  GYVFMEKLKGIKNHLIKWNRDTFGHITDKKCSIMERIDDIDRLEENGGMSSGLLTERSCLKADLMSIVLQEQQMLLQKCKLQWLKDGDENTNFFHRWMTV
        G+ FM+KL+ +K  L  WN++TFG + ++K +I++ I +ID +E+ G +SS L  +R  +K +L  ++L+E+    QK K++W+KDGD N+  FH+    
Subjt:  GYVFMEKLKGIKNHLIKWNRDTFGHITDKKCSIMERIDDIDRLEENGGMSSGLLTERSCLKADLMSIVLQEQQMLLQKCKLQWLKDGDENTNFFHRWMTV

Query:  RKNKMKISFLEDQ
        R+N+  I FLE++
Subjt:  RKNKMKISFLEDQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G43760.1 DNAse I-like superfamily protein3.4e-0630.17Show/hide
Query:  PVGFPGYVFMEKLKGIKNHLIKWNRDTFGHITDKKCSIMERIDDI-DRLEENGGMSSGLLTERSCLKADLMSIVLQEQQMLLQKCKLQWLKDGDENTNFF
        PVG   +   E LK  K      NR  FG+I  K    ++ ++ I  +L  N   S   +   +  K +  +  L  +    QK +++WL+DGD NT FF
Subjt:  PVGFPGYVFMEKLKGIKNHLIKWNRDTFGHITDKKCSIMERIDDI-DRLEENGGMSSGLLTERSCLKADLMSIVLQEQQMLLQKCKLQWLKDGDENTNFF

Query:  HRWMTVRKNKMKISFL
        H+ +   + K  I FL
Subjt:  HRWMTVRKNKMKISFL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCCTGTCGGCTTTCCTGGTTATGTGTTCATGGAGAAGCTTAAAGGCATCAAAAATCATTTGATCAAGTGGAATAGGGATACTTTCGGCCATATTACTGATAAAAA
GTGCTCCATTATGGAGAGGATTGATGATATAGATAGGTTAGAGGAAAATGGGGGCATGTCCAGTGGCTTGCTTACAGAAAGAAGTTGTTTAAAAGCTGATCTTATGAGCA
TTGTCCTTCAGGAACAACAAATGCTTTTGCAGAAATGTAAACTTCAGTGGCTGAAAGATGGGGATGAGAACACCAATTTTTTCCATAGATGGATGACGGTTAGAAAGAAC
AAAATGAAGATTAGCTTTCTAGAAGATCAAGGGGCAATCTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAACCCTGTCGGCTTTCCTGGTTATGTGTTCATGGAGAAGCTTAAAGGCATCAAAAATCATTTGATCAAGTGGAATAGGGATACTTTCGGCCATATTACTGATAAAAA
GTGCTCCATTATGGAGAGGATTGATGATATAGATAGGTTAGAGGAAAATGGGGGCATGTCCAGTGGCTTGCTTACAGAAAGAAGTTGTTTAAAAGCTGATCTTATGAGCA
TTGTCCTTCAGGAACAACAAATGCTTTTGCAGAAATGTAAACTTCAGTGGCTGAAAGATGGGGATGAGAACACCAATTTTTTCCATAGATGGATGACGGTTAGAAAGAAC
AAAATGAAGATTAGCTTTCTAGAAGATCAAGGGGCAATCTCTTAA
Protein sequenceShow/hide protein sequence
MNPVGFPGYVFMEKLKGIKNHLIKWNRDTFGHITDKKCSIMERIDDIDRLEENGGMSSGLLTERSCLKADLMSIVLQEQQMLLQKCKLQWLKDGDENTNFFHRWMTVRKN
KMKISFLEDQGAIS