; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0034681 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0034681
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionProtein FAR1-RELATED SEQUENCE 4-like
Genome locationchr3:9733858..9735107
RNA-Seq ExpressionLag0034681
SyntenyLag0034681
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsIPR004332 - Transposase, MuDR, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039579.1 protein FAR1-RELATED SEQUENCE 2-like [Cucumis melo var. makuwa]1.1e-6242.38Show/hide
Query:  LLNVVVLFDGRWDENNRYSVFKSDSVLVPEGCTIQEFNECIRSKVFPSGKHMITRLTMYRNGINKSNIIRITDDRDVTWFMSNIGDGMVSDICVVADHY-
        L  V  +F GRW E+ RY  ++   V VP   + QEF  CI+ ++FP+ +  ++RLT+Y    N S +IRI DD+DV+W M  +     + + +V D   
Subjt:  LLNVVVLFDGRWDENNRYSVFKSDSVLVPEGCTIQEFNECIRSKVFPSGKHMITRLTMYRNGINKSNIIRITDDRDVTWFMSNIGDGMVSDICVVADHY-

Query:  --------------------------------------------SVFQDNDQLRKAIYLLALKNSFQLRTIKSNQKSFVVGCKDVACCWYIRASRHLDGG
                                                    S+F+    L+KAIY+LAL +SF+L T+ SN+ SF + CKD AC WY+ AS      
Subjt:  --------------------------------------------SVFQDNDQLRKAIYLLALKNSFQLRTIKSNQKSFVVGCKDVACCWYIRASRHLDGG

Query:  LWMVRKFVDRHECPVDIVKNDHRQATTWLVGECVKSFLKVNDKVQCRPRDVISYMRRKHGVNISYDKAWRGRELALTAIRGSPEASYALIPAFSAALIEK
        +W+VRKF D H C VD+VKNDH+QAT+ +V EC K   K+NDK  CRP DVI+YM+  HGVN+SYDKAWRGRE+AL +IRG+ E SYA++ AFS ALI  
Subjt:  LWMVRKFVDRHECPVDIVKNDHRQATTWLVGECVKSFLKVNDKVQCRPRDVISYMRRKHGVNISYDKAWRGRELALTAIRGSPEASYALIPAFSAALIEK

Query:  NP
        NP
Subjt:  NP

KAA0061274.1 uncharacterized protein E6C27_scaffold455G001170 [Cucumis melo var. makuwa]8.1e-5345.04Show/hide
Query:  IIRITDDRDVTWFMSNIGDGMVSDICVVAD------------------------------------------HY---SVFQDNDQLRKAIYLLALKNSFQ
        +IRI DD+DV+W M  +     +D+ +V D                                          H    S+F     L+K+IY+LAL +SF+
Subjt:  IIRITDDRDVTWFMSNIGDGMVSDICVVAD------------------------------------------HY---SVFQDNDQLRKAIYLLALKNSFQ

Query:  LRTIKSNQKSFVVGCKDVACCWYIRASRHLDGGLWMVRKFVDRHECPVDIVKNDHRQATTWLVGECVKSFLKVNDKVQCRPRDVISYMRRKHGVNISYDK
        L T++SN+ SF + CKD +C WY+RAS      +W+VRKF D H C VD+VKNDH+QAT+W+V EC K   K+NDK  CRP DVI+YM+  HGVNISYDK
Subjt:  LRTIKSNQKSFVVGCKDVACCWYIRASRHLDGGLWMVRKFVDRHECPVDIVKNDHRQATTWLVGECVKSFLKVNDKVQCRPRDVISYMRRKHGVNISYDK

Query:  AWRGRELALTAIRGSPEASYALIPAFSAALIEKNPGFAAATD
        AWRGRE+AL +IRG+PE SYA++ AFS ALI  NPG   A +
Subjt:  AWRGRELALTAIRGSPEASYALIPAFSAALIEKNPGFAAATD

KAA0064137.1 MuDRA-like transposase [Cucumis melo var. makuwa]5.2e-6041.1Show/hide
Query:  LLNVVVLFDGRWDENNRYSVFKSDSVLVPEGCTIQEFNECIRSKVFPSGKHMITRLTMYRNGINKSNIIRITDDRDVTWFMSNIGDGMVSDICVVAD---
        L  V  +F  RW E+ RY  ++   V VP   + QEF  CI+ ++FP+ +  ++RLT+Y    N S +I I DD+DV+W M  +     +D+ +V D   
Subjt:  LLNVVVLFDGRWDENNRYSVFKSDSVLVPEGCTIQEFNECIRSKVFPSGKHMITRLTMYRNGINKSNIIRITDDRDVTWFMSNIGDGMVSDICVVAD---

Query:  ---------------------------------------HY---SVFQDNDQLRKAIYLLALKNSFQLRTIKSNQKSFVVGCKDVACCWYIRASRHLDGG
                                               H    S+F+    L+KAIY+LAL +SF+L T++SN+ SF + CKD AC WY+RA       
Subjt:  ---------------------------------------HY---SVFQDNDQLRKAIYLLALKNSFQLRTIKSNQKSFVVGCKDVACCWYIRASRHLDGG

Query:  LWMVRKFVDRHECPVDIVKNDHRQATTWLVGECVKSFLKVNDKVQCRPRDVISYMRRKHGVNISYDKAWRGRELALTAIRGSPEASYALIPAFSAALIEK
        ++  RKF D H C VD+VKNDH+QAT+W+V EC K   K+NDK  C P +VI+YM+  H VN+SYDKAWRGRE+AL +IRG+PE SYA++ AFS ALI  
Subjt:  LWMVRKFVDRHECPVDIVKNDHRQATTWLVGECVKSFLKVNDKVQCRPRDVISYMRRKHGVNISYDKAWRGRELALTAIRGSPEASYALIPAFSAALIEK

Query:  NPGFAAATD
        NPG   A +
Subjt:  NPGFAAATD

KAA0067552.1 protein FAR1-RELATED SEQUENCE 2-like [Cucumis melo var. makuwa]8.3e-6643.04Show/hide
Query:  LLNVVVLFDGRWDENNRYSVFKSDSVLVPEGCTIQEFNECIRSKVFPSGKHMITRLTMYRNGINKSNIIRITDDRDVTWFMSNIGDGMVSDICVVAD---
        L  V  +F GRW E+ RY  ++   V VP   + QEF  CI+ ++FP+ +  I  LT+Y    N S +IRI DD+DV+W M  +     +D+ +V D   
Subjt:  LLNVVVLFDGRWDENNRYSVFKSDSVLVPEGCTIQEFNECIRSKVFPSGKHMITRLTMYRNGINKSNIIRITDDRDVTWFMSNIGDGMVSDICVVAD---

Query:  ---------------------------------------HY---SVFQDNDQLRKAIYLLALKNSFQLRTIKSNQKSFVVGCKDVACCWYIRASRHLDGG
                                               H    S+F+    L+KAIY+LAL +SF+L T++SN+ SF + CKD +C WY+RAS      
Subjt:  ---------------------------------------HY---SVFQDNDQLRKAIYLLALKNSFQLRTIKSNQKSFVVGCKDVACCWYIRASRHLDGG

Query:  LWMVRKFVDRHECPVDIVKNDHRQATTWLVGECVKSFLKVNDKVQCRPRDVISYMRRKHGVNISYDKAWRGRELALTAIRGSPEASYALIPAFSAALIEK
        +W++RKF D H C VD+VKNDH+QAT+W+V EC K   K NDK  CRP DVI+YM+  HGVNISYDKAWRGRE+AL +I+G+PE SYA++ AFS ALI  
Subjt:  LWMVRKFVDRHECPVDIVKNDHRQATTWLVGECVKSFLKVNDKVQCRPRDVISYMRRKHGVNISYDKAWRGRELALTAIRGSPEASYALIPAFSAALIEK

Query:  NPGFAAATD
        NPG   A +
Subjt:  NPGFAAATD

XP_008455803.1 PREDICTED: uncharacterized protein LOC103495899 [Cucumis melo]1.2e-5344.71Show/hide
Query:  RLTMYRNGINKSNIIRITDDRDVTWFMSNIGDGMVSDICVVAD------------------------------------------HY---SVFQDNDQLR
        +LT+Y    N S +IRI DD+DV+W M  +     +D+ VV D                                          H    S+F+    L+
Subjt:  RLTMYRNGINKSNIIRITDDRDVTWFMSNIGDGMVSDICVVAD------------------------------------------HY---SVFQDNDQLR

Query:  KAIYLLALKNSFQLRTIKSNQKSFVVGCKDVACCWYIRASRHLDGGLWMVRKFVDRHECPVDIVKNDHRQATTWLVGECVKSFLKVNDKVQCRPRDVISY
        KAIY+LAL +SF+L T++SN+ SF + CKD +C WY+RAS      +W+VRKF+  H C VD+VKNDH+QAT+W+V EC K   K NDKV CRP DVI+Y
Subjt:  KAIYLLALKNSFQLRTIKSNQKSFVVGCKDVACCWYIRASRHLDGGLWMVRKFVDRHECPVDIVKNDHRQATTWLVGECVKSFLKVNDKVQCRPRDVISY

Query:  MRRKHGVNISYDKAWRGRELALTAIRGSPEASYALIPAFSAALIEKNPGFAAATD
        M+  H VNISYDKAW GRE+AL +IRG+PE SYA++ AFS ALI  NPG   A +
Subjt:  MRRKHGVNISYDKAWRGRELALTAIRGSPEASYALIPAFSAALIEKNPGFAAATD

TrEMBL top hitse value%identityAlignment
A0A1S3C300 uncharacterized protein LOC1034958996.0e-5444.71Show/hide
Query:  RLTMYRNGINKSNIIRITDDRDVTWFMSNIGDGMVSDICVVAD------------------------------------------HY---SVFQDNDQLR
        +LT+Y    N S +IRI DD+DV+W M  +     +D+ VV D                                          H    S+F+    L+
Subjt:  RLTMYRNGINKSNIIRITDDRDVTWFMSNIGDGMVSDICVVAD------------------------------------------HY---SVFQDNDQLR

Query:  KAIYLLALKNSFQLRTIKSNQKSFVVGCKDVACCWYIRASRHLDGGLWMVRKFVDRHECPVDIVKNDHRQATTWLVGECVKSFLKVNDKVQCRPRDVISY
        KAIY+LAL +SF+L T++SN+ SF + CKD +C WY+RAS      +W+VRKF+  H C VD+VKNDH+QAT+W+V EC K   K NDKV CRP DVI+Y
Subjt:  KAIYLLALKNSFQLRTIKSNQKSFVVGCKDVACCWYIRASRHLDGGLWMVRKFVDRHECPVDIVKNDHRQATTWLVGECVKSFLKVNDKVQCRPRDVISY

Query:  MRRKHGVNISYDKAWRGRELALTAIRGSPEASYALIPAFSAALIEKNPGFAAATD
        M+  H VNISYDKAW GRE+AL +IRG+PE SYA++ AFS ALI  NPG   A +
Subjt:  MRRKHGVNISYDKAWRGRELALTAIRGSPEASYALIPAFSAALIEKNPGFAAATD

A0A5A7TEC9 Protein FAR1-RELATED SEQUENCE 2-like5.5e-6342.38Show/hide
Query:  LLNVVVLFDGRWDENNRYSVFKSDSVLVPEGCTIQEFNECIRSKVFPSGKHMITRLTMYRNGINKSNIIRITDDRDVTWFMSNIGDGMVSDICVVADHY-
        L  V  +F GRW E+ RY  ++   V VP   + QEF  CI+ ++FP+ +  ++RLT+Y    N S +IRI DD+DV+W M  +     + + +V D   
Subjt:  LLNVVVLFDGRWDENNRYSVFKSDSVLVPEGCTIQEFNECIRSKVFPSGKHMITRLTMYRNGINKSNIIRITDDRDVTWFMSNIGDGMVSDICVVADHY-

Query:  --------------------------------------------SVFQDNDQLRKAIYLLALKNSFQLRTIKSNQKSFVVGCKDVACCWYIRASRHLDGG
                                                    S+F+    L+KAIY+LAL +SF+L T+ SN+ SF + CKD AC WY+ AS      
Subjt:  --------------------------------------------SVFQDNDQLRKAIYLLALKNSFQLRTIKSNQKSFVVGCKDVACCWYIRASRHLDGG

Query:  LWMVRKFVDRHECPVDIVKNDHRQATTWLVGECVKSFLKVNDKVQCRPRDVISYMRRKHGVNISYDKAWRGRELALTAIRGSPEASYALIPAFSAALIEK
        +W+VRKF D H C VD+VKNDH+QAT+ +V EC K   K+NDK  CRP DVI+YM+  HGVN+SYDKAWRGRE+AL +IRG+ E SYA++ AFS ALI  
Subjt:  LWMVRKFVDRHECPVDIVKNDHRQATTWLVGECVKSFLKVNDKVQCRPRDVISYMRRKHGVNISYDKAWRGRELALTAIRGSPEASYALIPAFSAALIEK

Query:  NP
        NP
Subjt:  NP

A0A5A7V1Z6 CCHC-type domain-containing protein3.9e-5345.04Show/hide
Query:  IIRITDDRDVTWFMSNIGDGMVSDICVVAD------------------------------------------HY---SVFQDNDQLRKAIYLLALKNSFQ
        +IRI DD+DV+W M  +     +D+ +V D                                          H    S+F     L+K+IY+LAL +SF+
Subjt:  IIRITDDRDVTWFMSNIGDGMVSDICVVAD------------------------------------------HY---SVFQDNDQLRKAIYLLALKNSFQ

Query:  LRTIKSNQKSFVVGCKDVACCWYIRASRHLDGGLWMVRKFVDRHECPVDIVKNDHRQATTWLVGECVKSFLKVNDKVQCRPRDVISYMRRKHGVNISYDK
        L T++SN+ SF + CKD +C WY+RAS      +W+VRKF D H C VD+VKNDH+QAT+W+V EC K   K+NDK  CRP DVI+YM+  HGVNISYDK
Subjt:  LRTIKSNQKSFVVGCKDVACCWYIRASRHLDGGLWMVRKFVDRHECPVDIVKNDHRQATTWLVGECVKSFLKVNDKVQCRPRDVISYMRRKHGVNISYDK

Query:  AWRGRELALTAIRGSPEASYALIPAFSAALIEKNPGFAAATD
        AWRGRE+AL +IRG+PE SYA++ AFS ALI  NPG   A +
Subjt:  AWRGRELALTAIRGSPEASYALIPAFSAALIEKNPGFAAATD

A0A5A7VAU3 MuDRA-like transposase2.5e-6041.1Show/hide
Query:  LLNVVVLFDGRWDENNRYSVFKSDSVLVPEGCTIQEFNECIRSKVFPSGKHMITRLTMYRNGINKSNIIRITDDRDVTWFMSNIGDGMVSDICVVAD---
        L  V  +F  RW E+ RY  ++   V VP   + QEF  CI+ ++FP+ +  ++RLT+Y    N S +I I DD+DV+W M  +     +D+ +V D   
Subjt:  LLNVVVLFDGRWDENNRYSVFKSDSVLVPEGCTIQEFNECIRSKVFPSGKHMITRLTMYRNGINKSNIIRITDDRDVTWFMSNIGDGMVSDICVVAD---

Query:  ---------------------------------------HY---SVFQDNDQLRKAIYLLALKNSFQLRTIKSNQKSFVVGCKDVACCWYIRASRHLDGG
                                               H    S+F+    L+KAIY+LAL +SF+L T++SN+ SF + CKD AC WY+RA       
Subjt:  ---------------------------------------HY---SVFQDNDQLRKAIYLLALKNSFQLRTIKSNQKSFVVGCKDVACCWYIRASRHLDGG

Query:  LWMVRKFVDRHECPVDIVKNDHRQATTWLVGECVKSFLKVNDKVQCRPRDVISYMRRKHGVNISYDKAWRGRELALTAIRGSPEASYALIPAFSAALIEK
        ++  RKF D H C VD+VKNDH+QAT+W+V EC K   K+NDK  C P +VI+YM+  H VN+SYDKAWRGRE+AL +IRG+PE SYA++ AFS ALI  
Subjt:  LWMVRKFVDRHECPVDIVKNDHRQATTWLVGECVKSFLKVNDKVQCRPRDVISYMRRKHGVNISYDKAWRGRELALTAIRGSPEASYALIPAFSAALIEK

Query:  NPGFAAATD
        NPG   A +
Subjt:  NPGFAAATD

A0A5A7VGR4 Protein FAR1-RELATED SEQUENCE 2-like4.0e-6643.04Show/hide
Query:  LLNVVVLFDGRWDENNRYSVFKSDSVLVPEGCTIQEFNECIRSKVFPSGKHMITRLTMYRNGINKSNIIRITDDRDVTWFMSNIGDGMVSDICVVAD---
        L  V  +F GRW E+ RY  ++   V VP   + QEF  CI+ ++FP+ +  I  LT+Y    N S +IRI DD+DV+W M  +     +D+ +V D   
Subjt:  LLNVVVLFDGRWDENNRYSVFKSDSVLVPEGCTIQEFNECIRSKVFPSGKHMITRLTMYRNGINKSNIIRITDDRDVTWFMSNIGDGMVSDICVVAD---

Query:  ---------------------------------------HY---SVFQDNDQLRKAIYLLALKNSFQLRTIKSNQKSFVVGCKDVACCWYIRASRHLDGG
                                               H    S+F+    L+KAIY+LAL +SF+L T++SN+ SF + CKD +C WY+RAS      
Subjt:  ---------------------------------------HY---SVFQDNDQLRKAIYLLALKNSFQLRTIKSNQKSFVVGCKDVACCWYIRASRHLDGG

Query:  LWMVRKFVDRHECPVDIVKNDHRQATTWLVGECVKSFLKVNDKVQCRPRDVISYMRRKHGVNISYDKAWRGRELALTAIRGSPEASYALIPAFSAALIEK
        +W++RKF D H C VD+VKNDH+QAT+W+V EC K   K NDK  CRP DVI+YM+  HGVNISYDKAWRGRE+AL +I+G+PE SYA++ AFS ALI  
Subjt:  LWMVRKFVDRHECPVDIVKNDHRQATTWLVGECVKSFLKVNDKVQCRPRDVISYMRRKHGVNISYDKAWRGRELALTAIRGSPEASYALIPAFSAALIEK

Query:  NPGFAAATD
        NPG   A +
Subjt:  NPGFAAATD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACTCCATGCCGCAAGGTGTTCTACTGAACGTGGTGGTACTATTCGATGGTAGGTGGGATGAAAACAATCGGTACAGCGTTTTTAAGTCCGACAGTGTGCTAGTACC
AGAGGGATGCACAATACAAGAGTTCAATGAATGCATTCGGAGCAAGGTATTTCCGTCTGGCAAGCACATGATCACTCGGTTAACCATGTACCGGAATGGTATCAACAAGT
CTAACATAATCCGGATCACCGACGACAGGGATGTTACATGGTTTATGTCCAACATTGGTGATGGGATGGTTAGCGACATATGCGTTGTGGCTGACCACTACTCGGTTTTT
CAAGACAATGACCAGTTAAGGAAAGCAATATACTTGCTTGCTTTAAAAAACAGTTTCCAGCTACGAACCATTAAGTCCAACCAGAAATCGTTTGTTGTTGGATGCAAGGA
CGTTGCATGTTGTTGGTACATCCGGGCGTCTCGTCATTTGGATGGGGGTTTGTGGATGGTTCGCAAGTTCGTGGATAGGCACGAATGCCCTGTTGATATTGTAAAAAATG
ACCACAGGCAAGCCACAACATGGCTCGTGGGGGAGTGTGTGAAGTCATTTCTAAAAGTAAATGACAAGGTCCAATGTCGCCCGCGTGATGTTATCAGCTATATGAGGAGG
AAACATGGCGTCAACATCAGTTATGACAAGGCTTGGAGGGGGCGGGAGCTTGCACTTACTGCCATCAGAGGTTCGCCCGAGGCGTCGTATGCACTAATTCCAGCATTCTC
CGCTGCTCTGATCGAGAAAAACCCAGGTTTTGCTGCAGCAACTGATTTCACAAGCAGAAGGCAGAAAGTCTGGGTAATAAAATTCTGCACGTGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCACTCCATGCCGCAAGGTGTTCTACTGAACGTGGTGGTACTATTCGATGGTAGGTGGGATGAAAACAATCGGTACAGCGTTTTTAAGTCCGACAGTGTGCTAGTACC
AGAGGGATGCACAATACAAGAGTTCAATGAATGCATTCGGAGCAAGGTATTTCCGTCTGGCAAGCACATGATCACTCGGTTAACCATGTACCGGAATGGTATCAACAAGT
CTAACATAATCCGGATCACCGACGACAGGGATGTTACATGGTTTATGTCCAACATTGGTGATGGGATGGTTAGCGACATATGCGTTGTGGCTGACCACTACTCGGTTTTT
CAAGACAATGACCAGTTAAGGAAAGCAATATACTTGCTTGCTTTAAAAAACAGTTTCCAGCTACGAACCATTAAGTCCAACCAGAAATCGTTTGTTGTTGGATGCAAGGA
CGTTGCATGTTGTTGGTACATCCGGGCGTCTCGTCATTTGGATGGGGGTTTGTGGATGGTTCGCAAGTTCGTGGATAGGCACGAATGCCCTGTTGATATTGTAAAAAATG
ACCACAGGCAAGCCACAACATGGCTCGTGGGGGAGTGTGTGAAGTCATTTCTAAAAGTAAATGACAAGGTCCAATGTCGCCCGCGTGATGTTATCAGCTATATGAGGAGG
AAACATGGCGTCAACATCAGTTATGACAAGGCTTGGAGGGGGCGGGAGCTTGCACTTACTGCCATCAGAGGTTCGCCCGAGGCGTCGTATGCACTAATTCCAGCATTCTC
CGCTGCTCTGATCGAGAAAAACCCAGGTTTTGCTGCAGCAACTGATTTCACAAGCAGAAGGCAGAAAGTCTGGGTAATAAAATTCTGCACGTGCTAA
Protein sequenceShow/hide protein sequence
MHSMPQGVLLNVVVLFDGRWDENNRYSVFKSDSVLVPEGCTIQEFNECIRSKVFPSGKHMITRLTMYRNGINKSNIIRITDDRDVTWFMSNIGDGMVSDICVVADHYSVF
QDNDQLRKAIYLLALKNSFQLRTIKSNQKSFVVGCKDVACCWYIRASRHLDGGLWMVRKFVDRHECPVDIVKNDHRQATTWLVGECVKSFLKVNDKVQCRPRDVISYMRR
KHGVNISYDKAWRGRELALTAIRGSPEASYALIPAFSAALIEKNPGFAAATDFTSRRQKVWVIKFCTC