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Lag0034682 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0034682
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionDNA-directed RNA polymerase V subunit 5C-like
Genome locationchr3:9743273..9744052
RNA-Seq ExpressionLag0034682
SyntenyLag0034682
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]2.0e-2636.4Show/hide
Query:  SEEQLHSALVTCAVEGASWKVARNSVRTLLAAYLKPEANVWHTFARSRLLSTTHDTTVSKERVLLIFSILKILSIDVGKLLAKEIVACSKRKVGRLFFPN
        +++ L + L T A  GA W V+     T + + L P A VW+ F +SRLL TTH  TVSK+R+LL+ S+L   SI+VG+++  EI AC+ RK G LFFP+
Subjt:  SEEQLHSALVTCAVEGASWKVARNSVRTLLAAYLKPEANVWHTFARSRLLSTTHDTTVSKERVLLIFSILKILSIDVGKLLAKEIVACSKRKVGRLFFPN

Query:  LITALCLRAQIEVDENEEILMDKGIIDSASITRLHGE------------KKGRSSTNMVCG--------VEEILRQQR----RLMRQMEHSESQQKTYWQ
        LIT LC  A+     NEE L + G ID+ ++ R+  E            +   +S+N   G        +E+ L QQ      +M  ++H+  QQ+ +W 
Subjt:  LITALCLRAQIEVDENEEILMDKGIIDSASITRLHGE------------KKGRSSTNMVCG--------VEEILRQQR----RLMRQMEHSESQQKTYWQ

Query:  YAHLRDSAMEKTFEYSFEELPQPFPQFP
        Y+  RD+A++K  + +F      FP FP
Subjt:  YAHLRDSAMEKTFEYSFEELPQPFPQFP

PON50458.1 hypothetical protein PanWU01x14_223230, partial [Parasponia andersonii]7.3e-2138.12Show/hide
Query:  SEEQLHSALVTCAVEGASWKVARNSVRTLLAAYLKPEANVWHTFARSRLLSTTHDTTVSKERVLLIFSILKILSIDVGKLLAKEIVACSKRKVGRLFFPN
        +E +L   L T A+ GA W V+   V T L + L P A +W+ F +SRLL TTH   VSKERVLL++S+L   SI++G+++ +EI AC+ RK G LFFP+
Subjt:  SEEQLHSALVTCAVEGASWKVARNSVRTLLAAYLKPEANVWHTFARSRLLSTTHDTTVSKERVLLIFSILKILSIDVGKLLAKEIVACSKRKVGRLFFPN

Query:  LITALCLRAQIEVDENEEILMDKGIIDSASITRL---------HGEKKGR-SSTNMVCGVEEILRQQRRLMRQMEHSESQQ
        LI  +C  A+     NEE L + G ID+ ++ R+         H     R ++ +      E L+Q + L + +   E QQ
Subjt:  LITALCLRAQIEVDENEEILMDKGIIDSASITRL---------HGEKKGR-SSTNMVCGVEEILRQQRRLMRQMEHSESQQ

PON59596.1 hypothetical protein PanWU01x14_158080 [Parasponia andersonii]7.3e-2137.76Show/hide
Query:  LKPEANVWHTFARSRLLSTTHDTTVSKERVLLIFSILKILSIDVGKLLAKEIVACSKRKVGRLFFPNLITALCLRAQIEVDENEEILMDKGIIDSASITR
        L P A VW+ F +SRLL TTH  TVSK+R+LL++S+L   SI+VG+++  EI AC+ RK G LFFP+LIT LC  A+     NEE L   G ID+ ++ R
Subjt:  LKPEANVWHTFARSRLLSTTHDTTVSKERVLLIFSILKILSIDVGKLLAKEIVACSKRKVGRLFFPNLITALCLRAQIEVDENEEILMDKGIIDSASITR

Query:  LHGEKKGR------------SSTNMVCG--------VEEILRQQR----RLMRQMEHSESQQKTYWQYAHLRDSAMEKTFEYSFEELPQPFPQFPT
        +  E +              +S++   G        +E+ L QQ      +M  ++H+  QQ+ +W Y+  RD+A++K  + +F    +P P FPT
Subjt:  LHGEKKGR------------SSTNMVCG--------VEEILRQQR----RLMRQMEHSESQQKTYWQYAHLRDSAMEKTFEYSFEELPQPFPQFPT

PON62892.1 hypothetical protein PanWU01x14_135680 [Parasponia andersonii]1.7e-2239.56Show/hide
Query:  APSEEQLHSALVTCAVEGASWKVARNSVRTLLAAYLKPEANVWHTFARSRLLSTTHDTTVSKERVLLIFSILKILSIDVGKLLAKEIVACSKRKVGRLFF
        A +E +L + L T A+ GA W V+     T L + L P A VW+ F +SRLL TTH  TVSKERVLL++S+L   SI+VG+++ +EI A + RK G LFF
Subjt:  APSEEQLHSALVTCAVEGASWKVARNSVRTLLAAYLKPEANVWHTFARSRLLSTTHDTTVSKERVLLIFSILKILSIDVGKLLAKEIVACSKRKVGRLFF

Query:  PNLITALCLRAQIEVDENEEILMDKGIIDSASITRL---------HGEKKGRSSTNMVCGVEEILRQQRRLMRQMEHSESQQ
        P+LIT +C  A+     NEE L + G ID+ ++ R+         H     R +        E L+Q + L +++   E QQ
Subjt:  PNLITALCLRAQIEVDENEEILMDKGIIDSASITRL---------HGEKKGRSSTNMVCGVEEILRQQRRLMRQMEHSESQQ

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]9.9e-2637.44Show/hide
Query:  SEEQLHSALVTCAVEGASWKVARNSVRTLLAAYLKPEANVWHTFARSRLLSTTHDTTVSKERVLLIFSILKILSIDVGKLLAKEIVACSKRKVGRLFFPN
        +E +L + L T A  GA W V+     T + + L P A VW+ F +SRLL TTH   VSK+R+LL+ S+L   SI+VG+++  EI AC+ +K G LFFP+
Subjt:  SEEQLHSALVTCAVEGASWKVARNSVRTLLAAYLKPEANVWHTFARSRLLSTTHDTTVSKERVLLIFSILKILSIDVGKLLAKEIVACSKRKVGRLFFPN

Query:  LITALCLRAQIEVDENEEILMDKGIIDSASITRLHGE------------KKGRSSTNMVCGVEEILRQQRRL---MRQMEHSESQQKTYWQYAHLRDSAM
        LIT LC  A   V  NEE L + G ID+ ++ R+  E            +   +S++   G  ++L+Q + L   + Q EH+  QQ+ +W Y+  RD+A+
Subjt:  LITALCLRAQIEVDENEEILMDKGIIDSASITRLHGE------------KKGRSSTNMVCGVEEILRQQRRL---MRQMEHSESQQKTYWQYAHLRDSAM

Query:  EKTFEYSFEELPQPFPQFP
        +K  + +F      FP FP
Subjt:  EKTFEYSFEELPQPFPQFP

TrEMBL top hitse value%identityAlignment
A0A2P5BCG4 Uncharacterized protein (Fragment)9.7e-2736.4Show/hide
Query:  SEEQLHSALVTCAVEGASWKVARNSVRTLLAAYLKPEANVWHTFARSRLLSTTHDTTVSKERVLLIFSILKILSIDVGKLLAKEIVACSKRKVGRLFFPN
        +++ L + L T A  GA W V+     T + + L P A VW+ F +SRLL TTH  TVSK+R+LL+ S+L   SI+VG+++  EI AC+ RK G LFFP+
Subjt:  SEEQLHSALVTCAVEGASWKVARNSVRTLLAAYLKPEANVWHTFARSRLLSTTHDTTVSKERVLLIFSILKILSIDVGKLLAKEIVACSKRKVGRLFFPN

Query:  LITALCLRAQIEVDENEEILMDKGIIDSASITRLHGE------------KKGRSSTNMVCG--------VEEILRQQR----RLMRQMEHSESQQKTYWQ
        LIT LC  A+     NEE L + G ID+ ++ R+  E            +   +S+N   G        +E+ L QQ      +M  ++H+  QQ+ +W 
Subjt:  LITALCLRAQIEVDENEEILMDKGIIDSASITRLHGE------------KKGRSSTNMVCG--------VEEILRQQR----RLMRQMEHSESQQKTYWQ

Query:  YAHLRDSAMEKTFEYSFEELPQPFPQFP
        Y+  RD+A++K  + +F      FP FP
Subjt:  YAHLRDSAMEKTFEYSFEELPQPFPQFP

A0A2P5BNT0 Uncharacterized protein (Fragment)3.6e-2138.12Show/hide
Query:  SEEQLHSALVTCAVEGASWKVARNSVRTLLAAYLKPEANVWHTFARSRLLSTTHDTTVSKERVLLIFSILKILSIDVGKLLAKEIVACSKRKVGRLFFPN
        +E +L   L T A+ GA W V+   V T L + L P A +W+ F +SRLL TTH   VSKERVLL++S+L   SI++G+++ +EI AC+ RK G LFFP+
Subjt:  SEEQLHSALVTCAVEGASWKVARNSVRTLLAAYLKPEANVWHTFARSRLLSTTHDTTVSKERVLLIFSILKILSIDVGKLLAKEIVACSKRKVGRLFFPN

Query:  LITALCLRAQIEVDENEEILMDKGIIDSASITRL---------HGEKKGR-SSTNMVCGVEEILRQQRRLMRQMEHSESQQ
        LI  +C  A+     NEE L + G ID+ ++ R+         H     R ++ +      E L+Q + L + +   E QQ
Subjt:  LITALCLRAQIEVDENEEILMDKGIIDSASITRL---------HGEKKGR-SSTNMVCGVEEILRQQRRLMRQMEHSESQQ

A0A2P5CEY2 Uncharacterized protein3.6e-2137.76Show/hide
Query:  LKPEANVWHTFARSRLLSTTHDTTVSKERVLLIFSILKILSIDVGKLLAKEIVACSKRKVGRLFFPNLITALCLRAQIEVDENEEILMDKGIIDSASITR
        L P A VW+ F +SRLL TTH  TVSK+R+LL++S+L   SI+VG+++  EI AC+ RK G LFFP+LIT LC  A+     NEE L   G ID+ ++ R
Subjt:  LKPEANVWHTFARSRLLSTTHDTTVSKERVLLIFSILKILSIDVGKLLAKEIVACSKRKVGRLFFPNLITALCLRAQIEVDENEEILMDKGIIDSASITR

Query:  LHGEKKGR------------SSTNMVCG--------VEEILRQQR----RLMRQMEHSESQQKTYWQYAHLRDSAMEKTFEYSFEELPQPFPQFPT
        +  E +              +S++   G        +E+ L QQ      +M  ++H+  QQ+ +W Y+  RD+A++K  + +F    +P P FPT
Subjt:  LHGEKKGR------------SSTNMVCG--------VEEILRQQR----RLMRQMEHSESQQKTYWQYAHLRDSAMEKTFEYSFEELPQPFPQFPT

A0A2P5CPE8 Uncharacterized protein8.5e-2339.56Show/hide
Query:  APSEEQLHSALVTCAVEGASWKVARNSVRTLLAAYLKPEANVWHTFARSRLLSTTHDTTVSKERVLLIFSILKILSIDVGKLLAKEIVACSKRKVGRLFF
        A +E +L + L T A+ GA W V+     T L + L P A VW+ F +SRLL TTH  TVSKERVLL++S+L   SI+VG+++ +EI A + RK G LFF
Subjt:  APSEEQLHSALVTCAVEGASWKVARNSVRTLLAAYLKPEANVWHTFARSRLLSTTHDTTVSKERVLLIFSILKILSIDVGKLLAKEIVACSKRKVGRLFF

Query:  PNLITALCLRAQIEVDENEEILMDKGIIDSASITRL---------HGEKKGRSSTNMVCGVEEILRQQRRLMRQMEHSESQQ
        P+LIT +C  A+     NEE L + G ID+ ++ R+         H     R +        E L+Q + L +++   E QQ
Subjt:  PNLITALCLRAQIEVDENEEILMDKGIIDSASITRL---------HGEKKGRSSTNMVCGVEEILRQQRRLMRQMEHSESQQ

A0A2P5DXM3 Uncharacterized protein4.8e-2637.44Show/hide
Query:  SEEQLHSALVTCAVEGASWKVARNSVRTLLAAYLKPEANVWHTFARSRLLSTTHDTTVSKERVLLIFSILKILSIDVGKLLAKEIVACSKRKVGRLFFPN
        +E +L + L T A  GA W V+     T + + L P A VW+ F +SRLL TTH   VSK+R+LL+ S+L   SI+VG+++  EI AC+ +K G LFFP+
Subjt:  SEEQLHSALVTCAVEGASWKVARNSVRTLLAAYLKPEANVWHTFARSRLLSTTHDTTVSKERVLLIFSILKILSIDVGKLLAKEIVACSKRKVGRLFFPN

Query:  LITALCLRAQIEVDENEEILMDKGIIDSASITRLHGE------------KKGRSSTNMVCGVEEILRQQRRL---MRQMEHSESQQKTYWQYAHLRDSAM
        LIT LC  A   V  NEE L + G ID+ ++ R+  E            +   +S++   G  ++L+Q + L   + Q EH+  QQ+ +W Y+  RD+A+
Subjt:  LITALCLRAQIEVDENEEILMDKGIIDSASITRLHGE------------KKGRSSTNMVCGVEEILRQQRRL---MRQMEHSESQQKTYWQYAHLRDSAM

Query:  EKTFEYSFEELPQPFPQFP
        +K  + +F      FP FP
Subjt:  EKTFEYSFEELPQPFPQFP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATTGCTCCATCTGAAGAGCAGCTCCATTCAGCTCTAGTCACCTGTGCTGTTGAAGGAGCAAGCTGGAAGGTGGCAAGGAACTCAGTTCGAACACTATTGGCTGC
ATACCTTAAGCCCGAAGCAAACGTTTGGCACACCTTTGCAAGGAGTAGGTTGCTCTCCACTACTCATGACACCACGGTGTCTAAAGAAAGAGTTCTCTTAATTTTTTCCA
TCTTGAAAATCCTGAGCATTGACGTGGGAAAGCTCTTGGCAAAGGAGATTGTGGCATGTTCAAAAAGGAAGGTAGGAAGATTGTTTTTCCCAAATCTGATTACAGCATTA
TGTTTGAGGGCTCAAATCGAGGTGGATGAGAATGAAGAAATTTTAATGGACAAAGGAATCATAGATTCAGCATCTATAACAAGATTACATGGGGAGAAGAAGGGAAGGTC
AAGCACAAATATGGTTTGTGGGGTTGAGGAGATTTTAAGGCAGCAGAGAAGGTTGATGAGGCAAATGGAACACAGTGAGAGTCAGCAAAAGACTTATTGGCAATATGCTC
ATCTTAGGGACTCTGCCATGGAGAAAACATTTGAATACAGCTTTGAGGAGCTTCCTCAGCCATTTCCTCAATTCCCAACATGTTTATTTGACCCGTGGTGCCCTTCCCCA
TCTCCCAGCGGGAATGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGATTGCTCCATCTGAAGAGCAGCTCCATTCAGCTCTAGTCACCTGTGCTGTTGAAGGAGCAAGCTGGAAGGTGGCAAGGAACTCAGTTCGAACACTATTGGCTGC
ATACCTTAAGCCCGAAGCAAACGTTTGGCACACCTTTGCAAGGAGTAGGTTGCTCTCCACTACTCATGACACCACGGTGTCTAAAGAAAGAGTTCTCTTAATTTTTTCCA
TCTTGAAAATCCTGAGCATTGACGTGGGAAAGCTCTTGGCAAAGGAGATTGTGGCATGTTCAAAAAGGAAGGTAGGAAGATTGTTTTTCCCAAATCTGATTACAGCATTA
TGTTTGAGGGCTCAAATCGAGGTGGATGAGAATGAAGAAATTTTAATGGACAAAGGAATCATAGATTCAGCATCTATAACAAGATTACATGGGGAGAAGAAGGGAAGGTC
AAGCACAAATATGGTTTGTGGGGTTGAGGAGATTTTAAGGCAGCAGAGAAGGTTGATGAGGCAAATGGAACACAGTGAGAGTCAGCAAAAGACTTATTGGCAATATGCTC
ATCTTAGGGACTCTGCCATGGAGAAAACATTTGAATACAGCTTTGAGGAGCTTCCTCAGCCATTTCCTCAATTCCCAACATGTTTATTTGACCCGTGGTGCCCTTCCCCA
TCTCCCAGCGGGAATGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNTGA
Protein sequenceShow/hide protein sequence
MEIAPSEEQLHSALVTCAVEGASWKVARNSVRTLLAAYLKPEANVWHTFARSRLLSTTHDTTVSKERVLLIFSILKILSIDVGKLLAKEIVACSKRKVGRLFFPNLITAL
CLRAQIEVDENEEILMDKGIIDSASITRLHGEKKGRSSTNMVCGVEEILRQQRRLMRQMEHSESQQKTYWQYAHLRDSAMEKTFEYSFEELPQPFPQFPTCLFDPWCPSP
SPSGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX