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Lag0034686 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0034686
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr3:9785696..9786169
RNA-Seq ExpressionLag0034686
SyntenyLag0034686
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142767.1 uncharacterized protein LOC111012805 [Momordica charantia]3.7e-1036.23Show/hide
Query:  VSRAQKYMSAEELLKS------KKSEREHKRSSSS---------DRDNQGDYLKKFERYTPTSIPQEQIWMEIRNTNLLNAPRKLKSNPDNKDKSQYCLF
        +SRAQ+YMSA E   S      K+++++ +RS            DR  Q D  +KFE+YT T++P EQ+ MEI+N  LL  P ++ ++   + K +YCLF
Subjt:  VSRAQKYMSAEELLKS------KKSEREHKRSSSS---------DRDNQGDYLKKFERYTPTSIPQEQIWMEIRNTNLLNAPRKLKSNPDNKDKSQYCLF

Query:  HRDHRHSAK---------RRDIWNGYLKEFTTKIEADQ
        H DH H+ +            I  GYLKE+  + +A Q
Subjt:  HRDHRHSAK---------RRDIWNGYLKEFTTKIEADQ

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]4.0e-1239.13Show/hide
Query:  VSRAQKYMSAEELLKSK----------KSEREHKRSSSS-----DRDNQGDYLKKFERYTPTSIPQEQIWMEIRNTNLLNAPRKLKSNPDNKDKSQYCLF
        +SRAQ+YMSA E   SK          K ER   +   S     DR +Q D  +KFE+YTPT++P EQ+ MEI++  LL  P ++K++   + K +YCLF
Subjt:  VSRAQKYMSAEELLKSK----------KSEREHKRSSSS-----DRDNQGDYLKKFERYTPTSIPQEQIWMEIRNTNLLNAPRKLKSNPDNKDKSQYCLF

Query:  HRDHRHSAK---------RRDIWNGYLKEFTTKIEADQ
        HRDH H+ +            I  GYLKE+  + +A Q
Subjt:  HRDHRHSAK---------RRDIWNGYLKEFTTKIEADQ

XP_022159192.1 uncharacterized protein LOC111025612 [Momordica charantia]1.8e-1237.96Show/hide
Query:  VSRAQKYMSAEEL------LKSKKSEREHKRSSSSDRDN----------QGDYLKKFERYTPTSIPQEQIWMEIRNTNLLNAPRKLKSNPDNKDKSQYCL
        +SRAQKYMSAEE       L+ K+++++ +RS      +          Q D  +KFE+YTPT++P EQ+ MEI++  LL  P  +K+ P+ + K +YCL
Subjt:  VSRAQKYMSAEEL------LKSKKSEREHKRSSSSDRDN----------QGDYLKKFERYTPTSIPQEQIWMEIRNTNLLNAPRKLKSNPDNKDKSQYCL

Query:  FHRDHRHSA---------KRRDIWNGYLKEFTTKIEA
        FHRDH H+              I  GYLKE+   ++A
Subjt:  FHRDHRHSA---------KRRDIWNGYLKEFTTKIEA

XP_022159368.1 uncharacterized protein LOC111025785 [Momordica charantia]1.5e-1136.96Show/hide
Query:  VSRAQKYMSAEELLKS------KKSEREHKRSSSS---------DRDNQGDYLKKFERYTPTSIPQEQIWMEIRNTNLLNAPRKLKSNPDNKDKSQYCLF
        +SRAQ+YMSA E   S      K+++++ +RS            DR +Q D  +KFE+YTPT++P EQ+ MEI++  LL  P ++K     + K +YCLF
Subjt:  VSRAQKYMSAEELLKS------KKSEREHKRSSSS---------DRDNQGDYLKKFERYTPTSIPQEQIWMEIRNTNLLNAPRKLKSNPDNKDKSQYCLF

Query:  HRDHRHSAK---------RRDIWNGYLKEFTTKIEADQ
        HRDH H+ +            I  GYL+E+  + +A Q
Subjt:  HRDHRHSAK---------RRDIWNGYLKEFTTKIEADQ

XP_024042801.1 uncharacterized protein LOC112099618 [Citrus clementina]3.4e-1134.78Show/hide
Query:  QFVSRAQKYMSAEELLKSK----------------KSEREHKRSSSSDRDNQGDYL--KKFERYTPTSIPQEQIWMEIRNTNLLNAPRKLKSNPDNKDKS
        + +SRAQKY + +EL  +K                K E+   +  +S  + +G  +   +F RYTP ++P+EQ+ M+IRN +LL  P+ +K  P+ +D+S
Subjt:  QFVSRAQKYMSAEELLKSK----------------KSEREHKRSSSSDRDNQGDYL--KKFERYTPTSIPQEQIWMEIRNTNLLNAPRKLKSNPDNKDKS

Query:  QYCLFHRDHRHSAK---------RRDIWNGYLKEFTTK
        +YC +HRDHRH+ +         +  I  GYLKEF  K
Subjt:  QYCLFHRDHRHSAK---------RRDIWNGYLKEFTTK

TrEMBL top hitse value%identityAlignment
A0A2N9GH90 Ribonuclease H1.9e-0733.08Show/hide
Query:  QFVSRAQKYMSAEELLKSKKSEREHKRSSSSDRDNQGDYLKKFERYTPTSIPQEQIWMEIRNTNLLNAPRKLKSNPDNKDKSQYCLFHRDHRHSAK----
        + +  AQ++M+ EE L ++      KR    DR+ +G + ++F  +TP + P + I+M+IRN   L  P KL ++PD + + +YC FHRDH H+ +    
Subjt:  QFVSRAQKYMSAEELLKSKKSEREHKRSSSSDRDNQGDYLKKFERYTPTSIPQEQIWMEIRNTNLLNAPRKLKSNPDNKDKSQYCLFHRDHRHSAK----

Query:  -----RRDIWNGYLKEFTTKIEADQRWPRP
                I  G L+ F   +E  QR  RP
Subjt:  -----RRDIWNGYLKEFTTKIEADQRWPRP

A0A6J1CNT2 uncharacterized protein LOC1110128051.8e-1036.23Show/hide
Query:  VSRAQKYMSAEELLKS------KKSEREHKRSSSS---------DRDNQGDYLKKFERYTPTSIPQEQIWMEIRNTNLLNAPRKLKSNPDNKDKSQYCLF
        +SRAQ+YMSA E   S      K+++++ +RS            DR  Q D  +KFE+YT T++P EQ+ MEI+N  LL  P ++ ++   + K +YCLF
Subjt:  VSRAQKYMSAEELLKS------KKSEREHKRSSSS---------DRDNQGDYLKKFERYTPTSIPQEQIWMEIRNTNLLNAPRKLKSNPDNKDKSQYCLF

Query:  HRDHRHSAK---------RRDIWNGYLKEFTTKIEADQ
        H DH H+ +            I  GYLKE+  + +A Q
Subjt:  HRDHRHSAK---------RRDIWNGYLKEFTTKIEADQ

A0A6J1DWY0 uncharacterized protein LOC1110252931.9e-1239.13Show/hide
Query:  VSRAQKYMSAEELLKSK----------KSEREHKRSSSS-----DRDNQGDYLKKFERYTPTSIPQEQIWMEIRNTNLLNAPRKLKSNPDNKDKSQYCLF
        +SRAQ+YMSA E   SK          K ER   +   S     DR +Q D  +KFE+YTPT++P EQ+ MEI++  LL  P ++K++   + K +YCLF
Subjt:  VSRAQKYMSAEELLKSK----------KSEREHKRSSSS-----DRDNQGDYLKKFERYTPTSIPQEQIWMEIRNTNLLNAPRKLKSNPDNKDKSQYCLF

Query:  HRDHRHSAK---------RRDIWNGYLKEFTTKIEADQ
        HRDH H+ +            I  GYLKE+  + +A Q
Subjt:  HRDHRHSAK---------RRDIWNGYLKEFTTKIEADQ

A0A6J1DYL6 uncharacterized protein LOC1110257857.3e-1236.96Show/hide
Query:  VSRAQKYMSAEELLKS------KKSEREHKRSSSS---------DRDNQGDYLKKFERYTPTSIPQEQIWMEIRNTNLLNAPRKLKSNPDNKDKSQYCLF
        +SRAQ+YMSA E   S      K+++++ +RS            DR +Q D  +KFE+YTPT++P EQ+ MEI++  LL  P ++K     + K +YCLF
Subjt:  VSRAQKYMSAEELLKS------KKSEREHKRSSSS---------DRDNQGDYLKKFERYTPTSIPQEQIWMEIRNTNLLNAPRKLKSNPDNKDKSQYCLF

Query:  HRDHRHSAK---------RRDIWNGYLKEFTTKIEADQ
        HRDH H+ +            I  GYL+E+  + +A Q
Subjt:  HRDHRHSAK---------RRDIWNGYLKEFTTKIEADQ

A0A6J1DZ52 uncharacterized protein LOC1110256128.6e-1337.96Show/hide
Query:  VSRAQKYMSAEEL------LKSKKSEREHKRSSSSDRDN----------QGDYLKKFERYTPTSIPQEQIWMEIRNTNLLNAPRKLKSNPDNKDKSQYCL
        +SRAQKYMSAEE       L+ K+++++ +RS      +          Q D  +KFE+YTPT++P EQ+ MEI++  LL  P  +K+ P+ + K +YCL
Subjt:  VSRAQKYMSAEEL------LKSKKSEREHKRSSSSDRDN----------QGDYLKKFERYTPTSIPQEQIWMEIRNTNLLNAPRKLKSNPDNKDKSQYCL

Query:  FHRDHRHSA---------KRRDIWNGYLKEFTTKIEA
        FHRDH H+              I  GYLKE+   ++A
Subjt:  FHRDHRHSA---------KRRDIWNGYLKEFTTKIEA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTTTGTCTCCCGTGCACAGAAATACATGAGCGCAGAGGAGTTGCTCAAGTCAAAGAAGTCAGAACGTGAACACAAGAGGTCTTCTTCATCTGATCGTGACAACCA
AGGAGACTACTTGAAGAAGTTTGAAAGGTACACCCCTACTTCAATCCCACAGGAGCAGATCTGGATGGAAATAAGGAATACGAACCTGCTCAACGCGCCCAGGAAGCTGA
AGTCAAATCCTGACAACAAAGACAAAAGCCAATATTGTCTCTTCCATCGAGATCACAGACATTCAGCTAAAAGACGAGATATTTGGAACGGATATCTGAAGGAGTTCACC
ACAAAGATCGAGGCAGACCAGAGATGGCCGAGGCCGACCAGAGATGGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAGTTTGTCTCCCGTGCACAGAAATACATGAGCGCAGAGGAGTTGCTCAAGTCAAAGAAGTCAGAACGTGAACACAAGAGGTCTTCTTCATCTGATCGTGACAACCA
AGGAGACTACTTGAAGAAGTTTGAAAGGTACACCCCTACTTCAATCCCACAGGAGCAGATCTGGATGGAAATAAGGAATACGAACCTGCTCAACGCGCCCAGGAAGCTGA
AGTCAAATCCTGACAACAAAGACAAAAGCCAATATTGTCTCTTCCATCGAGATCACAGACATTCAGCTAAAAGACGAGATATTTGGAACGGATATCTGAAGGAGTTCACC
ACAAAGATCGAGGCAGACCAGAGATGGCCGAGGCCGACCAGAGATGGCTAA
Protein sequenceShow/hide protein sequence
MQFVSRAQKYMSAEELLKSKKSEREHKRSSSSDRDNQGDYLKKFERYTPTSIPQEQIWMEIRNTNLLNAPRKLKSNPDNKDKSQYCLFHRDHRHSAKRRDIWNGYLKEFT
TKIEADQRWPRPTRDG