; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0034687 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0034687
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr3:9798311..9802261
RNA-Seq ExpressionLag0034687
SyntenyLag0034687
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]2.0e-3638.06Show/hide
Query:  YGFLNTGLCEEEGTEISGRRWAAVWRNPLVYFELRSSFKELARAFVTQFLGARSQPKPQINSLTVKQGRRESLKDYINRFCNEVLQVEGHDDGVALTAMI
        YG      C    T ++G   A +W   L    + SSFK LARAFVTQF+G R + +P    LT+KQ   ESL+DY+ RF  E LQVEG  D V+L A +
Subjt:  YGFLNTGLCEEEGTEISGRRWAAVWRNPLVYFELRSSFKELARAFVTQFLGARSQPKPQINSLTVKQGRRESLKDYINRFCNEVLQVEGHDDGVALTAMI

Query:  SGLQDERLLSSISKISPRPMAEADQRPRSH------------------------------------RVVVNQK---ARFERYTPLTASLEQVLAAIQDTN
        SG++DE L  S  K +P   +EA  R + +                                    R   +QK    +FE+YTP T  +EQVL  I+D  
Subjt:  SGLQDERLLSSISKISPRPMAEADQRPRSH------------------------------------RVVVNQK---ARFERYTPLTASLEQVLAAIQDTN

Query:  LLKRPEKLRLDPDRRNRNKYCMFRGDHGHAIQECIQLRDEIEALIREGYLKGFVGNDRAA-HGEQKMS
        LLK PE+++    +R++ +YC+F  DHGHA Q+C  L++E+E LIR GYLK +V   +A  +GE   S
Subjt:  LLKRPEKLRLDPDRRNRNKYCMFRGDHGHAIQECIQLRDEIEALIREGYLKGFVGNDRAA-HGEQKMS

XP_022159368.1 uncharacterized protein LOC111025785 [Momordica charantia]3.3e-3137.34Show/hide
Query:  SSFKELARAFVTQFLGARSQPKPQINSLTVKQGRRESLKDYINRFCNEVLQVEGHDDGVALTAMISGLQDERLLSSISKISPRPMAE-------------
        SSFK LARAFVTQF+G R + +P    LT+KQ   ESL DY+ RF  E LQ+E   D V+L A +SG++DE L  S  K +P   +E             
Subjt:  SSFKELARAFVTQFLGARSQPKPQINSLTVKQGRRESLKDYINRFCNEVLQVEGHDDGVALTAMISGLQDERLLSSISKISPRPMAE-------------

Query:  -------------------ADQRPRSHRVVVNQKA-------RFERYTPLTASLEQVLAAIQDTNLLKRPEKLRLDPDRRNRNKYCMFRGDHGHAIQECI
                           +  +P+  R     ++       +FE+YTP T  LEQVL  I+D  LLK PE++++   +R++ +YC+F  DH HA Q+  
Subjt:  -------------------ADQRPRSHRVVVNQKA-------RFERYTPLTASLEQVLAAIQDTNLLKRPEKLRLDPDRRNRNKYCMFRGDHGHAIQECI

Query:  QLRDEIEALIREGYLKGFVGNDRAA-HGEQKMS
         L++E+E LIR GYL+ +V   +A  +GE + S
Subjt:  QLRDEIEALIREGYLKGFVGNDRAA-HGEQKMS

XP_024042801.1 uncharacterized protein LOC112099618 [Citrus clementina]8.1e-3035.09Show/hide
Query:  SGRRWAAVWRNPLVYFELR----SSFKELARAFVTQFLGARSQPKPQINSLTVKQGRRESLKDYINRFCNEVLQVEGHDDGVALTAMISGLQDERLLSSI
        + RRW         Y +LR    SSF +L++  V QF+GAR Q  P    L VKQG+ ESLKD I RF  EV++VE + D VALT ++ GLQ  +   S+
Subjt:  SGRRWAAVWRNPLVYFELR----SSFKELARAFVTQFLGARSQPKPQINSLTVKQGRRESLKDYINRFCNEVLQVEGHDDGVALTAMISGLQDERLLSSI

Query:  SKISPRPMAE----------------------------ADQRPRSHRVVVNQ--------------KARFERYTPLTASLEQVLAAIQDTNLLKRPEKLR
        +K   R   E                            A++R      + N+              ++RF RYTPL    EQVL  I++ +LL++P+ ++
Subjt:  SKISPRPMAE----------------------------ADQRPRSHRVVVNQ--------------KARFERYTPLTASLEQVLAAIQDTNLLKRPEKLR

Query:  LDPDRRNRNKYCMFRGDHGHAIQECIQLRDEIEALIREGYLKGFVGND-------RAAHGEQKMS
        + P+RR+R+KYC +  DH H I++C  L++EI++LI+ GYLK FV  D         +H  QK+S
Subjt:  LDPDRRNRNKYCMFRGDHGHAIQECIQLRDEIEALIREGYLKGFVGND-------RAAHGEQKMS

XP_030955724.1 uncharacterized protein LOC115977839 [Quercus lobata]7.4e-3136.4Show/hide
Query:  LCEEEGTEISGRRWAAVWRNPLVYFELRSSFKELARAFVTQFLGARSQPKPQINSLTVKQGRRESLKDYINRFCNEVLQVEGHDDGVALTAMISGLQDER
        +C    T + G   A VW + +    + SSF+EL++ FV  F+G +   +   + LT++QG  ESL+ +I RF  E L V+  DD + L A  +G+  + 
Subjt:  LCEEEGTEISGRRWAAVWRNPLVYFELRSSFKELARAFVTQFLGARSQPKPQINSLTVKQGRRESLKDYINRFCNEVLQVEGHDDGVALTAMISGLQDER

Query:  LLSSISKISPRPMAEAD----QRPRSHRVVVNQKA-----------------------RFERYTPLTASLEQVLAAIQDTNLLKRPEKLRLDPDRRNRNK
         +  + +  P+ MAE      +R  +H V  +++A                       R + YTPL A L QVL  I+D   LK PEK++ DP++RN+NK
Subjt:  LLSSISKISPRPMAEAD----QRPRSHRVVVNQKA-----------------------RFERYTPLTASLEQVLAAIQDTNLLKRPEKLRLDPDRRNRNK

Query:  YCMFRGDHGHAIQECIQLRDEIEALIREGYLKGFVGNDR
        YC F  DHGH   EC  L+ +IE LIR+G LK FVG DR
Subjt:  YCMFRGDHGHAIQECIQLRDEIEALIREGYLKGFVGNDR

XP_030970531.1 uncharacterized protein LOC115990904 [Quercus lobata]8.1e-3034.38Show/hide
Query:  LCEEEGTEISGRRWAAVWRNPLVYFELRSSFKELARAFVTQFLGARSQPKPQINSLTVKQGRRESLKDYINRFCNEVLQVEGHDDGVALTAMISGLQDER
        +C    T + G   A VW + +    + SSF+EL++ FV  F+G +   +   + LT++QG  ESL+ +I RF  E L V+  DD + L A  +G+  + 
Subjt:  LCEEEGTEISGRRWAAVWRNPLVYFELRSSFKELARAFVTQFLGARSQPKPQINSLTVKQGRRESLKDYINRFCNEVLQVEGHDDGVALTAMISGLQDER

Query:  LLSSISKISPRPMAE----------------ADQRPRSHRVVVN----------------------------QKARFERYTPLTASLEQVLAAIQDTNLL
         +  + +  P+ MAE                A +R RS R+  N                               R ++YTPL A LEQVL  I+D   L
Subjt:  LLSSISKISPRPMAE----------------ADQRPRSHRVVVN----------------------------QKARFERYTPLTASLEQVLAAIQDTNLL

Query:  KRPEKLRLDPDRRNRNKYCMFRGDHGHAIQECIQLRDEIEALIREGYLKGFVGNDR
        K P+K++ DP++RNRNKYC F  DHGH   EC  L+ +IE LIR+G L+GF+G D+
Subjt:  KRPEKLRLDPDRRNRNKYCMFRGDHGHAIQECIQLRDEIEALIREGYLKGFVGNDR

TrEMBL top hitse value%identityAlignment
A0A2N9FPT8 Reverse transcriptase domain-containing protein2.0e-2937.26Show/hide
Query:  LCEEEGTEISGRRWAAVWRNPLVYFELRSSFKELARAFVTQFLGARSQPKPQINSLTVKQGRRESLKDYINRFCNEVLQVEGHDDGVALTAMISGLQDER
        +C    T + G   A +W   L+   +  SF +L+ +F   F+G +   +P  + L V+Q   E+L+ Y+ RF  E L V+G DD V LTA ISGLQ   
Subjt:  LCEEEGTEISGRRWAAVWRNPLVYFELRSSFKELARAFVTQFLGARSQPKPQINSLTVKQGRRESLKDYINRFCNEVLQVEGHDDGVALTAMISGLQDER

Query:  LLSSISKISPRPMAEADQRPRSHRVVVNQKARFERYTPLTASLEQVLAAIQDTNLLKRPEKLRLDPDRRNRNKYCMFRGDHGHAIQECIQLRDEIEALIR
         L S+ K  P  M+E  +R   +R   N+  RF  +TPL A ++++   I+D   L+ P KL  +PD+R ++KYC F  DHGH   +C  L+ +IE LI+
Subjt:  LLSSISKISPRPMAEADQRPRSHRVVVNQKARFERYTPLTASLEQVLAAIQDTNLLKRPEKLRLDPDRRNRNKYCMFRGDHGHAIQECIQLRDEIEALIR

Query:  EGYLKGFVGNDR
        +G L+ FV  D+
Subjt:  EGYLKGFVGNDR

A0A2N9HHE1 Ribonuclease H3.3e-2936.92Show/hide
Query:  LCEEEGTEISGRRWAAVWRNPLVYFELRSSFKELARAFVTQFLGARSQPKPQINSLTVKQGRRESLKDYINRFCNEVLQVEGHDDGVALTAMISGLQDER
        +C    T + G   A +W   L+   +  SF +L+ +F   F+G +   +P  + L V+Q   E+L+ Y+ RF  E L V+G DD V LTA ISGLQ   
Subjt:  LCEEEGTEISGRRWAAVWRNPLVYFELRSSFKELARAFVTQFLGARSQPKPQINSLTVKQGRRESLKDYINRFCNEVLQVEGHDDGVALTAMISGLQDER

Query:  LLSSISKISPRPMAEA--DQRPRSHRVVVNQKARFERYTPLTASLEQVLAAIQDTNLLKRPEKLRLDPDRRNRNKYCMFRGDHGHAIQECIQLRDEIEAL
         L S+ K  P  M+E     + R  R       RF  +TPL A ++++   I+D   L+ P KL  +PDRR ++KYC F  DHGH  ++C  L+ +IE L
Subjt:  LLSSISKISPRPMAEA--DQRPRSHRVVVNQKARFERYTPLTASLEQVLAAIQDTNLLKRPEKLRLDPDRRNRNKYCMFRGDHGHAIQECIQLRDEIEAL

Query:  IREGYLKGFVGNDR
        I++G L+ FV  D+
Subjt:  IREGYLKGFVGNDR

A0A2N9IUL6 Uncharacterized protein3.3e-2935.37Show/hide
Query:  YGFLNTGLCEEEGTEISGRRWAAVWRNPLVYFELRSSFKELARAFVTQFLGARSQPKPQINSLTVKQGRRESLKDYINRFCNEVLQVEGHDDGVALTAMI
        +G  +  +C    T + G   A  W N L    +  +F +L+RAF+  F+G R   +P    L ++Q   ESL+ Y+ RF  E +Q++  ++ VALTA  
Subjt:  YGFLNTGLCEEEGTEISGRRWAAVWRNPLVYFELRSSFKELARAFVTQFLGARSQPKPQINSLTVKQGRRESLKDYINRFCNEVLQVEGHDDGVALTAMI

Query:  SGLQDERLLSSISKISPRPMAEADQR------PRSHRVVVNQKARFER----YTPLTASLEQVLAAIQDTNLLKRPEKLRLDPDRRNRNKYCMFRGDHGH
        +GL     L  + K  P+ M+E   +      P++ R   +   R E     +TPL  S++QVL  IQD   ++ P KLR DP++R++N YC F  DHGH
Subjt:  SGLQDERLLSSISKISPRPMAEADQR------PRSHRVVVNQKARFER----YTPLTASLEQVLAAIQDTNLLKRPEKLRLDPDRRNRNKYCMFRGDHGH

Query:  AIQECIQLRDEIEALIREGYLKGFVGNDR
          ++C  L+++IEALIR+G L  FV  D+
Subjt:  AIQECIQLRDEIEALIREGYLKGFVGNDR

A0A6J1DWY0 uncharacterized protein LOC1110252939.7e-3738.06Show/hide
Query:  YGFLNTGLCEEEGTEISGRRWAAVWRNPLVYFELRSSFKELARAFVTQFLGARSQPKPQINSLTVKQGRRESLKDYINRFCNEVLQVEGHDDGVALTAMI
        YG      C    T ++G   A +W   L    + SSFK LARAFVTQF+G R + +P    LT+KQ   ESL+DY+ RF  E LQVEG  D V+L A +
Subjt:  YGFLNTGLCEEEGTEISGRRWAAVWRNPLVYFELRSSFKELARAFVTQFLGARSQPKPQINSLTVKQGRRESLKDYINRFCNEVLQVEGHDDGVALTAMI

Query:  SGLQDERLLSSISKISPRPMAEADQRPRSH------------------------------------RVVVNQK---ARFERYTPLTASLEQVLAAIQDTN
        SG++DE L  S  K +P   +EA  R + +                                    R   +QK    +FE+YTP T  +EQVL  I+D  
Subjt:  SGLQDERLLSSISKISPRPMAEADQRPRSH------------------------------------RVVVNQK---ARFERYTPLTASLEQVLAAIQDTN

Query:  LLKRPEKLRLDPDRRNRNKYCMFRGDHGHAIQECIQLRDEIEALIREGYLKGFVGNDRAA-HGEQKMS
        LLK PE+++    +R++ +YC+F  DHGHA Q+C  L++E+E LIR GYLK +V   +A  +GE   S
Subjt:  LLKRPEKLRLDPDRRNRNKYCMFRGDHGHAIQECIQLRDEIEALIREGYLKGFVGNDRAA-HGEQKMS

A0A6J1DYL6 uncharacterized protein LOC1110257851.6e-3137.34Show/hide
Query:  SSFKELARAFVTQFLGARSQPKPQINSLTVKQGRRESLKDYINRFCNEVLQVEGHDDGVALTAMISGLQDERLLSSISKISPRPMAE-------------
        SSFK LARAFVTQF+G R + +P    LT+KQ   ESL DY+ RF  E LQ+E   D V+L A +SG++DE L  S  K +P   +E             
Subjt:  SSFKELARAFVTQFLGARSQPKPQINSLTVKQGRRESLKDYINRFCNEVLQVEGHDDGVALTAMISGLQDERLLSSISKISPRPMAE-------------

Query:  -------------------ADQRPRSHRVVVNQKA-------RFERYTPLTASLEQVLAAIQDTNLLKRPEKLRLDPDRRNRNKYCMFRGDHGHAIQECI
                           +  +P+  R     ++       +FE+YTP T  LEQVL  I+D  LLK PE++++   +R++ +YC+F  DH HA Q+  
Subjt:  -------------------ADQRPRSHRVVVNQKA-------RFERYTPLTASLEQVLAAIQDTNLLKRPEKLRLDPDRRNRNKYCMFRGDHGHAIQECI

Query:  QLRDEIEALIREGYLKGFVGNDRAA-HGEQKMS
         L++E+E LIR GYL+ +V   +A  +GE + S
Subjt:  QLRDEIEALIREGYLKGFVGNDRAA-HGEQKMS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAAATGGGTTATATCTTTGCGTTGATATGGAGGATGTTCACGCTTTTGACTCCAATCGCCCGTCAAAGCTTCGATCTGCTCCTGCCGATTTCTTGAGTATGGTGAA
TATATTGGATCTAATTGTTGATTGTTGCAAAGGTTTGAATGAATCTGAAGACGAAGGTGGCTGCTTCTGCGATTCCTCGTTAAATACTCCGTATGGATTTCTAAATACCG
GACTTTGCGAAGAAGAAGGCACAGAAATTTCAGGAAGAAGATGGGCCGCTGTTTGGAGAAACCCTCTGGTATATTTCGAACTACGGAGTTCGTTTAAAGAATTGGCCCGA
GCGTTTGTTACGCAATTCCTCGGGGCCCGGAGCCAACCGAAGCCTCAAATCAACTCGCTGACAGTAAAACAGGGGCGTCGAGAAAGTTTGAAGGATTATATTAATAGATT
TTGTAACGAAGTTTTGCAGGTAGAAGGCCATGACGATGGAGTTGCCTTGACCGCTATGATTTCAGGTCTGCAGGATGAAAGACTGCTCAGCTCGATCAGCAAGATCAGTC
CTCGGCCAATGGCCGAGGCCGACCAGAGACCAAGGAGCCACAGGGTTGTGGTGAACCAAAAAGCCAGATTCGAGAGGTATACACCACTAACAGCTTCGCTTGAACAGGTC
TTGGCTGCAATACAGGACACAAATCTGTTGAAACGCCCAGAAAAGTTGAGATTAGACCCTGACAGGAGGAATAGAAACAAATACTGCATGTTCCGCGGAGACCACGGTCA
CGCAATCCAGGAATGCATACAATTGAGGGATGAGATAGAAGCCCTAATCCGAGAAGGTTACCTCAAGGGGTTCGTGGGGAACGACAGAGCAGCGCATGGCGAGCAAAAGA
TGTCGAAGGAATGTTACTTTATGGCGCTCAGGAACATCGACAGGAAGGTTCAAGCAACGGCCTCGAGAGTTGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTAAATGGGTTATATCTTTGCGTTGATATGGAGGATGTTCACGCTTTTGACTCCAATCGCCCGTCAAAGCTTCGATCTGCTCCTGCCGATTTCTTGAGTATGGTGAA
TATATTGGATCTAATTGTTGATTGTTGCAAAGGTTTGAATGAATCTGAAGACGAAGGTGGCTGCTTCTGCGATTCCTCGTTAAATACTCCGTATGGATTTCTAAATACCG
GACTTTGCGAAGAAGAAGGCACAGAAATTTCAGGAAGAAGATGGGCCGCTGTTTGGAGAAACCCTCTGGTATATTTCGAACTACGGAGTTCGTTTAAAGAATTGGCCCGA
GCGTTTGTTACGCAATTCCTCGGGGCCCGGAGCCAACCGAAGCCTCAAATCAACTCGCTGACAGTAAAACAGGGGCGTCGAGAAAGTTTGAAGGATTATATTAATAGATT
TTGTAACGAAGTTTTGCAGGTAGAAGGCCATGACGATGGAGTTGCCTTGACCGCTATGATTTCAGGTCTGCAGGATGAAAGACTGCTCAGCTCGATCAGCAAGATCAGTC
CTCGGCCAATGGCCGAGGCCGACCAGAGACCAAGGAGCCACAGGGTTGTGGTGAACCAAAAAGCCAGATTCGAGAGGTATACACCACTAACAGCTTCGCTTGAACAGGTC
TTGGCTGCAATACAGGACACAAATCTGTTGAAACGCCCAGAAAAGTTGAGATTAGACCCTGACAGGAGGAATAGAAACAAATACTGCATGTTCCGCGGAGACCACGGTCA
CGCAATCCAGGAATGCATACAATTGAGGGATGAGATAGAAGCCCTAATCCGAGAAGGTTACCTCAAGGGGTTCGTGGGGAACGACAGAGCAGCGCATGGCGAGCAAAAGA
TGTCGAAGGAATGTTACTTTATGGCGCTCAGGAACATCGACAGGAAGGTTCAAGCAACGGCCTCGAGAGTTGGCTGA
Protein sequenceShow/hide protein sequence
MVNGLYLCVDMEDVHAFDSNRPSKLRSAPADFLSMVNILDLIVDCCKGLNESEDEGGCFCDSSLNTPYGFLNTGLCEEEGTEISGRRWAAVWRNPLVYFELRSSFKELAR
AFVTQFLGARSQPKPQINSLTVKQGRRESLKDYINRFCNEVLQVEGHDDGVALTAMISGLQDERLLSSISKISPRPMAEADQRPRSHRVVVNQKARFERYTPLTASLEQV
LAAIQDTNLLKRPEKLRLDPDRRNRNKYCMFRGDHGHAIQECIQLRDEIEALIREGYLKGFVGNDRAAHGEQKMSKECYFMALRNIDRKVQATASRVG