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Lag0034709 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0034709
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTPR_REGION domain-containing protein
Genome locationchr3:10028960..10030857
RNA-Seq ExpressionLag0034709
SyntenyLag0034709
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588125.1 hypothetical protein SDJN03_16690, partial [Cucurbita argyrosperma subsp. sororia]1.1e-4174.42Show/hide
Query:  IHCPSSLCLCKPSSHIYSTGSVPPNLENSPHLPSEVESVIGTSGSIVETFESKPEFGDDKEQENEYGIKSSLRKPSLRSGASEEKHVKKVQWMDFSGKEL
        IHCPSSLCLC+PS HI+STGSV  +L+NSPHLPS    VI TSGS VET E K     DK  E+E+G KSSLRKP+LRSG S+EKHVK VQWMDFSGKEL
Subjt:  IHCPSSLCLCKPSSHIYSTGSVPPNLENSPHLPSEVESVIGTSGSIVETFESKPEFGDDKEQENEYGIKSSLRKPSLRSGASEEKHVKKVQWMDFSGKEL

Query:  VEIREFEPSEVEDSDYEDEDNRSCICTIL
         EIREFE SE EDSDYEDEDN SCICTIL
Subjt:  VEIREFEPSEVEDSDYEDEDNRSCICTIL

XP_004144070.1 uncharacterized protein LOC101217749 [Cucumis sativus]6.4e-5081.82Show/hide
Query:  IHCPSSLCLCKPSSHIYSTGSVPPNLENSPHLPSEVESVIGTSGSIVETFESKPEFGD---DKEQENEYGIKSSLRKPSLRSGASEEKHVKKVQWMDFSG
        IHCPSS CLC+P+ HIYSTGS+P +LENS HLPSEVESVIGTS SIVET ESK E  D   DK QENEYGIKSSLRK SLRSG S+EKHVK+VQWMDFSG
Subjt:  IHCPSSLCLCKPSSHIYSTGSVPPNLENSPHLPSEVESVIGTSGSIVETFESKPEFGD---DKEQENEYGIKSSLRKPSLRSGASEEKHVKKVQWMDFSG

Query:  KELVEIREFEPSEVEDSDYEDEDNRSCICTIL
        KELVEIREFE SE EDSDYE EDNRSCICTIL
Subjt:  KELVEIREFEPSEVEDSDYEDEDNRSCICTIL

XP_016901000.1 PREDICTED: uncharacterized protein LOC103492420 [Cucumis melo]4.0e-5283.33Show/hide
Query:  IHCPSSLCLCKPSSHIYSTGSVPPNLENSPHLPSEVESVIGTSGSIVETFESKPEF---GDDKEQENEYGIKSSLRKPSLRSGASEEKHVKKVQWMDFSG
        IHCPSS CLC+P+ HIYSTGS+P +LENS HLPSEVESVIGTSGSIVET ESK E     DDK QENEYGIKSSLRKPSLRSG S+EKHVK+VQWMDFSG
Subjt:  IHCPSSLCLCKPSSHIYSTGSVPPNLENSPHLPSEVESVIGTSGSIVETFESKPEF---GDDKEQENEYGIKSSLRKPSLRSGASEEKHVKKVQWMDFSG

Query:  KELVEIREFEPSEVEDSDYEDEDNRSCICTIL
        KELVEIREFE SE EDSDYE EDNRSCICTIL
Subjt:  KELVEIREFEPSEVEDSDYEDEDNRSCICTIL

XP_022147688.1 uncharacterized protein LOC111016556 [Momordica charantia]5.4e-4981.4Show/hide
Query:  IHCPSSLCLCKPSSHIYSTGSVPPNLENSPHLPSEVESVIGTSGSIVETFESKPEFGDDKEQENEYGIKSSLRKPSLRSGASEEKHVKKVQWMDFSGKEL
        IHCPSS CLC+PS  I +TGSVP  LENSPHLPSEVE+VIGTS SIV+TFE K E  DDKEQE EYGIKSSLRK SL+ GA E KH KKVQWMDFSGKEL
Subjt:  IHCPSSLCLCKPSSHIYSTGSVPPNLENSPHLPSEVESVIGTSGSIVETFESKPEFGDDKEQENEYGIKSSLRKPSLRSGASEEKHVKKVQWMDFSGKEL

Query:  VEIREFEPSEVEDSDYEDEDNRSCICTIL
        VEIREFEPSE ED+DYEDEDNRSCICTIL
Subjt:  VEIREFEPSEVEDSDYEDEDNRSCICTIL

XP_038879679.1 uncharacterized protein LOC120071456 [Benincasa hispida]8.6e-4779.84Show/hide
Query:  IHCPSSLCLCKPSSHIYSTGSVPPNLENSPHLPSEVESVIGTSGSIVETFESKPEFGDDKEQENEYGIKSSLRKPSLRSGASEEKHVKKVQWMDFSGKEL
        IHCPSS CLC+PS HIYSTGSVP +LENSPHLPSEV+SVIG S SIVETFESK E  DDKE      IKSSL+KPSLRS   +EKHVK+VQWMDFSGKEL
Subjt:  IHCPSSLCLCKPSSHIYSTGSVPPNLENSPHLPSEVESVIGTSGSIVETFESKPEFGDDKEQENEYGIKSSLRKPSLRSGASEEKHVKKVQWMDFSGKEL

Query:  VEIREFEPSEVEDSDYEDEDNRSCICTIL
        VEIREFEPSE EDSDYE E NRSCICTIL
Subjt:  VEIREFEPSEVEDSDYEDEDNRSCICTIL

TrEMBL top hitse value%identityAlignment
A0A0A0M2C9 Uncharacterized protein3.1e-5081.82Show/hide
Query:  IHCPSSLCLCKPSSHIYSTGSVPPNLENSPHLPSEVESVIGTSGSIVETFESKPEFGD---DKEQENEYGIKSSLRKPSLRSGASEEKHVKKVQWMDFSG
        IHCPSS CLC+P+ HIYSTGS+P +LENS HLPSEVESVIGTS SIVET ESK E  D   DK QENEYGIKSSLRK SLRSG S+EKHVK+VQWMDFSG
Subjt:  IHCPSSLCLCKPSSHIYSTGSVPPNLENSPHLPSEVESVIGTSGSIVETFESKPEFGD---DKEQENEYGIKSSLRKPSLRSGASEEKHVKKVQWMDFSG

Query:  KELVEIREFEPSEVEDSDYEDEDNRSCICTIL
        KELVEIREFE SE EDSDYE EDNRSCICTIL
Subjt:  KELVEIREFEPSEVEDSDYEDEDNRSCICTIL

A0A1S4DZ54 uncharacterized protein LOC1034924201.9e-5283.33Show/hide
Query:  IHCPSSLCLCKPSSHIYSTGSVPPNLENSPHLPSEVESVIGTSGSIVETFESKPEF---GDDKEQENEYGIKSSLRKPSLRSGASEEKHVKKVQWMDFSG
        IHCPSS CLC+P+ HIYSTGS+P +LENS HLPSEVESVIGTSGSIVET ESK E     DDK QENEYGIKSSLRKPSLRSG S+EKHVK+VQWMDFSG
Subjt:  IHCPSSLCLCKPSSHIYSTGSVPPNLENSPHLPSEVESVIGTSGSIVETFESKPEF---GDDKEQENEYGIKSSLRKPSLRSGASEEKHVKKVQWMDFSG

Query:  KELVEIREFEPSEVEDSDYEDEDNRSCICTIL
        KELVEIREFE SE EDSDYE EDNRSCICTIL
Subjt:  KELVEIREFEPSEVEDSDYEDEDNRSCICTIL

A0A6J1D1Z7 uncharacterized protein LOC1110165562.6e-4981.4Show/hide
Query:  IHCPSSLCLCKPSSHIYSTGSVPPNLENSPHLPSEVESVIGTSGSIVETFESKPEFGDDKEQENEYGIKSSLRKPSLRSGASEEKHVKKVQWMDFSGKEL
        IHCPSS CLC+PS  I +TGSVP  LENSPHLPSEVE+VIGTS SIV+TFE K E  DDKEQE EYGIKSSLRK SL+ GA E KH KKVQWMDFSGKEL
Subjt:  IHCPSSLCLCKPSSHIYSTGSVPPNLENSPHLPSEVESVIGTSGSIVETFESKPEFGDDKEQENEYGIKSSLRKPSLRSGASEEKHVKKVQWMDFSGKEL

Query:  VEIREFEPSEVEDSDYEDEDNRSCICTIL
        VEIREFEPSE ED+DYEDEDNRSCICTIL
Subjt:  VEIREFEPSEVEDSDYEDEDNRSCICTIL

A0A6J1EXK0 uncharacterized protein LOC1114391832.6e-4173.64Show/hide
Query:  IHCPSSLCLCKPSSHIYSTGSVPPNLENSPHLPSEVESVIGTSGSIVETFESKPEFGDDKEQENEYGIKSSLRKPSLRSGASEEKHVKKVQWMDFSGKEL
        IHCPSSLCLC+PS HI+STGSV  +L+NSPHLPS    VI TSGS VET E K     DK  E+E+G KSSLRKP+ RSG S+EKHVK VQWMDFSGKEL
Subjt:  IHCPSSLCLCKPSSHIYSTGSVPPNLENSPHLPSEVESVIGTSGSIVETFESKPEFGDDKEQENEYGIKSSLRKPSLRSGASEEKHVKKVQWMDFSGKEL

Query:  VEIREFEPSEVEDSDYEDEDNRSCICTIL
         EIREFE SE EDSDYEDEDN SCICTIL
Subjt:  VEIREFEPSEVEDSDYEDEDNRSCICTIL

A0A6J1HTN7 uncharacterized protein LOC1114677184.5e-4173.64Show/hide
Query:  IHCPSSLCLCKPSSHIYSTGSVPPNLENSPHLPSEVESVIGTSGSIVETFESKPEFGDDKEQENEYGIKSSLRKPSLRSGASEEKHVKKVQWMDFSGKEL
        IHCPSSLCLC+PS HI+STGSV  +L+NSPHLPS    VIGTSGS VET E K     DK  E+E+G KSSLRK + RSG S+EKHVK VQWMDFSGKEL
Subjt:  IHCPSSLCLCKPSSHIYSTGSVPPNLENSPHLPSEVESVIGTSGSIVETFESKPEFGDDKEQENEYGIKSSLRKPSLRSGASEEKHVKKVQWMDFSGKEL

Query:  VEIREFEPSEVEDSDYEDEDNRSCICTIL
         EIREFE SE EDSDYEDEDN SCICTIL
Subjt:  VEIREFEPSEVEDSDYEDEDNRSCICTIL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G22790.1 unknown protein2.5e-0432.65Show/hide
Query:  SKPEFGDDKEQENEYGIKSSLRKPSLRSGASEE------------------KHVKKVQWMDFSGKELVEIREFEPSE--VEDSDYEDEDNRSCICTIL
        S+ + G  KE   +  ++SSL++PS+    S E                     +KVQW D  G EL ++REFEPSE  + D ++E    R+C C I+
Subjt:  SKPEFGDDKEQENEYGIKSSLRKPSLRSGASEE------------------KHVKKVQWMDFSGKELVEIREFEPSE--VEDSDYEDEDNRSCICTIL

AT1G34010.1 unknown protein8.4e-0839.02Show/hide
Query:  EQENEYGIKSSLRKPSL-----------RSGASEEKHVKKVQWMDFSGKELVEIREFEPSEVEDS--DYEDEDNRSCICTIL
        E  N + +KSSL+K S            R G  +    +KVQW D  G E+ E+REFEPSEV++S  ++     +SC+CTI+
Subjt:  EQENEYGIKSSLRKPSL-----------RSGASEEKHVKKVQWMDFSGKELVEIREFEPSEVEDS--DYEDEDNRSCICTIL

AT1G55475.1 unknown protein4.0e-1046.75Show/hide
Query:  DDKEQENE-----YGIKSSLRKPSLRSGASEEKHVKKVQWMDFSGKELVEIREFEPSEVEDSDYEDEDNRSCICTIL
        D KE+E +       +KSSLRK    S  +E++  KKVQW+D  GKEL EIREFEPS+ +D D   +  ++C+C IL
Subjt:  DDKEQENE-----YGIKSSLRKPSLRSGASEEKHVKKVQWMDFSGKELVEIREFEPSEVEDSDYEDEDNRSCICTIL

AT2G33390.1 unknown protein7.9e-0640Show/hide
Query:  SIVETFESKPEFGDDKEQENEYGIKSSLRKPSLRSGASEEKHVKKVQWMDFSGKELVEIREFEPSEVEDSDYEDEDNRSCICTIL
        +IV    S+ E    +E+E+E       RK  +    S +K  + VQW D  G  L E+  +EPSEV  SD ED+D+ SCICTI+
Subjt:  SIVETFESKPEFGDDKEQENEYGIKSSLRKPSLRSGASEEKHVKKVQWMDFSGKELVEIREFEPSEVEDSDYEDEDNRSCICTIL

AT3G13480.1 unknown protein2.9e-1636.71Show/hide
Query:  LSGIHCPSSLCLCKPSSHIYSTGSV---------------------PPNLENSPHLPSEVESVIGTSGSIVETFESKPEFGDDKEQENE-----YGIKSS
        L  I CPS +C CKPS HIY++GS+                       N ++  H+  E   V    G + E    +    + K++E E       +KSS
Subjt:  LSGIHCPSSLCLCKPSSHIYSTGSV---------------------PPNLENSPHLPSEVESVIGTSGSIVETFESKPEFGDDKEQENE-----YGIKSS

Query:  LRKPSLRSGASEEKHVKKVQWMDFSGKELVEIREFEPSEVEDSDYEDEDNRSCICTIL
        L+K  L S     K  KKVQW+D  GKEL EIREFE SE ED  Y+ +  +SC+C IL
Subjt:  LRKPSLRSGASEEKHVKKVQWMDFSGKELVEIREFEPSEVEDSDYEDEDNRSCICTIL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTTCTTCTTCAGTCGGCATAATTCCATTTCAATCCGCTTCCCATTTCTCTGCAACTTCAAATCTCAGTCGCCCATTCAGTTATTTCACTTTCTTCCATCGCAATCT
CGTTCTTCAATTTGGGCAACGGATGATGAAATCCAGAGCAAGAAAGATAGGATTTGCTTTGAAGCTATTTCTCTTCTGTGATTCGTCTCTTTTGGCAGGGGAGTTTGATT
TTGTTACATTTGTTCATGTTTTGAACTGGGATTGTCTTTCTTTATCTGGGATTCACTGTCCTTCATCCCTTTGCCTCTGTAAACCTTCCTCTCATATATATTCCACTGGA
TCAGTGCCACCGAATTTGGAAAACTCACCACATTTGCCTTCAGAAGTTGAGTCAGTCATTGGAACTTCTGGTTCCATTGTTGAGACCTTTGAATCCAAGCCAGAGTTCGG
AGATGACAAAGAGCAGGAGAATGAGTATGGAATCAAGAGTAGTCTAAGGAAGCCAAGTTTGCGGTCAGGTGCGTCGGAGGAGAAGCATGTGAAAAAAGTACAATGGATGG
ATTTTTCAGGCAAAGAACTCGTTGAGATCAGGGAATTTGAACCTAGTGAAGTTGAAGATTCTGATTATGAAGATGAGGATAACAGAAGCTGCATCTGTACTATTTTATGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTTCTTCTTCAGTCGGCATAATTCCATTTCAATCCGCTTCCCATTTCTCTGCAACTTCAAATCTCAGTCGCCCATTCAGTTATTTCACTTTCTTCCATCGCAATCT
CGTTCTTCAATTTGGGCAACGGATGATGAAATCCAGAGCAAGAAAGATAGGATTTGCTTTGAAGCTATTTCTCTTCTGTGATTCGTCTCTTTTGGCAGGGGAGTTTGATT
TTGTTACATTTGTTCATGTTTTGAACTGGGATTGTCTTTCTTTATCTGGGATTCACTGTCCTTCATCCCTTTGCCTCTGTAAACCTTCCTCTCATATATATTCCACTGGA
TCAGTGCCACCGAATTTGGAAAACTCACCACATTTGCCTTCAGAAGTTGAGTCAGTCATTGGAACTTCTGGTTCCATTGTTGAGACCTTTGAATCCAAGCCAGAGTTCGG
AGATGACAAAGAGCAGGAGAATGAGTATGGAATCAAGAGTAGTCTAAGGAAGCCAAGTTTGCGGTCAGGTGCGTCGGAGGAGAAGCATGTGAAAAAAGTACAATGGATGG
ATTTTTCAGGCAAAGAACTCGTTGAGATCAGGGAATTTGAACCTAGTGAAGTTGAAGATTCTGATTATGAAGATGAGGATAACAGAAGCTGCATCTGTACTATTTTATGA
Protein sequenceShow/hide protein sequence
MPSSSVGIIPFQSASHFSATSNLSRPFSYFTFFHRNLVLQFGQRMMKSRARKIGFALKLFLFCDSSLLAGEFDFVTFVHVLNWDCLSLSGIHCPSSLCLCKPSSHIYSTG
SVPPNLENSPHLPSEVESVIGTSGSIVETFESKPEFGDDKEQENEYGIKSSLRKPSLRSGASEEKHVKKVQWMDFSGKELVEIREFEPSEVEDSDYEDEDNRSCICTIL