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Lag0034753 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0034753
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionSynaptojanin-1
Genome locationchr3:10452737..10453388
RNA-Seq ExpressionLag0034753
SyntenyLag0034753
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039065.1 synaptojanin-1 [Cucumis melo var. makuwa]1.8e-1781.36Show/hide
Query:  GERGEKNLPLQQRREVAQSGDSSGFLCGECSIAFCRVRKKLNFKCLFVLILGFVVFVPG
        G+  E+NLPLQQRREVA SGDSSGFLCG+CSIAF RV K+LNFKC FVL+LGFVVFVPG
Subjt:  GERGEKNLPLQQRREVAQSGDSSGFLCGECSIAFCRVRKKLNFKCLFVLILGFVVFVPG

XP_004149972.2 uncharacterized protein LOC101222031 isoform X2 [Cucumis sativus]8.2e-1880Show/hide
Query:  GERGEKNLPLQQRREVAQSGDSSGFLCGECSIAFCRVRKKLNFKCLFVLILGFVVFVPGF
        G+  E+NLPLQQRREVA +GDSSGFLCG+CSIAF RV K+LNFKC FVL+LGFVVFVPGF
Subjt:  GERGEKNLPLQQRREVAQSGDSSGFLCGECSIAFCRVRKKLNFKCLFVLILGFVVFVPGF

XP_008456084.1 PREDICTED: uncharacterized protein LOC103496125 isoform X1 [Cucumis melo]1.8e-1781.36Show/hide
Query:  GERGEKNLPLQQRREVAQSGDSSGFLCGECSIAFCRVRKKLNFKCLFVLILGFVVFVPG
        G+  E+NLPLQQRREVA SGDSSGFLCG+CSIAF RV K+LNFKC FVL+LGFVVFVPG
Subjt:  GERGEKNLPLQQRREVAQSGDSSGFLCGECSIAFCRVRKKLNFKCLFVLILGFVVFVPG

XP_011651267.1 uncharacterized protein LOC101222031 isoform X1 [Cucumis sativus]8.2e-1880Show/hide
Query:  GERGEKNLPLQQRREVAQSGDSSGFLCGECSIAFCRVRKKLNFKCLFVLILGFVVFVPGF
        G+  E+NLPLQQRREVA +GDSSGFLCG+CSIAF RV K+LNFKC FVL+LGFVVFVPGF
Subjt:  GERGEKNLPLQQRREVAQSGDSSGFLCGECSIAFCRVRKKLNFKCLFVLILGFVVFVPGF

XP_016901918.1 PREDICTED: uncharacterized protein LOC103496125 isoform X2 [Cucumis melo]1.8e-1781.36Show/hide
Query:  GERGEKNLPLQQRREVAQSGDSSGFLCGECSIAFCRVRKKLNFKCLFVLILGFVVFVPG
        G+  E+NLPLQQRREVA SGDSSGFLCG+CSIAF RV K+LNFKC FVL+LGFVVFVPG
Subjt:  GERGEKNLPLQQRREVAQSGDSSGFLCGECSIAFCRVRKKLNFKCLFVLILGFVVFVPG

TrEMBL top hitse value%identityAlignment
A0A0A0L6J0 Uncharacterized protein4.0e-1880Show/hide
Query:  GERGEKNLPLQQRREVAQSGDSSGFLCGECSIAFCRVRKKLNFKCLFVLILGFVVFVPGF
        G+  E+NLPLQQRREVA +GDSSGFLCG+CSIAF RV K+LNFKC FVL+LGFVVFVPGF
Subjt:  GERGEKNLPLQQRREVAQSGDSSGFLCGECSIAFCRVRKKLNFKCLFVLILGFVVFVPGF

A0A1S3C2E0 uncharacterized protein LOC103496125 isoform X18.8e-1881.36Show/hide
Query:  GERGEKNLPLQQRREVAQSGDSSGFLCGECSIAFCRVRKKLNFKCLFVLILGFVVFVPG
        G+  E+NLPLQQRREVA SGDSSGFLCG+CSIAF RV K+LNFKC FVL+LGFVVFVPG
Subjt:  GERGEKNLPLQQRREVAQSGDSSGFLCGECSIAFCRVRKKLNFKCLFVLILGFVVFVPG

A0A1S4E116 uncharacterized protein LOC103496125 isoform X28.8e-1881.36Show/hide
Query:  GERGEKNLPLQQRREVAQSGDSSGFLCGECSIAFCRVRKKLNFKCLFVLILGFVVFVPG
        G+  E+NLPLQQRREVA SGDSSGFLCG+CSIAF RV K+LNFKC FVL+LGFVVFVPG
Subjt:  GERGEKNLPLQQRREVAQSGDSSGFLCGECSIAFCRVRKKLNFKCLFVLILGFVVFVPG

A0A5A7TCD6 Synaptojanin-18.8e-1881.36Show/hide
Query:  GERGEKNLPLQQRREVAQSGDSSGFLCGECSIAFCRVRKKLNFKCLFVLILGFVVFVPG
        G+  E+NLPLQQRREVA SGDSSGFLCG+CSIAF RV K+LNFKC FVL+LGFVVFVPG
Subjt:  GERGEKNLPLQQRREVAQSGDSSGFLCGECSIAFCRVRKKLNFKCLFVLILGFVVFVPG

A0A6J1D566 uncharacterized protein LOC1110177071.2e-1776.67Show/hide
Query:  GERGEKNLPLQQRREVAQSGDSSGFLCGECSIAFCRVRKKLNFKCLFVLILGFVVFVPGF
        G+  E+NLP+Q+RREVA SGDSSGFLCG+CSIA  RVR++LNFKC+FVLILGF+VFVPGF
Subjt:  GERGEKNLPLQQRREVAQSGDSSGFLCGECSIAFCRVRKKLNFKCLFVLILGFVVFVPGF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCAACGAGAGTGATTACAGATGCTCTGCAAATGGGGAAAGGGGAGAGAAAAATCTGCCACTGCAGCAGCGTCGGGAGGTGGCTCAGAGTGGCGACTCTTCT
GGGTTTCTGTGTGGTGAATGTTCGATTGCTTTTTGTAGAGTTCGTAAGAAGTTGAATTTCAAGTGTTTGTTCGTTTTGATTTTGGGGTTTGTGGTGTTTGTCCCT
GGATTTCCGGCGCCGGCCCCAACCTCTCGGTCCCACACACGACCAGATTATCACCTTCCTTCTTCAGAGCTTCGCTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGCAACGAGAGTGATTACAGATGCTCTGCAAATGGGGAAAGGGGAGAGAAAAATCTGCCACTGCAGCAGCGTCGGGAGGTGGCTCAGAGTGGCGACTCTTCT
GGGTTTCTGTGTGGTGAATGTTCGATTGCTTTTTGTAGAGTTCGTAAGAAGTTGAATTTCAAGTGTTTGTTCGTTTTGATTTTGGGGTTTGTGGTGTTTGTCCCT
GGATTTCCGGCGCCGGCCCCAACCTCTCGGTCCCACACACGACCAGATTATCACCTTCCTTCTTCAGAGCTTCGCTCTTGA
Protein sequenceShow/hide protein sequence
MCNESDYRCSANGERGEKNLPLQQRREVAQSGDSSGFLCGECSIAFCRVRKKLNFKCLFVLILGFVVFVPGFPAPAPTSRSHTRPDYHLPSSELRS