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Lag0034754 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0034754
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr3:10454504..10454812
RNA-Seq ExpressionLag0034754
SyntenyLag0034754
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599977.1 hypothetical protein SDJN03_05210, partial [Cucurbita argyrosperma subsp. sororia]9.3e-0438.6Show/hide
Query:  MNIDASWLKDRKVGGIGWIVRDSSGFLIGIDSKHMTINWGIKNLEANAILKGAKAYL
        +N  ASW ++   GG+ W++ DS G  I I+ K +   W +K LE  A+++G K YL
Subjt:  MNIDASWLKDRKVGGIGWIVRDSSGFLIGIDSKHMTINWGIKNLEANAILKGAKAYL

XP_013632606.1 PREDICTED: uncharacterized protein LOC106338098 [Brassica oleracea var. oleracea]4.2e-0432.18Show/hide
Query:  NIDASWLKDRKVGGIGWIVRDSSGFLIGIDSKHMTINWGIKNLEANAILKGAKAYLNWCSRYFSGF-KSPLAVETDAHVVVRAISSE
        N DASW K+  +GG+GWI+RD  G L+   ++ + +   +   EA AI        +W  +   GF    + +ETD+ V+ R ++ E
Subjt:  NIDASWLKDRKVGGIGWIVRDSSGFLIGIDSKHMTINWGIKNLEANAILKGAKAYLNWCSRYFSGF-KSPLAVETDAHVVVRAISSE

XP_013694754.1 uncharacterized protein LOC106398790 [Brassica napus]7.2e-0429.89Show/hide
Query:  NIDASWLKDRKVGGIGWIVRDSSGFLIGIDSKHMTINWGIKNLEANAILKGAKAYLNWCSRYFSGF-KSPLAVETDAHVVVRAISSE
        N DA+W+++ +VGG+GW++RD +G ++   +K +     +   E  A        L W  R  +GF    +  E+D+ V+VR +++E
Subjt:  NIDASWLKDRKVGGIGWIVRDSSGFLIGIDSKHMTINWGIKNLEANAILKGAKAYLNWCSRYFSGF-KSPLAVETDAHVVVRAISSE

XP_022143317.1 uncharacterized protein LOC111013216 [Momordica charantia]4.2e-0433.7Show/hide
Query:  MNIDASWLKDRKVGGIGWIVRDSSGFLIGIDSKHMTINWGIKNLEANAILKGAKAYLNWCSRYFSGFKSPLAVETDAHVVVRAISSEAINLS
        +N DASW ++R+VGGIGWI+ D  G ++   +  +     I  LE   I++G + ++N  SR      SP+ +E+D+  V+R +  E ++L+
Subjt:  MNIDASWLKDRKVGGIGWIVRDSSGFLIGIDSKHMTINWGIKNLEANAILKGAKAYLNWCSRYFSGFKSPLAVETDAHVVVRAISSEAINLS

TrEMBL top hitse value%identityAlignment
A0A6J1CQG0 uncharacterized protein LOC1110132162.0e-0433.7Show/hide
Query:  MNIDASWLKDRKVGGIGWIVRDSSGFLIGIDSKHMTINWGIKNLEANAILKGAKAYLNWCSRYFSGFKSPLAVETDAHVVVRAISSEAINLS
        +N DASW ++R+VGGIGWI+ D  G ++   +  +     I  LE   I++G + ++N  SR      SP+ +E+D+  V+R +  E ++L+
Subjt:  MNIDASWLKDRKVGGIGWIVRDSSGFLIGIDSKHMTINWGIKNLEANAILKGAKAYLNWCSRYFSGFKSPLAVETDAHVVVRAISSEAINLS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACATTGATGCTTCGTGGCTTAAAGATCGAAAAGTGGGAGGGATTGGTTGGATAGTTCGTGACTCTTCAGGATTTCTGATTGGAATCGACAGCAAACACATGACAAT
AAATTGGGGGATCAAGAACCTTGAAGCGAATGCAATTCTAAAGGGGGCGAAAGCTTATCTTAATTGGTGCTCCCGCTATTTCAGTGGTTTCAAGTCTCCTTTGGCGGTAG
AGACAGATGCGCATGTTGTGGTCAGGGCCATCTCCAGCGAGGCGATCAATCTCTCGGAGCTATCCATGATTACCTCTACCATCCGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAACATTGATGCTTCGTGGCTTAAAGATCGAAAAGTGGGAGGGATTGGTTGGATAGTTCGTGACTCTTCAGGATTTCTGATTGGAATCGACAGCAAACACATGACAAT
AAATTGGGGGATCAAGAACCTTGAAGCGAATGCAATTCTAAAGGGGGCGAAAGCTTATCTTAATTGGTGCTCCCGCTATTTCAGTGGTTTCAAGTCTCCTTTGGCGGTAG
AGACAGATGCGCATGTTGTGGTCAGGGCCATCTCCAGCGAGGCGATCAATCTCTCGGAGCTATCCATGATTACCTCTACCATCCGTTAA
Protein sequenceShow/hide protein sequence
MNIDASWLKDRKVGGIGWIVRDSSGFLIGIDSKHMTINWGIKNLEANAILKGAKAYLNWCSRYFSGFKSPLAVETDAHVVVRAISSEAINLSELSMITSTIR