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Lag0034805 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0034805
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionethylene-responsive transcription factor RAP2-12-like
Genome locationchr3:11019595..11021351
RNA-Seq ExpressionLag0034805
SyntenyLag0034805
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009873 - ethylene-activated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593578.1 Ethylene-responsive transcription factor RAP2-12, partial [Cucurbita argyrosperma subsp. sororia]5.8e-0878.05Show/hide
Query:  HFKDDSDLELDEEELVEVKPFAFSAGGNPAVPSARVERFVE
        HFKD+SDLELD+ ELV+VKPFAFSAG NP+VPSARV + VE
Subjt:  HFKDDSDLELDEEELVEVKPFAFSAGGNPAVPSARVERFVE

KAG7013959.1 Ethylene-responsive transcription factor RAP2-12 [Cucurbita argyrosperma subsp. argyrosperma]1.3e-0778.05Show/hide
Query:  HFKDDSDLELDEEELVEVKPFAFSAGGNPAVPSARVERFVE
        HFKDDSDLE D EELV+VK FAFSAGG+PAVPSAR  + VE
Subjt:  HFKDDSDLELDEEELVEVKPFAFSAGGNPAVPSARVERFVE

KAG7025922.1 Ethylene-responsive transcription factor RAP2-12 [Cucurbita argyrosperma subsp. argyrosperma]5.8e-0878.05Show/hide
Query:  HFKDDSDLELDEEELVEVKPFAFSAGGNPAVPSARVERFVE
        HFKD+SDLELD+ ELV+VKPFAFSAG NP+VPSARV + VE
Subjt:  HFKDDSDLELDEEELVEVKPFAFSAGGNPAVPSARVERFVE

XP_022992282.1 ethylene-responsive transcription factor RAP2-12-like [Cucurbita maxima]1.3e-0778.05Show/hide
Query:  HFKDDSDLELDEEELVEVKPFAFSAGGNPAVPSARVERFVE
        HFKDDSDLE D EELV+VK FAFSAGG+PAVPSAR  + VE
Subjt:  HFKDDSDLELDEEELVEVKPFAFSAGGNPAVPSARVERFVE

XP_023548217.1 ethylene-responsive transcription factor RAP2-12-like [Cucurbita pepo subsp. pepo]1.3e-0778.05Show/hide
Query:  HFKDDSDLELDEEELVEVKPFAFSAGGNPAVPSARVERFVE
        HFKDDSDLE D EELV+VK FAFSAGG+PAVPSAR  + VE
Subjt:  HFKDDSDLELDEEELVEVKPFAFSAGGNPAVPSARVERFVE

TrEMBL top hitse value%identityAlignment
A0A5A7UTW2 Ethylene-responsive transcription factor RAP2-12-like1.2e-0670.73Show/hide
Query:  HFKDDSDLELDEEELVEVKPFAFSAGGNPAVPSARVERFVE
        HFKDDSDLE D EEL++ KP AFSA GNP VPSAR  + VE
Subjt:  HFKDDSDLELDEEELVEVKPFAFSAGGNPAVPSARVERFVE

A0A6J1GQP0 ethylene-responsive transcription factor RAP2-12-like1.4e-0775.61Show/hide
Query:  HFKDDSDLELDEEELVEVKPFAFSAGGNPAVPSARVERFVE
        HFKDDSDLE D EELV+VK FAFSAGG+PAVPSAR  + V+
Subjt:  HFKDDSDLELDEEELVEVKPFAFSAGGNPAVPSARVERFVE

A0A6J1HJP5 ethylene-responsive transcription factor RAP2-12-like8.2e-0875.61Show/hide
Query:  HFKDDSDLELDEEELVEVKPFAFSAGGNPAVPSARVERFVE
        HFKD+SDLELD+ ELV+VKPFAFSAG NP+VPSAR  + VE
Subjt:  HFKDDSDLELDEEELVEVKPFAFSAGGNPAVPSARVERFVE

A0A6J1JPD1 ethylene-responsive transcription factor RAP2-12-like6.3e-0878.05Show/hide
Query:  HFKDDSDLELDEEELVEVKPFAFSAGGNPAVPSARVERFVE
        HFKDDSDLE D EELV+VK FAFSAGG+PAVPSAR  + VE
Subjt:  HFKDDSDLELDEEELVEVKPFAFSAGGNPAVPSARVERFVE

A0A6J1KFD0 ethylene-responsive transcription factor RAP2-12-like8.2e-0875.61Show/hide
Query:  HFKDDSDLELDEEELVEVKPFAFSAGGNPAVPSARVERFVE
        HFKD+SDLELD+ ELV+VKPFAFSAG NP+VPSAR  + VE
Subjt:  HFKDDSDLELDEEELVEVKPFAFSAGGNPAVPSARVERFVE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCCGCCGCTGCTCTCCAACACCACCATCACTTTCTTATTCTTCTTCAACAAAACACTCTCTCTCTTTCCCCTTCCCCTCTCCGTGCCCCTCCGACGCCGCACTT
TAAGGACGATTCCGATTTGGAATTGGATGAGGAAGAGCTCGTCGAGGTCAAACCCTTTGCCTTCTCTGCTGGTGGAAACCCTGCCGTTCCTTCTGCTCGTGTTGAACGTT
TTGTTGAAGAAGAGGAGGTGGGTTTTGTTGAAGAAGAAGAAGAAAGTGGTCATTGCCAGCGAGAAGGACTGAAGGAGATGTCTAGGGTATGTGTGATACCATTTGGTATG
GCAAGATTGAGGGTACTCTGGAGAAAAGTCTCGATATGCGATTGTAAGATAACATGCTCTATCTGGTTTTCATCGCTTCCCTACTTATGTTACTTCTTCCTCTTGACAGA
ATTGAAGGACATGTCTGAGATACGTGGGACAACATTTGCGACAGCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCCGCCGCTGCTCTCCAACACCACCATCACTTTCTTATTCTTCTTCAACAAAACACTCTCTCTCTTTCCCCTTCCCCTCTCCGTGCCCCTCCGACGCCGCACTT
TAAGGACGATTCCGATTTGGAATTGGATGAGGAAGAGCTCGTCGAGGTCAAACCCTTTGCCTTCTCTGCTGGTGGAAACCCTGCCGTTCCTTCTGCTCGTGTTGAACGTT
TTGTTGAAGAAGAGGAGGTGGGTTTTGTTGAAGAAGAAGAAGAAAGTGGTCATTGCCAGCGAGAAGGACTGAAGGAGATGTCTAGGGTATGTGTGATACCATTTGGTATG
GCAAGATTGAGGGTACTCTGGAGAAAAGTCTCGATATGCGATTGTAAGATAACATGCTCTATCTGGTTTTCATCGCTTCCCTACTTATGTTACTTCTTCCTCTTGACAGA
ATTGAAGGACATGTCTGAGATACGTGGGACAACATTTGCGACAGCATGA
Protein sequenceShow/hide protein sequence
MAAAAALQHHHHFLILLQQNTLSLSPSPLRAPPTPHFKDDSDLELDEEELVEVKPFAFSAGGNPAVPSARVERFVEEEEVGFVEEEEESGHCQREGLKEMSRVCVIPFGM
ARLRVLWRKVSICDCKITCSIWFSSLPYLCYFFLLTELKDMSEIRGTTFATA