; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0034806 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0034806
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionzinc finger BED domain-containing protein DAYSLEEPER-like
Genome locationchr3:11023730..11024293
RNA-Seq ExpressionLag0034806
SyntenyLag0034806
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily
IPR025525 - hAT-like transposase, RNase-H fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011655412.1 zinc finger BED domain-containing protein DAYSLEEPER isoform X1 [Cucumis sativus]1.0e-1945.9Show/hide
Query:  MLMATLEVRACFDIVMDIDEAVKD-PSEDDWKKIEVLCKYLKFLLDAATVFSTTTSAHAATVFERIWNILSDLCVASANEDSFMSHLTKTLREALEKHLK
        ML+A  E++  F  +   D   ++ PS +DWK +E+LC YLK L DAA + +TTT   A TVF  +W I S+L  A  NED F+S L+K + E  +K+ K
Subjt:  MLMATLEVRACFDIVMDIDEAVKD-PSEDDWKKIEVLCKYLKFLLDAATVFSTTTSAHAATVFERIWNILSDLCVASANEDSFMSHLTKTLREALEKHLK

Query:  DYNIVLRASIAMDPRSKMRMVE
        D +IVL A++ MDPR KM++VE
Subjt:  DYNIVLRASIAMDPRSKMRMVE

XP_011655416.1 zinc finger BED domain-containing protein DAYSLEEPER isoform X2 [Cucumis sativus]1.0e-1945.9Show/hide
Query:  MLMATLEVRACFDIVMDIDEAVKD-PSEDDWKKIEVLCKYLKFLLDAATVFSTTTSAHAATVFERIWNILSDLCVASANEDSFMSHLTKTLREALEKHLK
        ML+A  E++  F  +   D   ++ PS +DWK +E+LC YLK L DAA + +TTT   A TVF  +W I S+L  A  NED F+S L+K + E  +K+ K
Subjt:  MLMATLEVRACFDIVMDIDEAVKD-PSEDDWKKIEVLCKYLKFLLDAATVFSTTTSAHAATVFERIWNILSDLCVASANEDSFMSHLTKTLREALEKHLK

Query:  DYNIVLRASIAMDPRSKMRMVE
        D +IVL A++ MDPR KM++VE
Subjt:  DYNIVLRASIAMDPRSKMRMVE

XP_011655423.1 zinc finger BED domain-containing protein DAYSLEEPER isoform X3 [Cucumis sativus]1.0e-1945.9Show/hide
Query:  MLMATLEVRACFDIVMDIDEAVKD-PSEDDWKKIEVLCKYLKFLLDAATVFSTTTSAHAATVFERIWNILSDLCVASANEDSFMSHLTKTLREALEKHLK
        ML+A  E++  F  +   D   ++ PS +DWK +E+LC YLK L DAA + +TTT   A TVF  +W I S+L  A  NED F+S L+K + E  +K+ K
Subjt:  MLMATLEVRACFDIVMDIDEAVKD-PSEDDWKKIEVLCKYLKFLLDAATVFSTTTSAHAATVFERIWNILSDLCVASANEDSFMSHLTKTLREALEKHLK

Query:  DYNIVLRASIAMDPRSKMRMVE
        D +IVL A++ MDPR KM++VE
Subjt:  DYNIVLRASIAMDPRSKMRMVE

XP_016899814.1 PREDICTED: zinc finger BED domain-containing protein DAYSLEEPER-like isoform X1 [Cucumis melo]1.0e-1945.9Show/hide
Query:  MLMATLEVRACFDIVMDIDEAVKD-PSEDDWKKIEVLCKYLKFLLDAATVFSTTTSAHAATVFERIWNILSDLCVASANEDSFMSHLTKTLREALEKHLK
        ML+A  E++  F  +   D   ++ PS +DWK +E+LC YLK L DAA + +TTT   A TVF  +W I S+L  A  NED F+S L+K + E  +K+ K
Subjt:  MLMATLEVRACFDIVMDIDEAVKD-PSEDDWKKIEVLCKYLKFLLDAATVFSTTTSAHAATVFERIWNILSDLCVASANEDSFMSHLTKTLREALEKHLK

Query:  DYNIVLRASIAMDPRSKMRMVE
        D +IVL A++ MDPR KM++VE
Subjt:  DYNIVLRASIAMDPRSKMRMVE

XP_016899815.1 PREDICTED: zinc finger BED domain-containing protein DAYSLEEPER-like isoform X2 [Cucumis melo]1.0e-1945.9Show/hide
Query:  MLMATLEVRACFDIVMDIDEAVKD-PSEDDWKKIEVLCKYLKFLLDAATVFSTTTSAHAATVFERIWNILSDLCVASANEDSFMSHLTKTLREALEKHLK
        ML+A  E++  F  +   D   ++ PS +DWK +E+LC YLK L DAA + +TTT   A TVF  +W I S+L  A  NED F+S L+K + E  +K+ K
Subjt:  MLMATLEVRACFDIVMDIDEAVKD-PSEDDWKKIEVLCKYLKFLLDAATVFSTTTSAHAATVFERIWNILSDLCVASANEDSFMSHLTKTLREALEKHLK

Query:  DYNIVLRASIAMDPRSKMRMVE
        D +IVL A++ MDPR KM++VE
Subjt:  DYNIVLRASIAMDPRSKMRMVE

TrEMBL top hitse value%identityAlignment
A0A0A0LYS2 BED-type domain-containing protein4.8e-2045.9Show/hide
Query:  MLMATLEVRACFDIVMDIDEAVKD-PSEDDWKKIEVLCKYLKFLLDAATVFSTTTSAHAATVFERIWNILSDLCVASANEDSFMSHLTKTLREALEKHLK
        ML+A  E++  F  +   D   ++ PS +DWK +E+LC YLK L DAA + +TTT   A TVF  +W I S+L  A  NED F+S L+K + E  +K+ K
Subjt:  MLMATLEVRACFDIVMDIDEAVKD-PSEDDWKKIEVLCKYLKFLLDAATVFSTTTSAHAATVFERIWNILSDLCVASANEDSFMSHLTKTLREALEKHLK

Query:  DYNIVLRASIAMDPRSKMRMVE
        D +IVL A++ MDPR KM++VE
Subjt:  DYNIVLRASIAMDPRSKMRMVE

A0A1S4DV03 zinc finger BED domain-containing protein DAYSLEEPER-like isoform X14.8e-2045.9Show/hide
Query:  MLMATLEVRACFDIVMDIDEAVKD-PSEDDWKKIEVLCKYLKFLLDAATVFSTTTSAHAATVFERIWNILSDLCVASANEDSFMSHLTKTLREALEKHLK
        ML+A  E++  F  +   D   ++ PS +DWK +E+LC YLK L DAA + +TTT   A TVF  +W I S+L  A  NED F+S L+K + E  +K+ K
Subjt:  MLMATLEVRACFDIVMDIDEAVKD-PSEDDWKKIEVLCKYLKFLLDAATVFSTTTSAHAATVFERIWNILSDLCVASANEDSFMSHLTKTLREALEKHLK

Query:  DYNIVLRASIAMDPRSKMRMVE
        D +IVL A++ MDPR KM++VE
Subjt:  DYNIVLRASIAMDPRSKMRMVE

A0A1S4DVS1 zinc finger BED domain-containing protein DAYSLEEPER-like isoform X24.8e-2045.9Show/hide
Query:  MLMATLEVRACFDIVMDIDEAVKD-PSEDDWKKIEVLCKYLKFLLDAATVFSTTTSAHAATVFERIWNILSDLCVASANEDSFMSHLTKTLREALEKHLK
        ML+A  E++  F  +   D   ++ PS +DWK +E+LC YLK L DAA + +TTT   A TVF  +W I S+L  A  NED F+S L+K + E  +K+ K
Subjt:  MLMATLEVRACFDIVMDIDEAVKD-PSEDDWKKIEVLCKYLKFLLDAATVFSTTTSAHAATVFERIWNILSDLCVASANEDSFMSHLTKTLREALEKHLK

Query:  DYNIVLRASIAMDPRSKMRMVE
        D +IVL A++ MDPR KM++VE
Subjt:  DYNIVLRASIAMDPRSKMRMVE

A0A5D3C4S1 Zinc finger BED domain-containing protein DAYSLEEPER-like isoform X24.8e-2045.9Show/hide
Query:  MLMATLEVRACFDIVMDIDEAVKD-PSEDDWKKIEVLCKYLKFLLDAATVFSTTTSAHAATVFERIWNILSDLCVASANEDSFMSHLTKTLREALEKHLK
        ML+A  E++  F  +   D   ++ PS +DWK +E+LC YLK L DAA + +TTT   A TVF  +W I S+L  A  NED F+S L+K + E  +K+ K
Subjt:  MLMATLEVRACFDIVMDIDEAVKD-PSEDDWKKIEVLCKYLKFLLDAATVFSTTTSAHAATVFERIWNILSDLCVASANEDSFMSHLTKTLREALEKHLK

Query:  DYNIVLRASIAMDPRSKMRMVE
        D +IVL A++ MDPR KM++VE
Subjt:  DYNIVLRASIAMDPRSKMRMVE

A0A6J1HK33 zinc finger BED domain-containing protein DAYSLEEPER-like isoform X21.1e-1945.08Show/hide
Query:  MLMATLEVRACFDIVMDIDEAVKD-PSEDDWKKIEVLCKYLKFLLDAATVFSTTTSAHAATVFERIWNILSDLCVASANEDSFMSHLTKTLREALEKHLK
        ML+A  E++  F  +   D   K+ PS +DWK +E+LC YLK L DAA + +TTT   A TVF  +W I S+L  A  +ED F+S+L+K + E  +K+ K
Subjt:  MLMATLEVRACFDIVMDIDEAVKD-PSEDDWKKIEVLCKYLKFLLDAATVFSTTTSAHAATVFERIWNILSDLCVASANEDSFMSHLTKTLREALEKHLK

Query:  DYNIVLRASIAMDPRSKMRMVE
        D ++VL A++ MDPR KM++VE
Subjt:  DYNIVLRASIAMDPRSKMRMVE

SwissProt top hitse value%identityAlignment
B9FJG3 Zinc finger BED domain-containing protein RICESLEEPER 11.6e-1535.25Show/hide
Query:  MLMATLEVRACFDIVMDIDEAVKD-PSEDDWKKIEVLCKYLKFLLDAATVFSTTTSAHAATVFERIWNILSDLCVASANEDSFMSHLTKTLREALEKHLK
        ML+A L+ +  F  +   D+   + PS +DWKK+E  C YLK L D+A       +  +   F   W +  +L  A+  ED   S + K + E  +K+ K
Subjt:  MLMATLEVRACFDIVMDIDEAVKD-PSEDDWKKIEVLCKYLKFLLDAATVFSTTTSAHAATVFERIWNILSDLCVASANEDSFMSHLTKTLREALEKHLK

Query:  DYNIVLRASIAMDPRSKMRMVE
        D N+VL  ++ MDPR KM++VE
Subjt:  DYNIVLRASIAMDPRSKMRMVE

Q0JMB2 Zinc finger BED domain-containing protein RICESLEEPER 43.3e-1033.87Show/hide
Query:  MLMATLEVRACFDIVMD-IDEAVKDPSEDDWKKIEVLCKYLKFLLDAATVFSTTTSAH--AATVFERIWNILSDLCVASANEDSFMSHLTKTLREALEKH
        ML+A L+ R  F ++    D     PS +DWKK+E  C +LK L        +    H  A   F   W +  +L    A+ D  +  +   + E  +K+
Subjt:  MLMATLEVRACFDIVMD-IDEAVKDPSEDDWKKIEVLCKYLKFLLDAATVFSTTTSAH--AATVFERIWNILSDLCVASANEDSFMSHLTKTLREALEKH

Query:  LKDYNIVLRASIAMDPRSKMRMVE
         KD N+VL  ++AMDPR KM+MVE
Subjt:  LKDYNIVLRASIAMDPRSKMRMVE

Q6AVI0 Zinc finger BED domain-containing protein RICESLEEPER 21.2e-1535.25Show/hide
Query:  MLMATLEVRACFDIVMDIDEAVKD-PSEDDWKKIEVLCKYLKFLLDAATVFSTTTSAHAATVFERIWNILSDLCVASANEDSFMSHLTKTLREALEKHLK
        ML+A L+ +  F  +   D+   + PS +DWKK+E  C YLK L D+A       +  +   F   W +  +L  A+ +ED   S + K + E  +K+ K
Subjt:  MLMATLEVRACFDIVMDIDEAVKD-PSEDDWKKIEVLCKYLKFLLDAATVFSTTTSAHAATVFERIWNILSDLCVASANEDSFMSHLTKTLREALEKHLK

Query:  DYNIVLRASIAMDPRSKMRMVE
        D N+VL  ++ MDPR KM++VE
Subjt:  DYNIVLRASIAMDPRSKMRMVE

Q75HY5 Zinc finger BED domain-containing protein RICESLEEPER 36.5e-1435.25Show/hide
Query:  MLMATLEVRACFDIVMDIDEAVKD-PSEDDWKKIEVLCKYLKFLLDAATVFSTTTSAHAATVFERIWNILSDLCVASANEDSFMSHLTKTLREALEKHLK
        ML+A L+ +  F  +   D    + PS +DWKK+E  C YL  L D+A       +  +   F   W + S+L  A A+ED       K + E  +K+ K
Subjt:  MLMATLEVRACFDIVMDIDEAVKD-PSEDDWKKIEVLCKYLKFLLDAATVFSTTTSAHAATVFERIWNILSDLCVASANEDSFMSHLTKTLREALEKHLK

Query:  DYNIVLRASIAMDPRSKMRMVE
        D N+VL  ++ MDPR KM++VE
Subjt:  DYNIVLRASIAMDPRSKMRMVE

Q9M2N5 Zinc finger BED domain-containing protein DAYSLEEPER9.7e-1837.7Show/hide
Query:  MLMATLEVRACFDIVMDID-EAVKDPSEDDWKKIEVLCKYLKFLLDAATVFSTTTSAHAATVFERIWNILSDLCVASANEDSFMSHLTKTLREALEKHLK
        ML+A  E++  F  +   D +  K PS +DW+ +E LC +LK L +A +   +T +  A T F  +W   SDL  A A ED F++ + KT++E ++K+ +
Subjt:  MLMATLEVRACFDIVMDID-EAVKDPSEDDWKKIEVLCKYLKFLLDAATVFSTTTSAHAATVFERIWNILSDLCVASANEDSFMSHLTKTLREALEKHLK

Query:  DYNIVLRASIAMDPRSKMRMVE
        D ++VL  ++ MDPR KM++VE
Subjt:  DYNIVLRASIAMDPRSKMRMVE

Arabidopsis top hitse value%identityAlignment
AT3G42170.1 BED zinc finger ;hAT family dimerisation domain6.9e-1937.7Show/hide
Query:  MLMATLEVRACFDIVMDID-EAVKDPSEDDWKKIEVLCKYLKFLLDAATVFSTTTSAHAATVFERIWNILSDLCVASANEDSFMSHLTKTLREALEKHLK
        ML+A  E++  F  +   D +  K PS +DW+ +E LC +LK L +A +   +T +  A T F  +W   SDL  A A ED F++ + KT++E ++K+ +
Subjt:  MLMATLEVRACFDIVMDID-EAVKDPSEDDWKKIEVLCKYLKFLLDAATVFSTTTSAHAATVFERIWNILSDLCVASANEDSFMSHLTKTLREALEKHLK

Query:  DYNIVLRASIAMDPRSKMRMVE
        D ++VL  ++ MDPR KM++VE
Subjt:  DYNIVLRASIAMDPRSKMRMVE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGATGGCAACTTTGGAAGTGAGAGCATGCTTTGATATTGTTATGGATATTGATGAAGCAGTAAAAGACCCGTCAGAAGATGATTGGAAAAAAATCGAGGTTCTTTG
CAAGTACTTGAAGTTTCTATTAGATGCAGCAACTGTGTTTAGCACCACAACTAGTGCTCATGCAGCTACTGTGTTTGAACGTATATGGAACATACTTTCAGACTTGTGTG
TTGCAAGTGCAAATGAGGATAGTTTTATGAGTCACCTCACGAAAACTTTGAGGGAGGCATTGGAAAAACATTTGAAAGATTACAACATAGTTTTAAGAGCTAGCATTGCC
ATGGATCCTCGCTCCAAGATGAGGATGGTTGAATCGAATACAGTTTTGAAAAAATCGATGGTGAAAAATCCTCTAGCTACATCAAAATGGTGTTCCACAGAATTCAAAAA
CTCTTTGATGAATATGTGGAATCACTTTCATCCCCCACAGATTTTGAGGTATATGTTAGTGAGACTAGCAACGAAAAAAATCGAAGCTCGATCGATATTTGAAAGACAGT
TTGATGCCCATTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTGATGGCAACTTTGGAAGTGAGAGCATGCTTTGATATTGTTATGGATATTGATGAAGCAGTAAAAGACCCGTCAGAAGATGATTGGAAAAAAATCGAGGTTCTTTG
CAAGTACTTGAAGTTTCTATTAGATGCAGCAACTGTGTTTAGCACCACAACTAGTGCTCATGCAGCTACTGTGTTTGAACGTATATGGAACATACTTTCAGACTTGTGTG
TTGCAAGTGCAAATGAGGATAGTTTTATGAGTCACCTCACGAAAACTTTGAGGGAGGCATTGGAAAAACATTTGAAAGATTACAACATAGTTTTAAGAGCTAGCATTGCC
ATGGATCCTCGCTCCAAGATGAGGATGGTTGAATCGAATACAGTTTTGAAAAAATCGATGGTGAAAAATCCTCTAGCTACATCAAAATGGTGTTCCACAGAATTCAAAAA
CTCTTTGATGAATATGTGGAATCACTTTCATCCCCCACAGATTTTGAGGTATATGTTAGTGAGACTAGCAACGAAAAAAATCGAAGCTCGATCGATATTTGAAAGACAGT
TTGATGCCCATTAG
Protein sequenceShow/hide protein sequence
MLMATLEVRACFDIVMDIDEAVKDPSEDDWKKIEVLCKYLKFLLDAATVFSTTTSAHAATVFERIWNILSDLCVASANEDSFMSHLTKTLREALEKHLKDYNIVLRASIA
MDPRSKMRMVESNTVLKKSMVKNPLATSKWCSTEFKNSLMNMWNHFHPPQILRYMLVRLATKKIEARSIFERQFDAH