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Lag0034813 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0034813
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr3:11092962..11094080
RNA-Seq ExpressionLag0034813
SyntenyLag0034813
Gene Ontology termsGO:0071704 - organic substance metabolic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4274760.1 unnamed protein product [Prunus armeniaca]6.9e-0630.23Show/hide
Query:  EIKSDASWSSVKNLGGIGWIICDSNGSFICAGFKRIVQRWPIKCLEMKAITESLRCLLDRFDRPFPRIFVESDSTEVVAILNLESVDISEARSLAVDAEA
        ++  DA+WS+ +  GG+GW+I DS G  +CAG +  +       +E+ AI  +L    +  +     I VESDS + + +LN  +   S+   +  D   
Subjt:  EIKSDASWSSVKNLGGIGWIICDSNGSFICAGFKRIVQRWPIKCLEMKAITESLRCLLDRFDRPFPRIFVESDSTEVVAILNLESVDISEARSLAVDAEA

Query:  AAKLVGGVSFLFSRRETNLEAHYLARMAA
            +  VSF+F+ R  N  AH +A  A+
Subjt:  AAKLVGGVSFLFSRRETNLEAHYLARMAA

CAB4274761.1 unnamed protein product [Prunus armeniaca]6.9e-0630.23Show/hide
Query:  EIKSDASWSSVKNLGGIGWIICDSNGSFICAGFKRIVQRWPIKCLEMKAITESLRCLLDRFDRPFPRIFVESDSTEVVAILNLESVDISEARSLAVDAEA
        ++  DA+WS+ +  GG+GW+I DS G  +CAG +  +       +E+ AI  +L    +  +     I VESDS + + +LN  +   S+   +  D   
Subjt:  EIKSDASWSSVKNLGGIGWIICDSNGSFICAGFKRIVQRWPIKCLEMKAITESLRCLLDRFDRPFPRIFVESDSTEVVAILNLESVDISEARSLAVDAEA

Query:  AAKLVGGVSFLFSRRETNLEAHYLARMAA
            +  VSF+F+ R  N  AH +A  A+
Subjt:  AAKLVGGVSFLFSRRETNLEAHYLARMAA

XP_022143317.1 uncharacterized protein LOC111013216 [Momordica charantia]4.3e-0837.08Show/hide
Query:  EIKSDASWSSVKNLGGIGWIICDSNGSFICAGFKRIVQRWPIKCLEMKAITESLRCLLDRFDRPFPRIFVESDSTEVVAILNLESVDIS
        ++ +DASWS  + +GGIGWI+CD  G  + AG  +I ++  I  LE+  I   L+ +  +   P   I++ESDS EV+ ++  E VD++
Subjt:  EIKSDASWSSVKNLGGIGWIICDSNGSFICAGFKRIVQRWPIKCLEMKAITESLRCLLDRFDRPFPRIFVESDSTEVVAILNLESVDIS

XP_022155262.1 uncharacterized protein LOC111022403 [Momordica charantia]9.0e-0634.35Show/hide
Query:  IKSDASWSSVKNLGGIGWIICDSNGSFICAGFKRIVQRWPIKCLEMKAITESLRCLLD-RFDRPFPRIFVESDSTEVVAILNLESVDISEARSLAVDAEA
        + +DASWS   + GGIGWII   +G  + AG + +     +K LE  AI E LR L +    RP   + +E+DS EV ++LN +  D+++   +  +   
Subjt:  IKSDASWSSVKNLGGIGWIICDSNGSFICAGFKRIVQRWPIKCLEMKAITESLRCLLD-RFDRPFPRIFVESDSTEVVAILNLESVDISEARSLAVDAEA

Query:  AAKLVGGVSFLFSRRETNLEAHYLARMAAWL
               ++F    RETN  AH LA+ A+ L
Subjt:  AAKLVGGVSFLFSRRETNLEAHYLARMAAWL

XP_028960018.1 uncharacterized protein LOC114825459 [Malus domestica]3.6e-0732.28Show/hide
Query:  EIKSDASWSSVKNLGGIGWIICDSNGSFICAGFKRIVQRWPIKCLEMKAITESLR-CLLDRFDRPFPRIFVESDSTEVVAILNLESVDISEARSLAVDAE
        +I +DA+WS V    G+GW+ CD  G    AG    ++       E+ AI E+L  CLL    R F  + +ESD+  +V ++  E         L  D E
Subjt:  EIKSDASWSSVKNLGGIGWIICDSNGSFICAGFKRIVQRWPIKCLEMKAITESLR-CLLDRFDRPFPRIFVESDSTEVVAILNLESVDISEARSLAVDAE

Query:  AAAKLVGGVSFLFSRRETNLEAHYLAR
          A+ +  V F+F  RE+N  AH + +
Subjt:  AAAKLVGGVSFLFSRRETNLEAHYLAR

TrEMBL top hitse value%identityAlignment
A0A4Y1R838 Ribonuclease H-like superfamily protein4.3e-0629.69Show/hide
Query:  EIKSDASWSSVKNLGGIGWIICDSNGSFICAGFKRIVQRWPIKCLEMKAITESLRCLLDRFDRPFPRIFVESDSTEVVAILNLESVDISEARSLAVDAEA
        ++  D +W +    GG+GW++ D  G FI AG    ++       E +A+ E+L   L   +  F ++ VESDS  ++ +LN E V   E   +  D   
Subjt:  EIKSDASWSSVKNLGGIGWIICDSNGSFICAGFKRIVQRWPIKCLEMKAITESLRCLLDRFDRPFPRIFVESDSTEVVAILNLESVDISEARSLAVDAEA

Query:  AAKLVGGVSFLFSRRETNLEAHYLARMA
         +     V FL++ R+ N  AH +A  A
Subjt:  AAKLVGGVSFLFSRRETNLEAHYLARMA

A0A6J1CQG0 uncharacterized protein LOC1110132162.1e-0837.08Show/hide
Query:  EIKSDASWSSVKNLGGIGWIICDSNGSFICAGFKRIVQRWPIKCLEMKAITESLRCLLDRFDRPFPRIFVESDSTEVVAILNLESVDIS
        ++ +DASWS  + +GGIGWI+CD  G  + AG  +I ++  I  LE+  I   L+ +  +   P   I++ESDS EV+ ++  E VD++
Subjt:  EIKSDASWSSVKNLGGIGWIICDSNGSFICAGFKRIVQRWPIKCLEMKAITESLRCLLDRFDRPFPRIFVESDSTEVVAILNLESVDIS

A0A6J5UE59 Reverse transcriptase domain-containing protein3.3e-0630.23Show/hide
Query:  EIKSDASWSSVKNLGGIGWIICDSNGSFICAGFKRIVQRWPIKCLEMKAITESLRCLLDRFDRPFPRIFVESDSTEVVAILNLESVDISEARSLAVDAEA
        ++  DA+WS+ +  GG+GW+I DS G  +CAG +  +       +E+ AI  +L    +  +     I VESDS + + +LN  +   S+   +  D   
Subjt:  EIKSDASWSSVKNLGGIGWIICDSNGSFICAGFKRIVQRWPIKCLEMKAITESLRCLLDRFDRPFPRIFVESDSTEVVAILNLESVDISEARSLAVDAEA

Query:  AAKLVGGVSFLFSRRETNLEAHYLARMAA
            +  VSF+F+ R  N  AH +A  A+
Subjt:  AAKLVGGVSFLFSRRETNLEAHYLARMAA

A0A6J5UF50 Uncharacterized protein3.3e-0630.23Show/hide
Query:  EIKSDASWSSVKNLGGIGWIICDSNGSFICAGFKRIVQRWPIKCLEMKAITESLRCLLDRFDRPFPRIFVESDSTEVVAILNLESVDISEARSLAVDAEA
        ++  DA+WS+ +  GG+GW+I DS G  +CAG +  +       +E+ AI  +L    +  +     I VESDS + + +LN  +   S+   +  D   
Subjt:  EIKSDASWSSVKNLGGIGWIICDSNGSFICAGFKRIVQRWPIKCLEMKAITESLRCLLDRFDRPFPRIFVESDSTEVVAILNLESVDISEARSLAVDAEA

Query:  AAKLVGGVSFLFSRRETNLEAHYLARMAA
            +  VSF+F+ R  N  AH +A  A+
Subjt:  AAKLVGGVSFLFSRRETNLEAHYLARMAA

M5WQH4 Uncharacterized protein (Fragment)6.7e-0730.53Show/hide
Query:  EIKSDASWSSVKNLGGIGWIICDSNGSFICAGFKRIVQRWPIKCLEMKAITESLRCLLDRFDRPFPRIFVESDSTEVVAILNLESVDISEARSLAVDAEA
        +I  D SW++    GG+G ++ DSNG F+     R+   +    +E  A  E     +   +R F  +  ESDS ++++ +   SVD S    +  D +A
Subjt:  EIKSDASWSSVKNLGGIGWIICDSNGSFICAGFKRIVQRWPIKCLEMKAITESLRCLLDRFDRPFPRIFVESDSTEVVAILNLESVDISEARSLAVDAEA

Query:  AAKLVGGVSFLFSRRETNLEAHYLARMAAWL
            + G  F   RR  N  AH LAR A+ L
Subjt:  AAKLVGGVSFLFSRRETNLEAHYLARMAAWL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGACGGAAGAACAAACTGAAGAAGACGATGGAGAAGATGAACGCAAAGAGGAGATCAAATCTGATGCTTCGTGGTCCTCTGTGAAGAACTTGGGTGGAATTGG
GTGGATAATTTGTGACTCCAATGGATCTTTCATCTGCGCCGGTTTCAAGAGAATTGTTCAGAGATGGCCGATTAAATGTTTGGAGATGAAAGCGATTACGGAGAGTTTGC
GTTGCTTACTTGATCGGTTCGATAGACCGTTCCCGCGGATTTTCGTAGAGTCGGATTCGACTGAAGTCGTAGCCATCCTTAACCTCGAGTCCGTCGACATCTCAGAGGCT
CGCTCGTTGGCTGTGGATGCAGAAGCTGCAGCGAAGCTGGTGGGGGGAGTTTCCTTCCTGTTCAGCCGACGGGAGACAAATCTTGAAGCGCACTATCTGGCGCGCATGGC
CGCTTGGTTATTTTTTTTTGGCTTCTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAGACGGAAGAACAAACTGAAGAAGACGATGGAGAAGATGAACGCAAAGAGGAGATCAAATCTGATGCTTCGTGGTCCTCTGTGAAGAACTTGGGTGGAATTGG
GTGGATAATTTGTGACTCCAATGGATCTTTCATCTGCGCCGGTTTCAAGAGAATTGTTCAGAGATGGCCGATTAAATGTTTGGAGATGAAAGCGATTACGGAGAGTTTGC
GTTGCTTACTTGATCGGTTCGATAGACCGTTCCCGCGGATTTTCGTAGAGTCGGATTCGACTGAAGTCGTAGCCATCCTTAACCTCGAGTCCGTCGACATCTCAGAGGCT
CGCTCGTTGGCTGTGGATGCAGAAGCTGCAGCGAAGCTGGTGGGGGGAGTTTCCTTCCTGTTCAGCCGACGGGAGACAAATCTTGAAGCGCACTATCTGGCGCGCATGGC
CGCTTGGTTATTTTTTTTTGGCTTCTTCTAG
Protein sequenceShow/hide protein sequence
MEKTEEQTEEDDGEDERKEEIKSDASWSSVKNLGGIGWIICDSNGSFICAGFKRIVQRWPIKCLEMKAITESLRCLLDRFDRPFPRIFVESDSTEVVAILNLESVDISEA
RSLAVDAEAAAKLVGGVSFLFSRRETNLEAHYLARMAAWLFFFGFF