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Lag0034840 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0034840
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRAB GTPase homolog A5D
Genome locationchr3:11453277..11453606
RNA-Seq ExpressionLag0034840
SyntenyLag0034840
Gene Ontology termsGO:0006886 - intracellular protein transport (biological process)
GO:0012505 - endomembrane system (cellular component)
GO:0003924 - GTPase activity (molecular function)
GO:0005525 - GTP binding (molecular function)
InterPro domainsIPR001806 - Small GTPase
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008453919.1 PREDICTED: ras-related protein RABA5d [Cucumis melo]3.3e-2382.19Show/hide
Query:  SDDEGGEEYLFKIVITGDSAVDKTNNLLSRYARNEYNLHSKANIGVEFQTQVIDIDGKEVKTQIWDIVDEEPF
        SDDEGGEEYLFKIVI GDSAV K +NLLSRYARNE+NLHSKA IGVEFQTQV+DIDGKEVK QIWD   +E F
Subjt:  SDDEGGEEYLFKIVITGDSAVDKTNNLLSRYARNEYNLHSKANIGVEFQTQVIDIDGKEVKTQIWDIVDEEPF

XP_022138202.1 ras-related protein RABA5d [Momordica charantia]3.3e-2382.19Show/hide
Query:  SDDEGGEEYLFKIVITGDSAVDKTNNLLSRYARNEYNLHSKANIGVEFQTQVIDIDGKEVKTQIWDIVDEEPF
        SDDEGGEEYLFKIVI GDSAV K +NLLSRYARNE+NLHSKA IGVEFQTQV+DIDGKEVK QIWD   +E F
Subjt:  SDDEGGEEYLFKIVITGDSAVDKTNNLLSRYARNEYNLHSKANIGVEFQTQVIDIDGKEVKTQIWDIVDEEPF

XP_022932589.1 ras-related protein RABA5d-like [Cucurbita moschata]3.3e-2382.19Show/hide
Query:  SDDEGGEEYLFKIVITGDSAVDKTNNLLSRYARNEYNLHSKANIGVEFQTQVIDIDGKEVKTQIWDIVDEEPF
        SDDEGGEEYLFKIVI GDSAV K +NLLSRYARNE+NLHSKA IGVEFQTQV+DIDGKEVK QIWD   +E F
Subjt:  SDDEGGEEYLFKIVITGDSAVDKTNNLLSRYARNEYNLHSKANIGVEFQTQVIDIDGKEVKTQIWDIVDEEPF

XP_022972219.1 ras-related protein RABA5d-like [Cucurbita maxima]3.3e-2382.19Show/hide
Query:  SDDEGGEEYLFKIVITGDSAVDKTNNLLSRYARNEYNLHSKANIGVEFQTQVIDIDGKEVKTQIWDIVDEEPF
        SDDEGGEEYLFKIVI GDSAV K +NLLSRYARNE+NLHSKA IGVEFQTQV+DIDGKEVK QIWD   +E F
Subjt:  SDDEGGEEYLFKIVITGDSAVDKTNNLLSRYARNEYNLHSKANIGVEFQTQVIDIDGKEVKTQIWDIVDEEPF

XP_022979928.1 ras-related protein RABA5d-like [Cucurbita maxima]3.3e-2382.19Show/hide
Query:  SDDEGGEEYLFKIVITGDSAVDKTNNLLSRYARNEYNLHSKANIGVEFQTQVIDIDGKEVKTQIWDIVDEEPF
        SDDEGGEEYLFKIVI GDSAV K +NLLSRYARNE+NLHSKA IGVEFQTQV+DIDGKEVK QIWD   +E F
Subjt:  SDDEGGEEYLFKIVITGDSAVDKTNNLLSRYARNEYNLHSKANIGVEFQTQVIDIDGKEVKTQIWDIVDEEPF

TrEMBL top hitse value%identityAlignment
A0A0A0KU21 Uncharacterized protein1.6e-2382.19Show/hide
Query:  SDDEGGEEYLFKIVITGDSAVDKTNNLLSRYARNEYNLHSKANIGVEFQTQVIDIDGKEVKTQIWDIVDEEPF
        SDDEGGEEYLFKIVI GDSAV K +NLLSRYARNE+NLHSKA IGVEFQTQV+DIDGKEVK QIWD   +E F
Subjt:  SDDEGGEEYLFKIVITGDSAVDKTNNLLSRYARNEYNLHSKANIGVEFQTQVIDIDGKEVKTQIWDIVDEEPF

A0A5A7TS03 Ras-related protein RABA5d1.6e-2382.19Show/hide
Query:  SDDEGGEEYLFKIVITGDSAVDKTNNLLSRYARNEYNLHSKANIGVEFQTQVIDIDGKEVKTQIWDIVDEEPF
        SDDEGGEEYLFKIVI GDSAV K +NLLSRYARNE+NLHSKA IGVEFQTQV+DIDGKEVK QIWD   +E F
Subjt:  SDDEGGEEYLFKIVITGDSAVDKTNNLLSRYARNEYNLHSKANIGVEFQTQVIDIDGKEVKTQIWDIVDEEPF

A0A6J1CAE9 ras-related protein RABA5d1.6e-2382.19Show/hide
Query:  SDDEGGEEYLFKIVITGDSAVDKTNNLLSRYARNEYNLHSKANIGVEFQTQVIDIDGKEVKTQIWDIVDEEPF
        SDDEGGEEYLFKIVI GDSAV K +NLLSRYARNE+NLHSKA IGVEFQTQV+DIDGKEVK QIWD   +E F
Subjt:  SDDEGGEEYLFKIVITGDSAVDKTNNLLSRYARNEYNLHSKANIGVEFQTQVIDIDGKEVKTQIWDIVDEEPF

A0A6J1I7X8 ras-related protein RABA5d-like1.6e-2382.19Show/hide
Query:  SDDEGGEEYLFKIVITGDSAVDKTNNLLSRYARNEYNLHSKANIGVEFQTQVIDIDGKEVKTQIWDIVDEEPF
        SDDEGGEEYLFKIVI GDSAV K +NLLSRYARNE+NLHSKA IGVEFQTQV+DIDGKEVK QIWD   +E F
Subjt:  SDDEGGEEYLFKIVITGDSAVDKTNNLLSRYARNEYNLHSKANIGVEFQTQVIDIDGKEVKTQIWDIVDEEPF

A0A6J1IXQ6 ras-related protein RABA5d-like1.6e-2382.19Show/hide
Query:  SDDEGGEEYLFKIVITGDSAVDKTNNLLSRYARNEYNLHSKANIGVEFQTQVIDIDGKEVKTQIWDIVDEEPF
        SDDEGGEEYLFKIVI GDSAV K +NLLSRYARNE+NLHSKA IGVEFQTQV+DIDGKEVK QIWD   +E F
Subjt:  SDDEGGEEYLFKIVITGDSAVDKTNNLLSRYARNEYNLHSKANIGVEFQTQVIDIDGKEVKTQIWDIVDEEPF

SwissProt top hitse value%identityAlignment
P19892 Ras-related protein RABA5e1.9e-2171.23Show/hide
Query:  SDDEGGEEYLFKIVITGDSAVDKTNNLLSRYARNEYNLHSKANIGVEFQTQVIDIDGKEVKTQIWDIVDEEPF
        SDDEG EEYLFKIV+ GDSAV K +NLLSRYARNE++ +SKA IGVEFQTQ ++I+GKEVK QIWD   +E F
Subjt:  SDDEGGEEYLFKIVITGDSAVDKTNNLLSRYARNEYNLHSKANIGVEFQTQVIDIDGKEVKTQIWDIVDEEPF

P28187 Ras-related protein RABA5c7.2e-2173.61Show/hide
Query:  DDEGGEEYLFKIVITGDSAVDKTNNLLSRYARNEYNLHSKANIGVEFQTQVIDIDGKEVKTQIWDIVDEEPF
        DDE GEEYLFKIVI GDSAV K +NLL+RYARNE+N +SKA IGVEFQTQ + IDGKEVK QIWD   +E F
Subjt:  DDEGGEEYLFKIVITGDSAVDKTNNLLSRYARNEYNLHSKANIGVEFQTQVIDIDGKEVKTQIWDIVDEEPF

Q9FGK5 Ras-related protein RABA5a2.2e-1760.27Show/hide
Query:  SDDEGGEEYLFKIVITGDSAVDKTNNLLSRYARNEYNLHSKANIGVEFQTQVIDIDGKEVKTQIWDIVDEEPF
        S+D+  E+YLFKIV+ GDSAV K +NLL+R+AR+E+  +SK+ IGVEFQTQ +DI+GKE+K QIWD   +E F
Subjt:  SDDEGGEEYLFKIVITGDSAVDKTNNLLSRYARNEYNLHSKANIGVEFQTQVIDIDGKEVKTQIWDIVDEEPF

Q9SIP0 Ras-related protein RABA5d9.0e-2476.71Show/hide
Query:  SDDEGGEEYLFKIVITGDSAVDKTNNLLSRYARNEYNLHSKANIGVEFQTQVIDIDGKEVKTQIWDIVDEEPF
        SDDEGGEEYLFKIVI GDSAV K +NLLSRYARNE+N HSKA IGVEFQTQ ++I+GKEVK QIWD   +E F
Subjt:  SDDEGGEEYLFKIVITGDSAVDKTNNLLSRYARNEYNLHSKANIGVEFQTQVIDIDGKEVKTQIWDIVDEEPF

Q9SRS5 Ras-related protein RABA5b3.0e-1963.89Show/hide
Query:  DDEGGEEYLFKIVITGDSAVDKTNNLLSRYARNEYNLHSKANIGVEFQTQVIDIDGKEVKTQIWDIVDEEPF
        +D+ GEEYLFKIV+ GDSAV K +NLLSR++R+E++ +SKA IGVEFQTQ+++I+GKEVK QIWD   +E F
Subjt:  DDEGGEEYLFKIVITGDSAVDKTNNLLSRYARNEYNLHSKANIGVEFQTQVIDIDGKEVKTQIWDIVDEEPF

Arabidopsis top hitse value%identityAlignment
AT1G05810.1 RAB GTPase homolog A5E1.3e-2263.1Show/hide
Query:  KSQSDPEQCRPSDDEGGEEYLFKIVITGDSAVDKTNNLLSRYARNEYNLHSKANIGVEFQTQVIDIDGKEVKTQIWDIVDEEPF
        K +   ++   SDDEG EEYLFKIV+ GDSAV K +NLLSRYARNE++ +SKA IGVEFQTQ ++I+GKEVK QIWD   +E F
Subjt:  KSQSDPEQCRPSDDEGGEEYLFKIVITGDSAVDKTNNLLSRYARNEYNLHSKANIGVEFQTQVIDIDGKEVKTQIWDIVDEEPF

AT2G31680.1 RAB GTPase homolog A5D6.4e-2576.71Show/hide
Query:  SDDEGGEEYLFKIVITGDSAVDKTNNLLSRYARNEYNLHSKANIGVEFQTQVIDIDGKEVKTQIWDIVDEEPF
        SDDEGGEEYLFKIVI GDSAV K +NLLSRYARNE+N HSKA IGVEFQTQ ++I+GKEVK QIWD   +E F
Subjt:  SDDEGGEEYLFKIVITGDSAVDKTNNLLSRYARNEYNLHSKANIGVEFQTQVIDIDGKEVKTQIWDIVDEEPF

AT2G43130.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein5.1e-2273.61Show/hide
Query:  DDEGGEEYLFKIVITGDSAVDKTNNLLSRYARNEYNLHSKANIGVEFQTQVIDIDGKEVKTQIWDIVDEEPF
        DDE GEEYLFKIVI GDSAV K +NLL+RYARNE+N +SKA IGVEFQTQ + IDGKEVK QIWD   +E F
Subjt:  DDEGGEEYLFKIVITGDSAVDKTNNLLSRYARNEYNLHSKANIGVEFQTQVIDIDGKEVKTQIWDIVDEEPF

AT3G07410.1 RAB GTPase homolog A5B2.1e-2063.89Show/hide
Query:  DDEGGEEYLFKIVITGDSAVDKTNNLLSRYARNEYNLHSKANIGVEFQTQVIDIDGKEVKTQIWDIVDEEPF
        +D+ GEEYLFKIV+ GDSAV K +NLLSR++R+E++ +SKA IGVEFQTQ+++I+GKEVK QIWD   +E F
Subjt:  DDEGGEEYLFKIVITGDSAVDKTNNLLSRYARNEYNLHSKANIGVEFQTQVIDIDGKEVKTQIWDIVDEEPF

AT5G47520.1 RAB GTPase homolog A5A1.5e-1860.27Show/hide
Query:  SDDEGGEEYLFKIVITGDSAVDKTNNLLSRYARNEYNLHSKANIGVEFQTQVIDIDGKEVKTQIWDIVDEEPF
        S+D+  E+YLFKIV+ GDSAV K +NLL+R+AR+E+  +SK+ IGVEFQTQ +DI+GKE+K QIWD   +E F
Subjt:  SDDEGGEEYLFKIVITGDSAVDKTNNLLSRYARNEYNLHSKANIGVEFQTQVIDIDGKEVKTQIWDIVDEEPF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGACCCAGTACTACAAGTACAAGAAGGAGAATAAGTCACAATCCGACCCTGAGCAATGTCGTCCGTCGGATGATGAAGGTGGCGAGGAGTATCTCTTCAAGATCGT
CATTACCGGAGACTCCGCTGTTGACAAAACCAATAATTTGTTGTCTCGTTATGCCAGAAACGAGTACAATCTCCACTCCAAGGCCAACATCGGTGTCGAATTTCAGACTC
AGGTGATCGATATCGACGGCAAAGAGGTTAAGACTCAGATTTGGGACATTGTCGACGAGGAGCCATTCCTAATGCACCTGCTTGTTTTTGCAATAACTGAGGTCGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGACCCAGTACTACAAGTACAAGAAGGAGAATAAGTCACAATCCGACCCTGAGCAATGTCGTCCGTCGGATGATGAAGGTGGCGAGGAGTATCTCTTCAAGATCGT
CATTACCGGAGACTCCGCTGTTGACAAAACCAATAATTTGTTGTCTCGTTATGCCAGAAACGAGTACAATCTCCACTCCAAGGCCAACATCGGTGTCGAATTTCAGACTC
AGGTGATCGATATCGACGGCAAAGAGGTTAAGACTCAGATTTGGGACATTGTCGACGAGGAGCCATTCCTAATGCACCTGCTTGTTTTTGCAATAACTGAGGTCGAGTAA
Protein sequenceShow/hide protein sequence
METQYYKYKKENKSQSDPEQCRPSDDEGGEEYLFKIVITGDSAVDKTNNLLSRYARNEYNLHSKANIGVEFQTQVIDIDGKEVKTQIWDIVDEEPFLMHLLVFAITEVE