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Lag0034883 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0034883
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr3:11974792..11975388
RNA-Seq ExpressionLag0034883
SyntenyLag0034883
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4273082.1 unnamed protein product [Prunus armeniaca]4.7e-5251.09Show/hide
Query:  KDQMAIALGVKHVSKIGRYLGLDIEFGVSKKAMFDNIKHRVETRVKGWAEQMLSNADKEVLLKAVALALPIYAMNCFKIPISICKEINNKLAQFWWQKRK
        K Q+A  LGV+     G+YLGL+ +FG SK+ +F+ ++ R+ +++ GWAEQ LS+A KEVL+KAVA+A+P Y+M+CFK+P+S+CKEI   +A FWW+ +K
Subjt:  KDQMAIALGVKHVSKIGRYLGLDIEFGVSKKAMFDNIKHRVETRVKGWAEQMLSNADKEVLLKAVALALPIYAMNCFKIPISICKEINNKLAQFWWQKRK

Query:  DKRGIHCGAWKELTKHKSEGGLSMRDLHCFNLALLAKQGWRILTQPNTLLARIYKARYFKHGGFLEAEVKGRVSWGWMSSMAGR
        D+RGIH  +W++L + K  GG+  RDL CFNLA+LAK GWRIL  PN+LLAR+ + +Y+ H  F+ A    +VSWGW   + GR
Subjt:  DKRGIHCGAWKELTKHKSEGGLSMRDLHCFNLALLAKQGWRILTQPNTLLARIYKARYFKHGGFLEAEVKGRVSWGWMSSMAGR
CAB4274760.1 unnamed protein product [Prunus armeniaca]1.5e-4548.35Show/hide
Query:  QMAIALGVKHVSKIGRYLGLDIEFGVSKKAMFDNIKHRVETRVKGWAEQMLSNADKEVLLKAVALALPIYAMNCFKIPISICKEINNKLAQFWWQKRKDK
        QM   L VK     G+YLG+  +FG SK+ +F+ ++ +++ ++ GWAEQ LS A KEVL+KAVA+A+P Y M+CFK+P+++CKEI   +A+FWW+   DK
Subjt:  QMAIALGVKHVSKIGRYLGLDIEFGVSKKAMFDNIKHRVETRVKGWAEQMLSNADKEVLLKAVALALPIYAMNCFKIPISICKEINNKLAQFWWQKRKDK

Query:  RGIHCGAWKELTKHKSEGGLSMRDLHCFNLALLAKQGWRILTQPNTLLARIYKARYFKHGGFLEAEVKGRVSWGWMSSMAGR
         GIH  +W +L++ K  GGL  RDL CFN+ALLAK GWRIL  P++LLA +   +YF    FL A  +   SWGW   + GR
Subjt:  RGIHCGAWKELTKHKSEGGLSMRDLHCFNLALLAKQGWRILTQPNTLLARIYKARYFKHGGFLEAEVKGRVSWGWMSSMAGR
CAB4279811.1 unnamed protein product [Prunus armeniaca]1.4e-5150.54Show/hide
Query:  KDQMAIALGVKHVSKIGRYLGLDIEFGVSKKAMFDNIKHRVETRVKGWAEQMLSNADKEVLLKAVALALPIYAMNCFKIPISICKEINNKLAQFWWQKRK
        K Q+A  LGV+H    G+YLGL+ +FGVSK+ +F+ ++ R+ +++ GWAEQ LS+A KEVL+KAVA+A+P Y+M+CFK+P+S+CKEI   +A FWW+  K
Subjt:  KDQMAIALGVKHVSKIGRYLGLDIEFGVSKKAMFDNIKHRVETRVKGWAEQMLSNADKEVLLKAVALALPIYAMNCFKIPISICKEINNKLAQFWWQKRK

Query:  DKRGIHCGAWKELTKHKSEGGLSMRDLHCFNLALLAKQGWRILTQPNTLLARIYKARYFKHGGFLEAEVKGRVSWGWMSSMAGR
        D+RGIH  +W++L + K  GG+  RDL CFNLA+L K GWRIL  PN+LLAR+ + +Y+    F+      +VSWGW   + GR
Subjt:  DKRGIHCGAWKELTKHKSEGGLSMRDLHCFNLALLAKQGWRILTQPNTLLARIYKARYFKHGGFLEAEVKGRVSWGWMSSMAGR
CAB4310240.1 unnamed protein product [Prunus armeniaca]1.4e-5150.54Show/hide
Query:  KDQMAIALGVKHVSKIGRYLGLDIEFGVSKKAMFDNIKHRVETRVKGWAEQMLSNADKEVLLKAVALALPIYAMNCFKIPISICKEINNKLAQFWWQKRK
        K Q+A  LGV+H    G+YLGL+ +FGVSK+ +F+ ++ R+ +++ GWAEQ LS+A KEVL+KAVA+A+P Y+M+CFK+P+S+CKEI   +A FWW+  K
Subjt:  KDQMAIALGVKHVSKIGRYLGLDIEFGVSKKAMFDNIKHRVETRVKGWAEQMLSNADKEVLLKAVALALPIYAMNCFKIPISICKEINNKLAQFWWQKRK

Query:  DKRGIHCGAWKELTKHKSEGGLSMRDLHCFNLALLAKQGWRILTQPNTLLARIYKARYFKHGGFLEAEVKGRVSWGWMSSMAGR
        D+RGIH  +W++L + K  GG+  RDL CFNLA+L K GWRIL  PN+LLAR+ + +Y+    F+      +VSWGW   + GR
Subjt:  DKRGIHCGAWKELTKHKSEGGLSMRDLHCFNLALLAKQGWRILTQPNTLLARIYKARYFKHGGFLEAEVKGRVSWGWMSSMAGR
KAG7586949.1 Reverse transcriptase domain [Arabidopsis thaliana x Arabidopsis arenosa]1.9e-4549.47Show/hide
Query:  LGVKHVSKIGRYLGLDIEFGVSKKAMFDNIKHRVETRVKGWAEQMLSNADKEVLLKAVALALPIYAMNCFKIPISICKEINNKLAQFWWQKRKDKRGIHC
        LG+ HV   G+YLGL  +FG  K  MF+ I  RV+ R +GW+ + LS A KE+L+K++A+ALP+Y+MNCF +P +IC EI + L  FWW K K KR I  
Subjt:  LGVKHVSKIGRYLGLDIEFGVSKKAMFDNIKHRVETRVKGWAEQMLSNADKEVLLKAVALALPIYAMNCFKIPISICKEINNKLAQFWWQKRKDKRGIHC

Query:  GAWKELTKHKSEGGLSMRDLHCFNLALLAKQGWRILTQPNTLLARIYKARYFKHGGFLEAEVKGRVSWGWMSSMAGR--VDEGVSMESGS
         AW+ +T  K EGGL  +DLH FN ALLAKQ WRI+T P++LLAR+YK  Y  H  FL+A    RVS+GW S   G+  + +G+ +  G+
Subjt:  GAWKELTKHKSEGGLSMRDLHCFNLALLAKQGWRILTQPNTLLARIYKARYFKHGGFLEAEVKGRVSWGWMSSMAGR--VDEGVSMESGS
TrEMBL top hitse value%identityAlignment
A0A6J5U034 Reverse transcriptase domain-containing protein2.1e-4545.11Show/hide
Query:  KDQMAIALGVKHVSKIGRYLGLDIEFGVSKKAMFDNIKHRVETRVKGWAEQMLSNADKEVLLKAVALALPIYAMNCFKIPISICKEINNKLAQFWWQKRK
        + Q+   L V+     GRYLGL  +FG SK+ +F+ +++++  ++ GW+EQ LS A KEVL+KAVA+A+P YAM+CF++PI++CKEI  ++ ++WW+  K
Subjt:  KDQMAIALGVKHVSKIGRYLGLDIEFGVSKKAMFDNIKHRVETRVKGWAEQMLSNADKEVLLKAVALALPIYAMNCFKIPISICKEINNKLAQFWWQKRK

Query:  DKRGIHCGAWKELTKHKSEGGLSMRDLHCFNLALLAKQGWRILTQPNTLLARIYKARYFKHGGFLEAEVKGRVSWGWMSSMAGR
        + +GIH   W+ L+  K  GG+  RDL CFNLA+LAK GWRI+  P++LLA  Y+ +YF+   F+ A      SWGW   + GR
Subjt:  DKRGIHCGAWKELTKHKSEGGLSMRDLHCFNLALLAKQGWRILTQPNTLLARIYKARYFKHGGFLEAEVKGRVSWGWMSSMAGR
A0A6J5UAY2 Reverse transcriptase domain-containing protein2.3e-5251.09Show/hide
Query:  KDQMAIALGVKHVSKIGRYLGLDIEFGVSKKAMFDNIKHRVETRVKGWAEQMLSNADKEVLLKAVALALPIYAMNCFKIPISICKEINNKLAQFWWQKRK
        K Q+A  LGV+     G+YLGL+ +FG SK+ +F+ ++ R+ +++ GWAEQ LS+A KEVL+KAVA+A+P Y+M+CFK+P+S+CKEI   +A FWW+ +K
Subjt:  KDQMAIALGVKHVSKIGRYLGLDIEFGVSKKAMFDNIKHRVETRVKGWAEQMLSNADKEVLLKAVALALPIYAMNCFKIPISICKEINNKLAQFWWQKRK

Query:  DKRGIHCGAWKELTKHKSEGGLSMRDLHCFNLALLAKQGWRILTQPNTLLARIYKARYFKHGGFLEAEVKGRVSWGWMSSMAGR
        D+RGIH  +W++L + K  GG+  RDL CFNLA+LAK GWRIL  PN+LLAR+ + +Y+ H  F+ A    +VSWGW   + GR
Subjt:  DKRGIHCGAWKELTKHKSEGGLSMRDLHCFNLALLAKQGWRILTQPNTLLARIYKARYFKHGGFLEAEVKGRVSWGWMSSMAGR
A0A6J5UE59 Reverse transcriptase domain-containing protein7.1e-4648.35Show/hide
Query:  QMAIALGVKHVSKIGRYLGLDIEFGVSKKAMFDNIKHRVETRVKGWAEQMLSNADKEVLLKAVALALPIYAMNCFKIPISICKEINNKLAQFWWQKRKDK
        QM   L VK     G+YLG+  +FG SK+ +F+ ++ +++ ++ GWAEQ LS A KEVL+KAVA+A+P Y M+CFK+P+++CKEI   +A+FWW+   DK
Subjt:  QMAIALGVKHVSKIGRYLGLDIEFGVSKKAMFDNIKHRVETRVKGWAEQMLSNADKEVLLKAVALALPIYAMNCFKIPISICKEINNKLAQFWWQKRKDK

Query:  RGIHCGAWKELTKHKSEGGLSMRDLHCFNLALLAKQGWRILTQPNTLLARIYKARYFKHGGFLEAEVKGRVSWGWMSSMAGR
         GIH  +W +L++ K  GGL  RDL CFN+ALLAK GWRIL  P++LLA +   +YF    FL A  +   SWGW   + GR
Subjt:  RGIHCGAWKELTKHKSEGGLSMRDLHCFNLALLAKQGWRILTQPNTLLARIYKARYFKHGGFLEAEVKGRVSWGWMSSMAGR
A0A6J5UV01 Reverse transcriptase domain-containing protein6.6e-5250.54Show/hide
Query:  KDQMAIALGVKHVSKIGRYLGLDIEFGVSKKAMFDNIKHRVETRVKGWAEQMLSNADKEVLLKAVALALPIYAMNCFKIPISICKEINNKLAQFWWQKRK
        K Q+A  LGV+H    G+YLGL+ +FGVSK+ +F+ ++ R+ +++ GWAEQ LS+A KEVL+KAVA+A+P Y+M+CFK+P+S+CKEI   +A FWW+  K
Subjt:  KDQMAIALGVKHVSKIGRYLGLDIEFGVSKKAMFDNIKHRVETRVKGWAEQMLSNADKEVLLKAVALALPIYAMNCFKIPISICKEINNKLAQFWWQKRK

Query:  DKRGIHCGAWKELTKHKSEGGLSMRDLHCFNLALLAKQGWRILTQPNTLLARIYKARYFKHGGFLEAEVKGRVSWGWMSSMAGR
        D+RGIH  +W++L + K  GG+  RDL CFNLA+L K GWRIL  PN+LLAR+ + +Y+    F+      +VSWGW   + GR
Subjt:  DKRGIHCGAWKELTKHKSEGGLSMRDLHCFNLALLAKQGWRILTQPNTLLARIYKARYFKHGGFLEAEVKGRVSWGWMSSMAGR
A0A6J5X8F1 Reverse transcriptase domain-containing protein6.6e-5250.54Show/hide
Query:  KDQMAIALGVKHVSKIGRYLGLDIEFGVSKKAMFDNIKHRVETRVKGWAEQMLSNADKEVLLKAVALALPIYAMNCFKIPISICKEINNKLAQFWWQKRK
        K Q+A  LGV+H    G+YLGL+ +FGVSK+ +F+ ++ R+ +++ GWAEQ LS+A KEVL+KAVA+A+P Y+M+CFK+P+S+CKEI   +A FWW+  K
Subjt:  KDQMAIALGVKHVSKIGRYLGLDIEFGVSKKAMFDNIKHRVETRVKGWAEQMLSNADKEVLLKAVALALPIYAMNCFKIPISICKEINNKLAQFWWQKRK

Query:  DKRGIHCGAWKELTKHKSEGGLSMRDLHCFNLALLAKQGWRILTQPNTLLARIYKARYFKHGGFLEAEVKGRVSWGWMSSMAGR
        D+RGIH  +W++L + K  GG+  RDL CFNLA+L K GWRIL  PN+LLAR+ + +Y+    F+      +VSWGW   + GR
Subjt:  DKRGIHCGAWKELTKHKSEGGLSMRDLHCFNLALLAKQGWRILTQPNTLLARIYKARYFKHGGFLEAEVKGRVSWGWMSSMAGR
SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657501.9e-1632.5Show/hide
Query:  KAMFDNIKHRVETRVKGWAEQMLSNADKEVLLKAVALALPIYAMNCFKIPISICKEINNKLAQFWWQKRKDKRGIHCGAWKELTKHKSEGGLSMRDLHCF
        K  F  I  RV +R+ GW E+ LS A +  L KAV  ++P+++M+   +P SI   ++     F W    +K+  H   W ++   K EGGL +R     
Subjt:  KAMFDNIKHRVETRVKGWAEQMLSNADKEVLLKAVALALPIYAMNCFKIPISICKEINNKLAQFWWQKRKDKRGIHCGAWKELTKHKSEGGLSMRDLHCF

Query:  NLALLAKQGWRILTQPNTLLARIYKARYFKHGGFLEAE----VKGRVSWGWMSSMAGRVD
        N AL++K GWR+L + N+L   + + +Y  H G +        KG  S  W S   G  D
Subjt:  NLALLAKQGWRILTQPNTLLARIYKARYFKHGGFLEAE----VKGRVSWGWMSSMAGRVD
P93295 Uncharacterized mitochondrial protein AtMg003106.0e-2646.22Show/hide
Query:  LALPIYAMNCFKIPISICKEINNKLAQFWWQKRKDKRGIHCGAWKELTKHK-SEGGLSMRDLHCFNLALLAKQGWRILTQPNTLLARIYKARYFKHGGFL
        +ALP+YAM+CF++   +CK++ + + +FWW   ++KR I   AW++L K K  +GGL  RDL  FN ALLAKQ +RI+ QP+TLL+R+ ++RYF H   +
Subjt:  LALPIYAMNCFKIPISICKEINNKLAQFWWQKRKDKRGIHCGAWKELTKHK-SEGGLSMRDLHCFNLALLAKQGWRILTQPNTLLARIYKARYFKHGGFL

Query:  EAEVKGRVSWGWMSSMAGR
        E  V  R S+ W S + GR
Subjt:  EAEVKGRVSWGWMSSMAGR
Arabidopsis top hitse value%identityAlignment
AT4G29090.1 Ribonuclease H-like superfamily protein2.5e-2743.22Show/hide
Query:  LALPIYAMNCFKIPISICKEINNKLAQFWWQKRKDKRGIHCGAWKELTKHKSEGGLSMRDLHCFNLALLAKQGWRILTQPNTLLARIYKARYFKHGGFLE
        +ALP Y M CF +P ++CK+I + LA FWW+ +++ +G+H  AW  L+ +K+EGG+  +D+  FNLALL KQ WR+L++P +L+A+++K+RYF     L 
Subjt:  LALPIYAMNCFKIPISICKEINNKLAQFWWQKRKDKRGIHCGAWKELTKHKSEGGLSMRDLHCFNLALLAKQGWRILTQPNTLLARIYKARYFKHGGFLE

Query:  AEVKGRVSWGWMSSMAGR
        A +  R S+ W S  A +
Subjt:  AEVKGRVSWGWMSSMAGR
ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein4.3e-2746.22Show/hide
Query:  LALPIYAMNCFKIPISICKEINNKLAQFWWQKRKDKRGIHCGAWKELTKHK-SEGGLSMRDLHCFNLALLAKQGWRILTQPNTLLARIYKARYFKHGGFL
        +ALP+YAM+CF++   +CK++ + + +FWW   ++KR I   AW++L K K  +GGL  RDL  FN ALLAKQ +RI+ QP+TLL+R+ ++RYF H   +
Subjt:  LALPIYAMNCFKIPISICKEINNKLAQFWWQKRKDKRGIHCGAWKELTKHK-SEGGLSMRDLHCFNLALLAKQGWRILTQPNTLLARIYKARYFKHGGFL

Query:  EAEVKGRVSWGWMSSMAGR
        E  V  R S+ W S + GR
Subjt:  EAEVKGRVSWGWMSSMAGR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATGTAAGGATCAAATGGCTATAGCGCTGGGCGTTAAACATGTGAGTAAGATTGGCAGATACTTGGGGTTGGACATTGAATTTGGTGTATCGAAGAAAGCGATGTT
TGATAATATTAAGCACAGAGTCGAAACGAGGGTTAAAGGTTGGGCCGAACAAATGTTGTCCAACGCCGACAAAGAGGTCTTGTTGAAGGCAGTCGCTTTAGCATTACCAA
TTTATGCCATGAACTGCTTTAAGATACCAATATCAATTTGTAAGGAGATAAACAACAAACTTGCTCAATTCTGGTGGCAGAAGAGGAAAGACAAAAGAGGCATCCATTGT
GGGGCTTGGAAGGAGTTAACGAAGCATAAAAGTGAGGGAGGATTGAGTATGCGTGATCTCCATTGTTTTAATTTAGCCCTATTGGCAAAGCAAGGGTGGAGGATCTTAAC
CCAACCGAACACGTTGCTGGCCAGAATCTACAAAGCACGGTATTTTAAACATGGGGGGTTTTTAGAAGCTGAAGTCAAAGGAAGAGTGTCTTGGGGATGGATGAGTAGTA
TGGCGGGTCGTGTTGATGAAGGGGTTTCGATGGAGAGTGGGAGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAATGTAAGGATCAAATGGCTATAGCGCTGGGCGTTAAACATGTGAGTAAGATTGGCAGATACTTGGGGTTGGACATTGAATTTGGTGTATCGAAGAAAGCGATGTT
TGATAATATTAAGCACAGAGTCGAAACGAGGGTTAAAGGTTGGGCCGAACAAATGTTGTCCAACGCCGACAAAGAGGTCTTGTTGAAGGCAGTCGCTTTAGCATTACCAA
TTTATGCCATGAACTGCTTTAAGATACCAATATCAATTTGTAAGGAGATAAACAACAAACTTGCTCAATTCTGGTGGCAGAAGAGGAAAGACAAAAGAGGCATCCATTGT
GGGGCTTGGAAGGAGTTAACGAAGCATAAAAGTGAGGGAGGATTGAGTATGCGTGATCTCCATTGTTTTAATTTAGCCCTATTGGCAAAGCAAGGGTGGAGGATCTTAAC
CCAACCGAACACGTTGCTGGCCAGAATCTACAAAGCACGGTATTTTAAACATGGGGGGTTTTTAGAAGCTGAAGTCAAAGGAAGAGTGTCTTGGGGATGGATGAGTAGTA
TGGCGGGTCGTGTTGATGAAGGGGTTTCGATGGAGAGTGGGAGCTGA
Protein sequenceShow/hide protein sequence
MECKDQMAIALGVKHVSKIGRYLGLDIEFGVSKKAMFDNIKHRVETRVKGWAEQMLSNADKEVLLKAVALALPIYAMNCFKIPISICKEINNKLAQFWWQKRKDKRGIHC
GAWKELTKHKSEGGLSMRDLHCFNLALLAKQGWRILTQPNTLLARIYKARYFKHGGFLEAEVKGRVSWGWMSSMAGRVDEGVSMESGS