; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0034886 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0034886
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionNuclear transcription factor Y subunit
Genome locationchr3:12001465..12004020
RNA-Seq ExpressionLag0034886
SyntenyLag0034886
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0016602 - CCAAT-binding factor complex (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
InterPro domainsIPR001289 - Nuclear transcription factor Y subunit A
IPR018362 - CCAAT-binding factor, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139033.1 nuclear transcription factor Y subunit A-1 [Cucumis sativus]7.4e-13392.25Show/hide
Query:  MQSKSETNNQLESDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATESPHSAGSYRQDAQ
        MQSKSETNNQL+S  NGAPSTSIYYEPWWRG+GYN  PLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQAT SPHSAGSYRQD Q
Subjt:  MQSKSETNNQLESDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATESPHSAGSYRQDAQ

Query:  KMQHVSSSLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
        KMQHVSS+LPAMHGECL QSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVG PHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
Subjt:  KMQHVSSSLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE

Query:  KKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDNVNQSGYHLNDGSEQQNGSSLTNKASE
        KK IKARKPYLHESRHQHAIRR+R SGGRFAKK+EA+GKE HSD VN+S Y LNDGSEQQNGSSLTNKASE
Subjt:  KKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDNVNQSGYHLNDGSEQQNGSSLTNKASE

XP_008450422.1 PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X1 [Cucumis melo]3.3e-13392.25Show/hide
Query:  MQSKSETNNQLESDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATESPHSAGSYRQDAQ
        MQSKSETNNQL  DPNGAPSTSIYYEPWWRG+GYN  PLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQAT SPHSAGSYRQD +
Subjt:  MQSKSETNNQLESDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATESPHSAGSYRQDAQ

Query:  KMQHVSSSLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
        KMQHVSS+LPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVG PHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
Subjt:  KMQHVSSSLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE

Query:  KKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDNVNQSGYHLNDGSEQQNGSSLTNKASE
        KK IKARKPYLHESRHQHAIRR+R SGGRFAKK+EADGKE HSD V++SGY LNDGSEQQ GSSL NKASE
Subjt:  KKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDNVNQSGYHLNDGSEQQNGSSLTNKASE

XP_008450423.1 PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X2 [Cucumis melo]3.3e-13392.25Show/hide
Query:  MQSKSETNNQLESDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATESPHSAGSYRQDAQ
        MQSKSETNNQL  DPNGAPSTSIYYEPWWRG+GYN  PLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQAT SPHSAGSYRQD +
Subjt:  MQSKSETNNQLESDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATESPHSAGSYRQDAQ

Query:  KMQHVSSSLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
        KMQHVSS+LPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVG PHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
Subjt:  KMQHVSSSLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE

Query:  KKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDNVNQSGYHLNDGSEQQNGSSLTNKASE
        KK IKARKPYLHESRHQHAIRR+R SGGRFAKK+EADGKE HSD V++SGY LNDGSEQQ GSSL NKASE
Subjt:  KKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDNVNQSGYHLNDGSEQQNGSSLTNKASE

XP_022154358.1 nuclear transcription factor Y subunit A-1-like [Momordica charantia]2.7e-13592.62Show/hide
Query:  MQSKSETNNQLESDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATESPHSAGSYRQDAQ
        MQSKSETNNQLESDPNGAPSTS+YYEPWWRGIGYNPIPLPVVGGN SSSTSLEFPNGGSESNDGQSVSNND+NDEEDDV+KEVQAT SPHSAGSYR DAQ
Subjt:  MQSKSETNNQLESDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATESPHSAGSYRQDAQ

Query:  KMQHVSSSLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
        KMQHVSS+LPAMHGEC TQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
Subjt:  KMQHVSSSLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE

Query:  KKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDNVNQSGYHLNDGSEQQNGSSLTNKASE
        KKLIKARKPYLHESRHQHAIRRTRGSGGRFAKK+EA+  EMHSD  N+SGY LNDGSEQ+NGSS  NKAS+
Subjt:  KKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDNVNQSGYHLNDGSEQQNGSSLTNKASE

XP_022968054.1 nuclear transcription factor Y subunit A-1 isoform X1 [Cucurbita maxima]4.8e-13291.51Show/hide
Query:  MQSKSETNNQLESDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATESPHSAGSYRQDAQ
        MQSKSETNNQ ESDPNG PSTSIYYEPWWRGIGYNPIPLPVVGGN+SSSTSLEFPNGGSESNDGQSVSNNDVNDEE DVSKEVQAT SPHSAG+YRQ AQ
Subjt:  MQSKSETNNQLESDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATESPHSAGSYRQDAQ

Query:  KMQHVSSSLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
        KMQHVSS+ P MHGECL QSTQLELVGHSIACASNPYQDP YGGMMAFYGHQPLGYP VG PHARMPLPIEIAQDPV VNAKQYQGILRRRQARAKAEAE
Subjt:  KMQHVSSSLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE

Query:  KKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDNVNQSGYHLNDGSEQQNGSSLTNKASE
        KK IKARKPYLHESRHQHAIRRTRGSGGRF KKNEADGKEMHSD VN++G HLNDGS+QQNGSSLTN ASE
Subjt:  KKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDNVNQSGYHLNDGSEQQNGSSLTNKASE

TrEMBL top hitse value%identityAlignment
A0A0A0M2S3 Nuclear transcription factor Y subunit3.6e-13392.25Show/hide
Query:  MQSKSETNNQLESDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATESPHSAGSYRQDAQ
        MQSKSETNNQL+S  NGAPSTSIYYEPWWRG+GYN  PLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQAT SPHSAGSYRQD Q
Subjt:  MQSKSETNNQLESDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATESPHSAGSYRQDAQ

Query:  KMQHVSSSLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
        KMQHVSS+LPAMHGECL QSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVG PHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
Subjt:  KMQHVSSSLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE

Query:  KKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDNVNQSGYHLNDGSEQQNGSSLTNKASE
        KK IKARKPYLHESRHQHAIRR+R SGGRFAKK+EA+GKE HSD VN+S Y LNDGSEQQNGSSLTNKASE
Subjt:  KKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDNVNQSGYHLNDGSEQQNGSSLTNKASE

A0A1S3BP85 Nuclear transcription factor Y subunit1.6e-13392.25Show/hide
Query:  MQSKSETNNQLESDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATESPHSAGSYRQDAQ
        MQSKSETNNQL  DPNGAPSTSIYYEPWWRG+GYN  PLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQAT SPHSAGSYRQD +
Subjt:  MQSKSETNNQLESDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATESPHSAGSYRQDAQ

Query:  KMQHVSSSLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
        KMQHVSS+LPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVG PHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
Subjt:  KMQHVSSSLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE

Query:  KKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDNVNQSGYHLNDGSEQQNGSSLTNKASE
        KK IKARKPYLHESRHQHAIRR+R SGGRFAKK+EADGKE HSD V++SGY LNDGSEQQ GSSL NKASE
Subjt:  KKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDNVNQSGYHLNDGSEQQNGSSLTNKASE

A0A1S3BPV3 Nuclear transcription factor Y subunit1.6e-13392.25Show/hide
Query:  MQSKSETNNQLESDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATESPHSAGSYRQDAQ
        MQSKSETNNQL  DPNGAPSTSIYYEPWWRG+GYN  PLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQAT SPHSAGSYRQD +
Subjt:  MQSKSETNNQLESDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATESPHSAGSYRQDAQ

Query:  KMQHVSSSLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
        KMQHVSS+LPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVG PHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
Subjt:  KMQHVSSSLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE

Query:  KKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDNVNQSGYHLNDGSEQQNGSSLTNKASE
        KK IKARKPYLHESRHQHAIRR+R SGGRFAKK+EADGKE HSD V++SGY LNDGSEQQ GSSL NKASE
Subjt:  KKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDNVNQSGYHLNDGSEQQNGSSLTNKASE

A0A5D3D5Q2 Nuclear transcription factor Y subunit1.6e-13392.25Show/hide
Query:  MQSKSETNNQLESDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATESPHSAGSYRQDAQ
        MQSKSETNNQL  DPNGAPSTSIYYEPWWRG+GYN  PLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQAT SPHSAGSYRQD +
Subjt:  MQSKSETNNQLESDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATESPHSAGSYRQDAQ

Query:  KMQHVSSSLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
        KMQHVSS+LPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVG PHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
Subjt:  KMQHVSSSLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE

Query:  KKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDNVNQSGYHLNDGSEQQNGSSLTNKASE
        KK IKARKPYLHESRHQHAIRR+R SGGRFAKK+EADGKE HSD V++SGY LNDGSEQQ GSSL NKASE
Subjt:  KKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDNVNQSGYHLNDGSEQQNGSSLTNKASE

A0A6J1DK42 Nuclear transcription factor Y subunit1.3e-13592.62Show/hide
Query:  MQSKSETNNQLESDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATESPHSAGSYRQDAQ
        MQSKSETNNQLESDPNGAPSTS+YYEPWWRGIGYNPIPLPVVGGN SSSTSLEFPNGGSESNDGQSVSNND+NDEEDDV+KEVQAT SPHSAGSYR DAQ
Subjt:  MQSKSETNNQLESDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATESPHSAGSYRQDAQ

Query:  KMQHVSSSLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
        KMQHVSS+LPAMHGEC TQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
Subjt:  KMQHVSSSLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE

Query:  KKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDNVNQSGYHLNDGSEQQNGSSLTNKASE
        KKLIKARKPYLHESRHQHAIRRTRGSGGRFAKK+EA+  EMHSD  N+SGY LNDGSEQ+NGSS  NKAS+
Subjt:  KKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDNVNQSGYHLNDGSEQQNGSSLTNKASE

SwissProt top hitse value%identityAlignment
Q84JP1 Nuclear transcription factor Y subunit A-71.7e-2340.86Show/hide
Query:  ESPHSAGSYRQDAQKMQHVSSSLP-AMHGECLTQSTQLELVG--HSIACASNPYQDPYYGGMMAFYGHQPLG--YPMVGAPHARMPLPIEIAQDPVFVNA
        E   + GS+ +  Q+  H    +P A + E +  S      G  +S+A    PY DPYY  + A       G    ++G     +PLP +  ++PVFVNA
Subjt:  ESPHSAGSYRQDAQKMQHVSSSLP-AMHGECLTQSTQLELVG--HSIACASNPYQDPYYGGMMAFYGHQPLG--YPMVGAPHARMPLPIEIAQDPVFVNA

Query:  KQYQGILRRRQARAKAEAEKKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDNVNQSGYHLNDGSEQQNGSSLTN
        KQY GILRRRQ+RA+ E++ K+IK+RKPYLHESRH HAIRR RG GGRF    + D  E H D+ ++   +L+ G      SS T+
Subjt:  KQYQGILRRRQARAKAEAEKKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDNVNQSGYHLNDGSEQQNGSSLTN

Q8VY64 Nuclear transcription factor Y subunit A-45.9e-2450.77Show/hide
Query:  TQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYP-----MVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKKLIKARKPYLH
        T S   E + H +     PY DPYY  + A   + P  YP     ++G     +PL  +  ++PVFVNAKQY GILRRRQ+RAK EA  + IKA+KPY+H
Subjt:  TQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYP-----MVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKKLIKARKPYLH

Query:  ESRHQHAIRRTRGSGGRF--AKKNEADGKE
        ESRH HAIRR RG GGRF  AKK   D KE
Subjt:  ESRHQHAIRRTRGSGGRF--AKKNEADGKE

Q93ZH2 Nuclear transcription factor Y subunit A-36.8e-2035.95Show/hide
Query:  IGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATESPHSAGSYRQDAQKMQHVSSSLPAMHGECLTQ-------STQLE
        I +  +P   V     S+ SL       +S  G   +   ++ ++ D S   Q+T   ++  +   D    + +S S  A  G  +TQ         Q  
Subjt:  IGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATESPHSAGSYRQDAQKMQHVSSSLPAMHGECLTQ-------STQLE

Query:  LVG----HSIACASN---PYQDPYYGGMMA--FYGHQPLGYP-MVGAPHARMPLPIEIAQ-DPVFVNAKQYQGILRRRQARAKAEAEKKLIKARKPYLHE
        + G    H     +N    Y DP+YGG++A  +    P   P MV     R+PLP E+ + DPVFVNAKQY  I+RRRQ RAK EA+ KLI+ARKPYLHE
Subjt:  LVG----HSIACASN---PYQDPYYGGMMA--FYGHQPLGYP-MVGAPHARMPLPIEIAQ-DPVFVNAKQYQGILRRRQARAKAEAEKKLIKARKPYLHE

Query:  SRHQHAIRRTRGSGGRF-------AKKNEADGKEMHSDNVNQ
        SRH HA++R RGSGGRF        +  +A  +E   D + Q
Subjt:  SRHQHAIRRTRGSGGRF-------AKKNEADGKEMHSDNVNQ

Q945M9 Nuclear transcription factor Y subunit A-92.6e-4848.58Show/hide
Query:  MQSKSET-NNQLESDPNGAPSTSI-YYEPWWR-GIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATESPHSAGSYRQ
        M SKS++  N+++S+ +G  S+SI    PW R     N       G  +S S +L       ESN  +S SN D     + V+KE Q T SP SAG Y  
Subjt:  MQSKSET-NNQLESDPNGAPSTSI-YYEPWWR-GIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATESPHSAGSYRQ

Query:  DAQKMQHVSSSLPAMHGECLTQSTQLELVGHSIACA-SNPYQDPYYGGMMAFYGHQPLGY-PMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARA
          Q+  H   + P  H          +LVGH++  A SNPYQDPYY G+M  YGH PLG+ P  G PH+RMPLP E+AQ+PVFVNAKQYQ ILRRRQARA
Subjt:  DAQKMQHVSSSLPAMHGECLTQSTQLELVGHSIACA-SNPYQDPYYGGMMAFYGHQPLGY-PMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARA

Query:  KAEAEKKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEAD-----GKEMHSDNVNQSGYHLN-DGSEQQNGSSLTNKASE
        KAE EKKLIK+RKPYLHESRHQHA+RR RG+GGRFAKK   +      +E  + +V QS    N D  E  NG   T +  E
Subjt:  KAEAEKKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEAD-----GKEMHSDNVNQSGYHLN-DGSEQQNGSSLTNKASE

Q9LXV5 Nuclear transcription factor Y subunit A-11.6e-5048.29Show/hide
Query:  MQSKSETNNQLE-SDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATESPHSAGSYRQD
        MQSK    N+ E ++ +      +Y EPWW+   +  +P     G  S+S+SL+ PN GSESND  S S +  +N E D   K+ QA  S  S  ++  +
Subjt:  MQSKSETNNQLE-SDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATESPHSAGSYRQD

Query:  AQKMQHVSSSLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKA
               + S+  MH + L Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ LG+ P +G P  R  LP+++AQ+PV+VNAKQY+GILRRR+ARAKA
Subjt:  AQKMQHVSSSLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKA

Query:  EAEKKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDNVNQSGYHLN-DGSEQ
        E E+K+I+ RKPYLHESRH+HA+RR R SGGRFAKK+E +  E       + G   N  GSEQ
Subjt:  EAEKKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDNVNQSGYHLN-DGSEQ

Arabidopsis top hitse value%identityAlignment
AT3G20910.1 nuclear factor Y, subunit A91.9e-4948.58Show/hide
Query:  MQSKSET-NNQLESDPNGAPSTSI-YYEPWWR-GIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATESPHSAGSYRQ
        M SKS++  N+++S+ +G  S+SI    PW R     N       G  +S S +L       ESN  +S SN D     + V+KE Q T SP SAG Y  
Subjt:  MQSKSET-NNQLESDPNGAPSTSI-YYEPWWR-GIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATESPHSAGSYRQ

Query:  DAQKMQHVSSSLPAMHGECLTQSTQLELVGHSIACA-SNPYQDPYYGGMMAFYGHQPLGY-PMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARA
          Q+  H   + P  H          +LVGH++  A SNPYQDPYY G+M  YGH PLG+ P  G PH+RMPLP E+AQ+PVFVNAKQYQ ILRRRQARA
Subjt:  DAQKMQHVSSSLPAMHGECLTQSTQLELVGHSIACA-SNPYQDPYYGGMMAFYGHQPLGY-PMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARA

Query:  KAEAEKKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEAD-----GKEMHSDNVNQSGYHLN-DGSEQQNGSSLTNKASE
        KAE EKKLIK+RKPYLHESRHQHA+RR RG+GGRFAKK   +      +E  + +V QS    N D  E  NG   T +  E
Subjt:  KAEAEKKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEAD-----GKEMHSDNVNQSGYHLN-DGSEQQNGSSLTNKASE

AT5G12840.1 nuclear factor Y, subunit A11.2e-5148.29Show/hide
Query:  MQSKSETNNQLE-SDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATESPHSAGSYRQD
        MQSK    N+ E ++ +      +Y EPWW+   +  +P     G  S+S+SL+ PN GSESND  S S +  +N E D   K+ QA  S  S  ++  +
Subjt:  MQSKSETNNQLE-SDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATESPHSAGSYRQD

Query:  AQKMQHVSSSLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKA
               + S+  MH + L Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ LG+ P +G P  R  LP+++AQ+PV+VNAKQY+GILRRR+ARAKA
Subjt:  AQKMQHVSSSLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKA

Query:  EAEKKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDNVNQSGYHLN-DGSEQ
        E E+K+I+ RKPYLHESRH+HA+RR R SGGRFAKK+E +  E       + G   N  GSEQ
Subjt:  EAEKKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDNVNQSGYHLN-DGSEQ

AT5G12840.2 nuclear factor Y, subunit A13.4e-5149.06Show/hide
Query:  MQSKSETNNQLE-SDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATESPHSAGSYRQD
        MQSK    N+ E ++ +      +Y EPWW+   +  +P     G  S+S+SL+ PN GSESND  S S +  +N E D   K+ QA      A S R D
Subjt:  MQSKSETNNQLE-SDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATESPHSAGSYRQD

Query:  AQKMQ--HVSSSLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARA
           M+    + S+  MH + L Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ LG+ P +G P  R  LP+++AQ+PV+VNAKQY+GILRRR+ARA
Subjt:  AQKMQ--HVSSSLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARA

Query:  KAEAEKKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDNVNQSGYHLN-DGSEQ
        KAE E+K+I+ RKPYLHESRH+HA+RR R SGGRFAKK+E +  E       + G   N  GSEQ
Subjt:  KAEAEKKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDNVNQSGYHLN-DGSEQ

AT5G12840.3 nuclear factor Y, subunit A11.2e-5148.29Show/hide
Query:  MQSKSETNNQLE-SDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATESPHSAGSYRQD
        MQSK    N+ E ++ +      +Y EPWW+   +  +P     G  S+S+SL+ PN GSESND  S S +  +N E D   K+ QA  S  S  ++  +
Subjt:  MQSKSETNNQLE-SDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATESPHSAGSYRQD

Query:  AQKMQHVSSSLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKA
               + S+  MH + L Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ LG+ P +G P  R  LP+++AQ+PV+VNAKQY+GILRRR+ARAKA
Subjt:  AQKMQHVSSSLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKA

Query:  EAEKKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDNVNQSGYHLN-DGSEQ
        E E+K+I+ RKPYLHESRH+HA+RR R SGGRFAKK+E +  E       + G   N  GSEQ
Subjt:  EAEKKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDNVNQSGYHLN-DGSEQ

AT5G12840.4 nuclear factor Y, subunit A13.4e-5149.06Show/hide
Query:  MQSKSETNNQLE-SDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATESPHSAGSYRQD
        MQSK    N+ E ++ +      +Y EPWW+   +  +P     G  S+S+SL+ PN GSESND  S S +  +N E D   K+ QA      A S R D
Subjt:  MQSKSETNNQLE-SDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATESPHSAGSYRQD

Query:  AQKMQ--HVSSSLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARA
           M+    + S+  MH + L Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ LG+ P +G P  R  LP+++AQ+PV+VNAKQY+GILRRR+ARA
Subjt:  AQKMQ--HVSSSLPAMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARA

Query:  KAEAEKKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDNVNQSGYHLN-DGSEQ
        KAE E+K+I+ RKPYLHESRH+HA+RR R SGGRFAKK+E +  E       + G   N  GSEQ
Subjt:  KAEAEKKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKNEADGKEMHSDNVNQSGYHLN-DGSEQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTCAAAATCTGAAACCAATAATCAGCTTGAATCTGATCCAAATGGTGCTCCATCCACGAGTATCTATTATGAACCCTGGTGGCGTGGTATTGGGTACAATCCTAT
TCCATTACCTGTGGTAGGGGGAAATGCTTCCAGTTCAACTTCTCTTGAATTCCCTAATGGTGGTTCAGAGTCAAATGACGGCCAGTCTGTGTCTAATAACGACGTAAATG
ACGAAGAAGATGATGTTTCCAAAGAAGTGCAAGCTACTGAATCTCCACATTCCGCTGGAAGCTACAGACAGGATGCTCAGAAGATGCAGCATGTTTCATCCTCTTTACCA
GCTATGCACGGTGAATGTCTGACGCAGTCTACACAACTCGAACTTGTTGGTCACTCTATTGCATGTGCATCAAATCCATATCAGGATCCATATTATGGAGGAATGATGGC
TTTCTATGGCCATCAGCCATTGGGCTACCCTATGGTTGGAGCGCCACATGCTAGAATGCCGTTGCCCATTGAGATAGCACAGGACCCCGTTTTCGTGAATGCGAAGCAGT
ACCAAGGAATTTTGAGGCGAAGGCAAGCACGTGCAAAAGCTGAGGCTGAGAAGAAGTTGATAAAAGCCAGAAAGCCATACCTTCATGAGTCTAGACACCAGCACGCCATA
AGAAGGACGAGGGGTAGTGGAGGGCGTTTCGCCAAGAAAAACGAAGCTGATGGAAAGGAGATGCATTCTGATAACGTAAACCAGAGTGGTTACCACCTAAACGATGGTTC
TGAACAGCAGAATGGAAGCTCCTTGACGAACAAGGCCTCTGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAGTCAAAATCTGAAACCAATAATCAGCTTGAATCTGATCCAAATGGTGCTCCATCCACGAGTATCTATTATGAACCCTGGTGGCGTGGTATTGGGTACAATCCTAT
TCCATTACCTGTGGTAGGGGGAAATGCTTCCAGTTCAACTTCTCTTGAATTCCCTAATGGTGGTTCAGAGTCAAATGACGGCCAGTCTGTGTCTAATAACGACGTAAATG
ACGAAGAAGATGATGTTTCCAAAGAAGTGCAAGCTACTGAATCTCCACATTCCGCTGGAAGCTACAGACAGGATGCTCAGAAGATGCAGCATGTTTCATCCTCTTTACCA
GCTATGCACGGTGAATGTCTGACGCAGTCTACACAACTCGAACTTGTTGGTCACTCTATTGCATGTGCATCAAATCCATATCAGGATCCATATTATGGAGGAATGATGGC
TTTCTATGGCCATCAGCCATTGGGCTACCCTATGGTTGGAGCGCCACATGCTAGAATGCCGTTGCCCATTGAGATAGCACAGGACCCCGTTTTCGTGAATGCGAAGCAGT
ACCAAGGAATTTTGAGGCGAAGGCAAGCACGTGCAAAAGCTGAGGCTGAGAAGAAGTTGATAAAAGCCAGAAAGCCATACCTTCATGAGTCTAGACACCAGCACGCCATA
AGAAGGACGAGGGGTAGTGGAGGGCGTTTCGCCAAGAAAAACGAAGCTGATGGAAAGGAGATGCATTCTGATAACGTAAACCAGAGTGGTTACCACCTAAACGATGGTTC
TGAACAGCAGAATGGAAGCTCCTTGACGAACAAGGCCTCTGAGTAG
Protein sequenceShow/hide protein sequence
MQSKSETNNQLESDPNGAPSTSIYYEPWWRGIGYNPIPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATESPHSAGSYRQDAQKMQHVSSSLP
AMHGECLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKKLIKARKPYLHESRHQHAI
RRTRGSGGRFAKKNEADGKEMHSDNVNQSGYHLNDGSEQQNGSSLTNKASE