; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0034893 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0034893
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr3:12104073..12104879
RNA-Seq ExpressionLag0034893
SyntenyLag0034893
Gene Ontology termsNA
InterPro domainsIPR028919 - Viral movement protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588193.1 hypothetical protein SDJN03_16758, partial [Cucurbita argyrosperma subsp. sororia]1.8e-3841.06Show/hide
Query:  RSCSSKFVGDHSLEDEE--CVEKGK-KLVKWKMPKVSTHKIFEERRKNLF-NFSSDPSIRTTEGKLSFGNGGGAFKLYTQNPSFSFGGKGNSKMNIGLVQ
        RS  SK    H+L+ +E   VEKGK  L+ W +P + T KI+   + NLF +FS +  ++T EG     NGGG   L  ++            ++IG+VQ
Subjt:  RSCSSKFVGDHSLEDEE--CVEKGK-KLVKWKMPKVSTHKIFEERRKNLF-NFSSDPSIRTTEGKLSFGNGGGAFKLYTQNPSFSFGGKGNSKMNIGLVQ

Query:  IGVKTLTRKIPSNASIVVCVRDNRVEKVQDSLIALVESKLRDGPFYFNVFPNTNLSLFGLFSIANVLSGHVLIRGFDQLPQGSEPVVLTCRTCYKLNPNN
        IGVK LTR  P NA +++C+RD R   +QDSL+ +VE+ L+DGP YFNVFPN   SL     + ++L  +  +R F+QLP+G + +V+  R CYK+    
Subjt:  IGVKTLTRKIPSNASIVVCVRDNRVEKVQDSLIALVESKLRDGPFYFNVFPNTNLSLFGLFSIANVLSGHVLIRGFDQLPQGSEPVVLTCRTCYKLNPNN

Query:  FGPEALLESPV-GKTVFFQTEILGESNDVVQKVTMWDQVQLPSDWP
             LL++P  G+T+FFQT+     ND  Q VT+W++VQLP +WP
Subjt:  FGPEALLESPV-GKTVFFQTEILGESNDVVQKVTMWDQVQLPSDWP

KAG6590198.1 hypothetical protein SDJN03_15621, partial [Cucurbita argyrosperma subsp. sororia]4.1e-9971.43Show/hide
Query:  MANFFRSCSSKFVGDHSLEDEECVEKGKKLVKWKMPKVSTHKIFE-ERRKNLFNFSS--DPSIRTTEGKLSFGNGGGAFKLYTQNPSFSFGGKGN--SKM
        M+ FFRSCSSKFV DHSLEDEE VEKG  LVKW MP V  HK++E + +K LF FS+  D SIR TEG++SFGNGGG+FKLY Q PS S+G KG   S M
Subjt:  MANFFRSCSSKFVGDHSLEDEECVEKGKKLVKWKMPKVSTHKIFE-ERRKNLFNFSS--DPSIRTTEGKLSFGNGGGAFKLYTQNPSFSFGGKGN--SKM

Query:  NIGLVQIGVKTLTRKIPSNASIVVCVRDNRVEKVQDSLIALVESKLRDGPFYFNVFPNTNLSLFGLFSIANVLSGHVLIRGFDQLPQGSEPVVLTCRTCY
        NIGLVQIGVKT+TRKIPSNASI++CVRDNR+EKV+DS+IA+VESKL DGPFYFNVFPN N SLF    I NVLS HVL++GFDQL +GSEP+V++CRTCY
Subjt:  NIGLVQIGVKTLTRKIPSNASIVVCVRDNRVEKVQDSLIALVESKLRDGPFYFNVFPNTNLSLFGLFSIANVLSGHVLIRGFDQLPQGSEPVVLTCRTCY

Query:  KLNPNNFGPEALLESPVGKTVFFQTEILGESN-------DVVQKVTMWDQVQLPSDWPPQLHITRF
        KLN   FGPEALLESPVGKTVFFQT+I+G+ N       DVVQKVT WDQVQLPS+WPPQLHI +F
Subjt:  KLNPNNFGPEALLESPVGKTVFFQTEILGESN-------DVVQKVTMWDQVQLPSDWPPQLHITRF

KGN66493.1 hypothetical protein Csa_007053 [Cucumis sativus]4.5e-9869.49Show/hide
Query:  MANFFRSCSSK-FVGDHSLEDEECVEKGKKLVKWKMPKVSTHKIFEERRKN---LFNFSSDPSIRTTEGKLSFGNGGGAFKLYTQNPSFSFGGKGNS---
        M+ FF+SCSSK FVGDHSLE+EE VEKGK LVKWKMP+V  HKI+EERRKN   +F   +DPSIRTTEG++SFGN GG+FKLY Q PS     +  S   
Subjt:  MANFFRSCSSK-FVGDHSLEDEECVEKGKKLVKWKMPKVSTHKIFEERRKN---LFNFSSDPSIRTTEGKLSFGNGGGAFKLYTQNPSFSFGGKGNS---

Query:  KMNIGLVQIGVKTLTRKIPSNASIVVCVRDNRVEKVQDSLIALVESKLRDGPFYFNVFPNTNLSLFGLFSIANVLSGHVLIRGFDQLPQGSEPVVLTCRT
         MNIGLVQIGVKTLT+KIP NASI++C+RDNR+EK++DSL+ALVESKL DGPFYFNVFPN NLSLF   SI NVLS HVL++G D++P+GS P+V+TCRT
Subjt:  KMNIGLVQIGVKTLTRKIPSNASIVVCVRDNRVEKVQDSLIALVESKLRDGPFYFNVFPNTNLSLFGLFSIANVLSGHVLIRGFDQLPQGSEPVVLTCRT

Query:  CYKLNPNNFGPEALLESPVGKTVFFQTEIL-GESNDVVQKVTMWDQVQLPSDWPPQLHITRFDPKVIFGSKK
        CYKLN N+FG EAL+ESPVGKTVFFQ EI   + +DVVQKVTMW+QVQLPSDWPP+LHI    P+++FGS K
Subjt:  CYKLNPNNFGPEALLESPVGKTVFFQTEIL-GESNDVVQKVTMWDQVQLPSDWPPQLHITRFDPKVIFGSKK

KGN66494.1 hypothetical protein Csa_006902 [Cucumis sativus]2.5e-4849.57Show/hide
Query:  GDHSLEDEECVEKGKKLVKWKMPKVSTHKIFEERRKNLFNFSSDPSIRTTEGKLSFGNGGGAFKLYTQNPSF-SFGGKG-NSKMNIGLVQIGVKTLTRKI
        G HSL+ EE ++KGK L+KWK+PK+ T KI+   + N F F SDP I+T E  +   NG   F+L + NP   +F  K   +++N+G++QIGVKTLT KI
Subjt:  GDHSLEDEECVEKGKKLVKWKMPKVSTHKIFEERRKNLFNFSSDPSIRTTEGKLSFGNGGGAFKLYTQNPSF-SFGGKG-NSKMNIGLVQIGVKTLTRKI

Query:  PSNASIVVCVRDNRVEKVQDSLIALVESKLRDGPFYFNVFPNTNLSLFGLFSIANVLSGHVLI---RGFDQLPQGSEPVVLTCRTCYKLNPNNFGPEALL
        PSNASI++CV D R +  +DS++ LVESKL DGP +FN+FPN  + +F       +L   VLI   +GF+QLPQG+ P+ L  RTCYKL  +   P AL+
Subjt:  PSNASIVVCVRDNRVEKVQDSLIALVESKLRDGPFYFNVFPNTNLSLFGLFSIANVLSGHVLI---RGFDQLPQGSEPVVLTCRTCYKLNPNNFGPEALL

Query:  ESPVGKTVFFQTEILGESNDVV-QKVTMWDQV
        ESP GKTVFFQT    E++ V  QKV+ WD+V
Subjt:  ESPVGKTVFFQTEILGESNDVV-QKVTMWDQV

XP_038880673.1 uncharacterized protein LOC120072292 [Benincasa hispida]3.0e-4144.67Show/hide
Query:  MANFFR-SCSSKF-VGDHSLEDEECVEKGKKLVKWKMPKVSTHKIFEERRKNLFNFSSDPSIRTTEGKLSFGNGGGAFKLYTQNP---SFSFGGKGNSKM
        MA  F+  CSS F  G H+L+ EE ++KG  L+KWK+PKV T KI+   ++N F F SDPSI+T E K+S  NG  AF+L  +NP   SF+   +  + +
Subjt:  MANFFR-SCSSKF-VGDHSLEDEECVEKGKKLVKWKMPKVSTHKIFEERRKNLFNFSSDPSIRTTEGKLSFGNGGGAFKLYTQNP---SFSFGGKGNSKM

Query:  NIGLVQIGVKTLTRKIPSNASIVVCVRDNRVEKVQDSLIALVESKLRDGPFYFNVFPNTNLSLFGLFSIANVLSGHVLIRGFDQLPQGSEPVVLTCRTCY
        N+G++QIGVK +T KIPSNASI++CV D+R E  +D+++ LVES L                                  GF+QLP+G+ P+ L  RTCY
Subjt:  NIGLVQIGVKTLTRKIPSNASIVVCVRDNRVEKVQDSLIALVESKLRDGPFYFNVFPNTNLSLFGLFSIANVLSGHVLIRGFDQLPQGSEPVVLTCRTCY

Query:  KLNPNNFGPEALLESPVGKTVFFQTEILGESNDVVQKVTMWDQV
        KL  +   P ALLESP GKTV+FQT+ L  S   VQKV+ WD+V
Subjt:  KLNPNNFGPEALLESPVGKTVFFQTEILGESNDVVQKVTMWDQV

TrEMBL top hitse value%identityAlignment
A0A0A0LXM3 Uncharacterized protein2.2e-9869.49Show/hide
Query:  MANFFRSCSSK-FVGDHSLEDEECVEKGKKLVKWKMPKVSTHKIFEERRKN---LFNFSSDPSIRTTEGKLSFGNGGGAFKLYTQNPSFSFGGKGNS---
        M+ FF+SCSSK FVGDHSLE+EE VEKGK LVKWKMP+V  HKI+EERRKN   +F   +DPSIRTTEG++SFGN GG+FKLY Q PS     +  S   
Subjt:  MANFFRSCSSK-FVGDHSLEDEECVEKGKKLVKWKMPKVSTHKIFEERRKN---LFNFSSDPSIRTTEGKLSFGNGGGAFKLYTQNPSFSFGGKGNS---

Query:  KMNIGLVQIGVKTLTRKIPSNASIVVCVRDNRVEKVQDSLIALVESKLRDGPFYFNVFPNTNLSLFGLFSIANVLSGHVLIRGFDQLPQGSEPVVLTCRT
         MNIGLVQIGVKTLT+KIP NASI++C+RDNR+EK++DSL+ALVESKL DGPFYFNVFPN NLSLF   SI NVLS HVL++G D++P+GS P+V+TCRT
Subjt:  KMNIGLVQIGVKTLTRKIPSNASIVVCVRDNRVEKVQDSLIALVESKLRDGPFYFNVFPNTNLSLFGLFSIANVLSGHVLIRGFDQLPQGSEPVVLTCRT

Query:  CYKLNPNNFGPEALLESPVGKTVFFQTEIL-GESNDVVQKVTMWDQVQLPSDWPPQLHITRFDPKVIFGSKK
        CYKLN N+FG EAL+ESPVGKTVFFQ EI   + +DVVQKVTMW+QVQLPSDWPP+LHI    P+++FGS K
Subjt:  CYKLNPNNFGPEALLESPVGKTVFFQTEIL-GESNDVVQKVTMWDQVQLPSDWPPQLHITRFDPKVIFGSKK

A0A0A0LZS0 Uncharacterized protein1.2e-4849.57Show/hide
Query:  GDHSLEDEECVEKGKKLVKWKMPKVSTHKIFEERRKNLFNFSSDPSIRTTEGKLSFGNGGGAFKLYTQNPSF-SFGGKG-NSKMNIGLVQIGVKTLTRKI
        G HSL+ EE ++KGK L+KWK+PK+ T KI+   + N F F SDP I+T E  +   NG   F+L + NP   +F  K   +++N+G++QIGVKTLT KI
Subjt:  GDHSLEDEECVEKGKKLVKWKMPKVSTHKIFEERRKNLFNFSSDPSIRTTEGKLSFGNGGGAFKLYTQNPSF-SFGGKG-NSKMNIGLVQIGVKTLTRKI

Query:  PSNASIVVCVRDNRVEKVQDSLIALVESKLRDGPFYFNVFPNTNLSLFGLFSIANVLSGHVLI---RGFDQLPQGSEPVVLTCRTCYKLNPNNFGPEALL
        PSNASI++CV D R +  +DS++ LVESKL DGP +FN+FPN  + +F       +L   VLI   +GF+QLPQG+ P+ L  RTCYKL  +   P AL+
Subjt:  PSNASIVVCVRDNRVEKVQDSLIALVESKLRDGPFYFNVFPNTNLSLFGLFSIANVLSGHVLI---RGFDQLPQGSEPVVLTCRTCYKLNPNNFGPEALL

Query:  ESPVGKTVFFQTEILGESNDVV-QKVTMWDQV
        ESP GKTVFFQT    E++ V  QKV+ WD+V
Subjt:  ESPVGKTVFFQTEILGESNDVV-QKVTMWDQV

A0A5A7U9X3 Polyprotein3.4e-3552.05Show/hide
Query:  NGGGAFKLYTQNPSF-SFGGKGNSKM-NIGLVQIGVKTLTRKIPSNASIVVCVRDNRVEKVQDSLIALVESKLRDGPFYFNVFPNTNLSLFGLFSIANVL
        NG  AF+L   NP   SF  K    M N+G++QIGVKTLT KI SNASI++CV D R +  +DS++ LVE+KL DGP +FN+FPN  +SLF    +   L
Subjt:  NGGGAFKLYTQNPSF-SFGGKGNSKM-NIGLVQIGVKTLTRKIPSNASIVVCVRDNRVEKVQDSLIALVESKLRDGPFYFNVFPNTNLSLFGLFSIANVL

Query:  SGHVLIRGFDQLPQGSEPVVLTCRTCYKLNPNNFGPEALLESPVGKTVFFQTEILGESNDVVQKVTMWDQV
            +++GF+QLPQG+ P+ L  RTCYKL  + F P AL+ESP GKTVFFQT+    S   VQKV+ WD+V
Subjt:  SGHVLIRGFDQLPQGSEPVVLTCRTCYKLNPNNFGPEALLESPVGKTVFFQTEILGESNDVVQKVTMWDQV

A0A5D3D5S0 Uncharacterized protein1.6e-2480.82Show/hide
Query:  TCYKLNPNNFGPEALLESPVGKTVFFQTEILGE-SNDVVQKVTMWDQVQLPSDWPPQLHITRFDPKVIFGSKK
        TCYKLN NNFG EAL+ESPVGKTVFFQTEI G+ S DVVQKVTMWDQVQLPSDWPPQL I  F PK++FGS K
Subjt:  TCYKLNPNNFGPEALLESPVGKTVFFQTEILGE-SNDVVQKVTMWDQVQLPSDWPPQLHITRFDPKVIFGSKK

A0A5D3D5V1 Polyprotein4.0e-3652.63Show/hide
Query:  NGGGAFKLYTQNPSF-SFGGKGNSKM-NIGLVQIGVKTLTRKIPSNASIVVCVRDNRVEKVQDSLIALVESKLRDGPFYFNVFPNTNLSLFGLFSIANVL
        NG  AF+L   NP   SF  K    M N+G++QIGVKTLT KIPSNASI++CV D R +  +DS++ LVE+KL DGP +FN+FPN  +SLF    +   L
Subjt:  NGGGAFKLYTQNPSF-SFGGKGNSKM-NIGLVQIGVKTLTRKIPSNASIVVCVRDNRVEKVQDSLIALVESKLRDGPFYFNVFPNTNLSLFGLFSIANVL

Query:  SGHVLIRGFDQLPQGSEPVVLTCRTCYKLNPNNFGPEALLESPVGKTVFFQTEILGESNDVVQKVTMWDQV
            +++GF+QLPQG+ P+ L  RTCYKL  + F P AL+ESP GKTVFFQT+    S   VQKV+ WD+V
Subjt:  SGHVLIRGFDQLPQGSEPVVLTCRTCYKLNPNNFGPEALLESPVGKTVFFQTEILGESNDVVQKVTMWDQV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAACTTTTTCAGGTCTTGTAGCTCCAAATTCGTCGGCGATCATTCTCTAGAAGATGAAGAATGTGTCGAAAAGGGAAAGAAATTGGTGAAATGGAAGATGCCAAA
AGTCTCAACTCACAAAATCTTCGAAGAAAGAAGAAAAAATCTCTTCAACTTCTCATCCGATCCTTCCATCAGAACCACAGAAGGCAAACTCAGCTTTGGAAATGGTGGAG
GAGCCTTCAAATTATACACTCAAAACCCTTCTTTTTCCTTTGGTGGCAAAGGAAACAGCAAAATGAACATAGGCCTCGTTCAAATTGGAGTCAAAACCCTCACCAGAAAG
ATCCCCTCGAACGCCTCGATCGTCGTGTGCGTTCGTGACAACAGAGTTGAAAAGGTTCAAGATTCGCTCATAGCCTTGGTGGAATCCAAGCTGAGAGATGGCCCATTTTA
CTTCAATGTTTTTCCAAACACAAACTTGTCTCTCTTTGGATTGTTTTCCATCGCTAATGTTTTGAGTGGCCATGTTTTGATCAGAGGGTTTGATCAGCTTCCACAAGGGT
CTGAGCCAGTTGTGCTGACATGTAGAACATGTTACAAGCTGAATCCAAACAACTTTGGACCGGAGGCTTTGCTTGAGAGTCCTGTTGGGAAGACTGTGTTTTTTCAGACA
GAGATTCTTGGAGAGTCCAATGATGTTGTTCAGAAGGTGACCATGTGGGACCAAGTTCAGTTGCCTTCTGATTGGCCTCCTCAGCTGCACATAACTAGGTTTGATCCTAA
AGTGATTTTTGGGTCCAAAAAGAGCGAGGGAAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAACTTTTTCAGGTCTTGTAGCTCCAAATTCGTCGGCGATCATTCTCTAGAAGATGAAGAATGTGTCGAAAAGGGAAAGAAATTGGTGAAATGGAAGATGCCAAA
AGTCTCAACTCACAAAATCTTCGAAGAAAGAAGAAAAAATCTCTTCAACTTCTCATCCGATCCTTCCATCAGAACCACAGAAGGCAAACTCAGCTTTGGAAATGGTGGAG
GAGCCTTCAAATTATACACTCAAAACCCTTCTTTTTCCTTTGGTGGCAAAGGAAACAGCAAAATGAACATAGGCCTCGTTCAAATTGGAGTCAAAACCCTCACCAGAAAG
ATCCCCTCGAACGCCTCGATCGTCGTGTGCGTTCGTGACAACAGAGTTGAAAAGGTTCAAGATTCGCTCATAGCCTTGGTGGAATCCAAGCTGAGAGATGGCCCATTTTA
CTTCAATGTTTTTCCAAACACAAACTTGTCTCTCTTTGGATTGTTTTCCATCGCTAATGTTTTGAGTGGCCATGTTTTGATCAGAGGGTTTGATCAGCTTCCACAAGGGT
CTGAGCCAGTTGTGCTGACATGTAGAACATGTTACAAGCTGAATCCAAACAACTTTGGACCGGAGGCTTTGCTTGAGAGTCCTGTTGGGAAGACTGTGTTTTTTCAGACA
GAGATTCTTGGAGAGTCCAATGATGTTGTTCAGAAGGTGACCATGTGGGACCAAGTTCAGTTGCCTTCTGATTGGCCTCCTCAGCTGCACATAACTAGGTTTGATCCTAA
AGTGATTTTTGGGTCCAAAAAGAGCGAGGGAAAGTAA
Protein sequenceShow/hide protein sequence
MANFFRSCSSKFVGDHSLEDEECVEKGKKLVKWKMPKVSTHKIFEERRKNLFNFSSDPSIRTTEGKLSFGNGGGAFKLYTQNPSFSFGGKGNSKMNIGLVQIGVKTLTRK
IPSNASIVVCVRDNRVEKVQDSLIALVESKLRDGPFYFNVFPNTNLSLFGLFSIANVLSGHVLIRGFDQLPQGSEPVVLTCRTCYKLNPNNFGPEALLESPVGKTVFFQT
EILGESNDVVQKVTMWDQVQLPSDWPPQLHITRFDPKVIFGSKKSEGK