; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0034895 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0034895
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr3:12115008..12115745
RNA-Seq ExpressionLag0034895
SyntenyLag0034895
Gene Ontology termsNA
InterPro domainsIPR028919 - Viral movement protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051217.1 polyprotein [Cucumis melo var. makuwa]2.3e-6472.83Show/hide
Query:  CGNGSQAFNLISQNPFMAGV----FNDKLNVGLIQIGVKTLTTKIPSNASIILCVFDTRVDKFEDSILGMVESNLSDGPLYFNVFPNITMSLFNPKLLDA
        C NGSQAF LI  NP +A      F   LN+G+IQIGVKTLTTKI SNASIILCVFDTR D FEDSILG+VE+ LSDGP++FN+FPNITMSLF+PKL ++
Subjt:  CGNGSQAFNLISQNPFMAGV----FNDKLNVGLIQIGVKTLTTKIPSNASIILCVFDTRVDKFEDSILGMVESNLSDGPLYFNVFPNITMSLFNPKLLDA

Query:  LALIVVVRGFEQLPAGTRPISVVWRTCYKLQGTDLPEALLESPQGKTVFFQTDFESSDVAVQKVSKWDEVACK
        L LI +V+GFEQLP GT PIS++WRTCYKLQG+  P AL+ESPQGKTVFFQTDFE+S VAVQKVS+WDEV CK
Subjt:  LALIVVVRGFEQLPAGTRPISVVWRTCYKLQGTDLPEALLESPQGKTVFFQTDFESSDVAVQKVSKWDEVACK

KAG6588194.1 hypothetical protein SDJN03_16759, partial [Cucurbita argyrosperma subsp. sororia]9.9e-6856.18Show/hide
Query:  MPTFLKPCWSSNL--GGESHALDSEEYIKKGNNLLNWKIPKVPTAKIYKRKPFTFFSDRSIKTKEEQISCGNGSQAFNLISQNPFMAGV----FNDKLNV
        M TFLKPCWSS    GG+ HALD+EE+IKKGNNLLNWKIPKVPT+KIYK  PF F SD SIKTK+ +++CGNG+QA +LI ++PF+A +    F    NV
Subjt:  MPTFLKPCWSSNL--GGESHALDSEEYIKKGNNLLNWKIPKVPTAKIYKRKPFTFFSDRSIKTKEEQISCGNGSQAFNLISQNPFMAGV----FNDKLNV

Query:  GLIQIGVKTLTTKIPSNASIILCVFDTRVDKFEDSILGMVESNLSDGPLYFNVFPNITMSLFNPKLLDALALIVVVRGFEQLPAGTRPISVVWRTCYKLQ
        G+IQIG KTLT KIP NA+I LCVFDTR +KFEDSILGMVE+ L                                         T+PI + WRTCYKLQ
Subjt:  GLIQIGVKTLTTKIPSNASIILCVFDTRVDKFEDSILGMVESNLSDGPLYFNVFPNITMSLFNPKLLDALALIVVVRGFEQLPAGTRPISVVWRTCYKLQ

Query:  GTDLPEALLESPQGKTVFFQTDFESSDVAVQKVSKWDEVACKVMNSILSEK
         + L EAL+ES  G+TVFFQTDFE+SDVAV KVS WD+V CKV++   SEK
Subjt:  GTDLPEALLESPQGKTVFFQTDFESSDVAVQKVSKWDEVACKVMNSILSEK

KGN66494.1 hypothetical protein Csa_006902 [Cucumis sativus]2.3e-9370.73Show/hide
Query:  MPTFLKPCWSSNLGGESHALDSEEYIKKGNNLLNWKIPKVPTAKIYKRKPFTFFSDRSIKTKEEQISCGNGSQAFNLISQNP----FMAGVFNDKLNVGL
        M TF   CWSSN GG SH+LDSEEYIKKG NLL WKIPK+PT KIYK  PF FFSD  IKTKEE + C NGSQ F LIS NP    F    F  +LN+G+
Subjt:  MPTFLKPCWSSNLGGESHALDSEEYIKKGNNLLNWKIPKVPTAKIYKRKPFTFFSDRSIKTKEEQISCGNGSQAFNLISQNP----FMAGVFNDKLNVGL

Query:  IQIGVKTLTTKIPSNASIILCVFDTRVDKFEDSILGMVESNLSDGPLYFNVFPNITMSLFNPKLLDALALIVVVRGFEQLPAGTRPISVVWRTCYKLQGT
        IQIGVKTLTTKIPSNASIILCVFDTR D FEDSILG+VES L DGP++FN+FPNITM +F+PKLL++  LI +V+GFEQLP GT PIS++WRTCYKLQ +
Subjt:  IQIGVKTLTTKIPSNASIILCVFDTRVDKFEDSILGMVESNLSDGPLYFNVFPNITMSLFNPKLLDALALIVVVRGFEQLPAGTRPISVVWRTCYKLQGT

Query:  DLPEALLESPQGKTVFFQTDFESSDVAVQKVSKWDEVACKVMNSIL
         LP AL+ESPQGKTVFFQT+FE+S VA QKVS+WDEV CKV N+I+
Subjt:  DLPEALLESPQGKTVFFQTDFESSDVAVQKVSKWDEVACKVMNSIL

TYK18873.1 polyprotein [Cucumis melo var. makuwa]2.7e-6573.41Show/hide
Query:  CGNGSQAFNLISQNPFMAGV----FNDKLNVGLIQIGVKTLTTKIPSNASIILCVFDTRVDKFEDSILGMVESNLSDGPLYFNVFPNITMSLFNPKLLDA
        C NGSQAF LI  NP +A      F   LN+G+IQIGVKTLTTKIPSNASIILCVFDTR D FEDSILG+VE+ LSDGP++FN+FPNITMSLF+PKL ++
Subjt:  CGNGSQAFNLISQNPFMAGV----FNDKLNVGLIQIGVKTLTTKIPSNASIILCVFDTRVDKFEDSILGMVESNLSDGPLYFNVFPNITMSLFNPKLLDA

Query:  LALIVVVRGFEQLPAGTRPISVVWRTCYKLQGTDLPEALLESPQGKTVFFQTDFESSDVAVQKVSKWDEVACK
        L LI +V+GFEQLP GT PIS++WRTCYKLQG+  P AL+ESPQGKTVFFQTDFE+S VAVQKVS+WDEV CK
Subjt:  LALIVVVRGFEQLPAGTRPISVVWRTCYKLQGTDLPEALLESPQGKTVFFQTDFESSDVAVQKVSKWDEVACK

XP_038880673.1 uncharacterized protein LOC120072292 [Benincasa hispida]1.3e-8065.18Show/hide
Query:  MPTFLKPCWSSNLGGESHALDSEEYIKKGNNLLNWKIPKVPTAKIYKRKPFTFFSDRSIKTKEEQISCGNGSQAFNLISQNPFMAGVFNDK-----LNVG
        M T  KPC SSN GG SHALDSEEYIKKGNNLL WKIPKVPT KIYKR PFTFFSD SIKT+EE++SC NGSQAF LI++NP MA  FND      +NVG
Subjt:  MPTFLKPCWSSNLGGESHALDSEEYIKKGNNLLNWKIPKVPTAKIYKRKPFTFFSDRSIKTKEEQISCGNGSQAFNLISQNPFMAGVFNDK-----LNVG

Query:  LIQIGVKTLTTKIPSNASIILCVFDTRVDKFEDSILGMVESNLSDGPLYFNVFPNITMSLFNPKLLDALALIVVVRGFEQLPAGTRPISVVWRTCYKLQG
        +IQIGVK +TTKIPSNASIILCVFD+R + FED+ILG+VESNL                                 GFEQLP GTRPIS++WRTCYKLQ 
Subjt:  LIQIGVKTLTTKIPSNASIILCVFDTRVDKFEDSILGMVESNLSDGPLYFNVFPNITMSLFNPKLLDALALIVVVRGFEQLPAGTRPISVVWRTCYKLQG

Query:  TDLPEALLESPQGKTVFFQTDFESSDVAVQKVSKWDEVACKVMNSIL
        + LP ALLESPQGKTV+FQTD ++S VAVQKVSKWDEV CK+ N I+
Subjt:  TDLPEALLESPQGKTVFFQTDFESSDVAVQKVSKWDEVACKVMNSIL

TrEMBL top hitse value%identityAlignment
A0A0A0LXM3 Uncharacterized protein2.1e-5549.8Show/hide
Query:  MPTFLKPCWSSNLGGESHALDSEEYIKKGNNLLNWKIPKVPTAKIY-KRKPFTFF-----SDRSIKTKEEQISCGNGSQAFNLISQNPF-----MAGVFN
        M  F K C S N  G+ H+L+ EEY++KG +L+ WK+P+VP  KIY +R+   FF     +D SI+T E QIS GN   +F L  Q P          F 
Subjt:  MPTFLKPCWSSNLGGESHALDSEEYIKKGNNLLNWKIPKVPTAKIY-KRKPFTFF-----SDRSIKTKEEQISCGNGSQAFNLISQNPF-----MAGVFN

Query:  DKLNVGLIQIGVKTLTTKIPSNASIILCVFDTRVDKFEDSILGMVESNLSDGPLYFNVFPNITMSLFNPKLLDALALIVVVRGFEQLPAGTRPISVVWRT
        + +N+GL+QIGVKTLT KIP NASIILC+ D R++K EDS+L +VES L DGP YFNVFPNI +SLF   + + L++ V+V+G +++P G+ PI V  RT
Subjt:  DKLNVGLIQIGVKTLTTKIPSNASIILCVFDTRVDKFEDSILGMVESNLSDGPLYFNVFPNITMSLFNPKLLDALALIVVVRGFEQLPAGTRPISVVWRT

Query:  CYKLQGTDL-PEALLESPQGKTVFFQTDF--ESSDVAVQKVSKWDEV
        CYKL   D   EAL+ESP GKTVFFQ +   +  D  VQKV+ W++V
Subjt:  CYKLQGTDL-PEALLESPQGKTVFFQTDF--ESSDVAVQKVSKWDEV

A0A0A0LZS0 Uncharacterized protein1.1e-9370.73Show/hide
Query:  MPTFLKPCWSSNLGGESHALDSEEYIKKGNNLLNWKIPKVPTAKIYKRKPFTFFSDRSIKTKEEQISCGNGSQAFNLISQNP----FMAGVFNDKLNVGL
        M TF   CWSSN GG SH+LDSEEYIKKG NLL WKIPK+PT KIYK  PF FFSD  IKTKEE + C NGSQ F LIS NP    F    F  +LN+G+
Subjt:  MPTFLKPCWSSNLGGESHALDSEEYIKKGNNLLNWKIPKVPTAKIYKRKPFTFFSDRSIKTKEEQISCGNGSQAFNLISQNP----FMAGVFNDKLNVGL

Query:  IQIGVKTLTTKIPSNASIILCVFDTRVDKFEDSILGMVESNLSDGPLYFNVFPNITMSLFNPKLLDALALIVVVRGFEQLPAGTRPISVVWRTCYKLQGT
        IQIGVKTLTTKIPSNASIILCVFDTR D FEDSILG+VES L DGP++FN+FPNITM +F+PKLL++  LI +V+GFEQLP GT PIS++WRTCYKLQ +
Subjt:  IQIGVKTLTTKIPSNASIILCVFDTRVDKFEDSILGMVESNLSDGPLYFNVFPNITMSLFNPKLLDALALIVVVRGFEQLPAGTRPISVVWRTCYKLQGT

Query:  DLPEALLESPQGKTVFFQTDFESSDVAVQKVSKWDEVACKVMNSIL
         LP AL+ESPQGKTVFFQT+FE+S VA QKVS+WDEV CKV N+I+
Subjt:  DLPEALLESPQGKTVFFQTDFESSDVAVQKVSKWDEVACKVMNSIL

A0A2G9HQU0 Uncharacterized protein2.6e-2938.76Show/hide
Query:  LLNWKIPKVPTAKIYKRKPFTFFSDRSIKTKEEQISCGNGSQAFNLISQNPFMAGVFNDK-LNVGLIQIGVKTLTTKIPSNASIILCVFDTRVDKFEDSI
        L NWK+P+  TA+IYK K F F SD  +K  EE I    G + F ++S+    +     K L++G+ Q+G+K L T++  NAS ++ V D R ++FEDS+
Subjt:  LLNWKIPKVPTAKIYKRKPFTFFSDRSIKTKEEQISCGNGSQAFNLISQNPFMAGVFNDK-LNVGLIQIGVKTLTTKIPSNASIILCVFDTRVDKFEDSI

Query:  LGMVESNLSDGPLYFNVFPNITMSLFNPKLLDALALIVVVRGFEQLPAGTRPISVVWRTCYKLQGTDL------PEALLESPQGKTVFFQTDFESSDVAV
        LG+VES+L + P+YF  FPN T+SL +P +L AL L +   GF+ L  GT  +++V+R CYK+    +      PE  ++  +  T  F T+ E S++ V
Subjt:  LGMVESNLSDGPLYFNVFPNITMSLFNPKLLDALALIVVVRGFEQLPAGTRPISVVWRTCYKLQGTDL------PEALLESPQGKTVFFQTDFESSDVAV

Query:  QKVSKWDEV
         K   W++V
Subjt:  QKVSKWDEV

A0A5A7U9X3 Polyprotein1.1e-6472.83Show/hide
Query:  CGNGSQAFNLISQNPFMAGV----FNDKLNVGLIQIGVKTLTTKIPSNASIILCVFDTRVDKFEDSILGMVESNLSDGPLYFNVFPNITMSLFNPKLLDA
        C NGSQAF LI  NP +A      F   LN+G+IQIGVKTLTTKI SNASIILCVFDTR D FEDSILG+VE+ LSDGP++FN+FPNITMSLF+PKL ++
Subjt:  CGNGSQAFNLISQNPFMAGV----FNDKLNVGLIQIGVKTLTTKIPSNASIILCVFDTRVDKFEDSILGMVESNLSDGPLYFNVFPNITMSLFNPKLLDA

Query:  LALIVVVRGFEQLPAGTRPISVVWRTCYKLQGTDLPEALLESPQGKTVFFQTDFESSDVAVQKVSKWDEVACK
        L LI +V+GFEQLP GT PIS++WRTCYKLQG+  P AL+ESPQGKTVFFQTDFE+S VAVQKVS+WDEV CK
Subjt:  LALIVVVRGFEQLPAGTRPISVVWRTCYKLQGTDLPEALLESPQGKTVFFQTDFESSDVAVQKVSKWDEVACK

A0A5D3D5V1 Polyprotein1.3e-6573.41Show/hide
Query:  CGNGSQAFNLISQNPFMAGV----FNDKLNVGLIQIGVKTLTTKIPSNASIILCVFDTRVDKFEDSILGMVESNLSDGPLYFNVFPNITMSLFNPKLLDA
        C NGSQAF LI  NP +A      F   LN+G+IQIGVKTLTTKIPSNASIILCVFDTR D FEDSILG+VE+ LSDGP++FN+FPNITMSLF+PKL ++
Subjt:  CGNGSQAFNLISQNPFMAGV----FNDKLNVGLIQIGVKTLTTKIPSNASIILCVFDTRVDKFEDSILGMVESNLSDGPLYFNVFPNITMSLFNPKLLDA

Query:  LALIVVVRGFEQLPAGTRPISVVWRTCYKLQGTDLPEALLESPQGKTVFFQTDFESSDVAVQKVSKWDEVACK
        L LI +V+GFEQLP GT PIS++WRTCYKLQG+  P AL+ESPQGKTVFFQTDFE+S VAVQKVS+WDEV CK
Subjt:  LALIVVVRGFEQLPAGTRPISVVWRTCYKLQGTDLPEALLESPQGKTVFFQTDFESSDVAVQKVSKWDEVACK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAACTTTTTTGAAACCCTGTTGGAGTTCAAACCTTGGAGGAGAAAGCCATGCTTTAGACAGTGAAGAATACATAAAAAAAGGCAACAATCTATTGAATTGGAAGAT
CCCAAAAGTTCCCACAGCCAAAATCTACAAAAGAAAGCCATTCACTTTCTTCTCCGACCGATCCATCAAAACCAAAGAAGAGCAAATCTCTTGTGGCAATGGCAGCCAAG
CTTTCAACTTGATATCTCAAAACCCCTTCATGGCTGGTGTGTTCAACGACAAGTTGAATGTCGGGCTGATCCAAATCGGAGTCAAAACTTTGACCACAAAAATCCCCTCC
AATGCCTCGATTATTCTGTGTGTTTTCGACACTCGAGTTGACAAGTTTGAGGATTCGATTTTGGGGATGGTGGAATCGAATTTGAGTGATGGGCCTCTGTACTTCAATGT
TTTTCCAAACATTACGATGTCTTTGTTTAATCCTAAGTTGTTGGATGCCTTGGCTTTGATTGTCGTCGTTCGGGGCTTTGAGCAGCTTCCTGCAGGGACAAGACCAATCA
GTGTCGTGTGGAGGACTTGTTACAAGCTGCAAGGCACTGATTTGCCTGAGGCCTTGCTTGAGAGTCCACAAGGGAAGACTGTGTTTTTTCAGACAGATTTTGAGAGTTCC
GATGTTGCTGTTCAGAAGGTTTCAAAATGGGATGAAGTTGCTTGCAAAGTGATGAACTCAATTCTCTCTGAGAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCAACTTTTTTGAAACCCTGTTGGAGTTCAAACCTTGGAGGAGAAAGCCATGCTTTAGACAGTGAAGAATACATAAAAAAAGGCAACAATCTATTGAATTGGAAGAT
CCCAAAAGTTCCCACAGCCAAAATCTACAAAAGAAAGCCATTCACTTTCTTCTCCGACCGATCCATCAAAACCAAAGAAGAGCAAATCTCTTGTGGCAATGGCAGCCAAG
CTTTCAACTTGATATCTCAAAACCCCTTCATGGCTGGTGTGTTCAACGACAAGTTGAATGTCGGGCTGATCCAAATCGGAGTCAAAACTTTGACCACAAAAATCCCCTCC
AATGCCTCGATTATTCTGTGTGTTTTCGACACTCGAGTTGACAAGTTTGAGGATTCGATTTTGGGGATGGTGGAATCGAATTTGAGTGATGGGCCTCTGTACTTCAATGT
TTTTCCAAACATTACGATGTCTTTGTTTAATCCTAAGTTGTTGGATGCCTTGGCTTTGATTGTCGTCGTTCGGGGCTTTGAGCAGCTTCCTGCAGGGACAAGACCAATCA
GTGTCGTGTGGAGGACTTGTTACAAGCTGCAAGGCACTGATTTGCCTGAGGCCTTGCTTGAGAGTCCACAAGGGAAGACTGTGTTTTTTCAGACAGATTTTGAGAGTTCC
GATGTTGCTGTTCAGAAGGTTTCAAAATGGGATGAAGTTGCTTGCAAAGTGATGAACTCAATTCTCTCTGAGAAGTAA
Protein sequenceShow/hide protein sequence
MPTFLKPCWSSNLGGESHALDSEEYIKKGNNLLNWKIPKVPTAKIYKRKPFTFFSDRSIKTKEEQISCGNGSQAFNLISQNPFMAGVFNDKLNVGLIQIGVKTLTTKIPS
NASIILCVFDTRVDKFEDSILGMVESNLSDGPLYFNVFPNITMSLFNPKLLDALALIVVVRGFEQLPAGTRPISVVWRTCYKLQGTDLPEALLESPQGKTVFFQTDFESS
DVAVQKVSKWDEVACKVMNSILSEK