; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0034896 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0034896
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr3:12117455..12118210
RNA-Seq ExpressionLag0034896
SyntenyLag0034896
Gene Ontology termsNA
InterPro domainsIPR028919 - Viral movement protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6590198.1 hypothetical protein SDJN03_15621, partial [Cucurbita argyrosperma subsp. sororia]1.1e-5650.8Show/hide
Query:  MSQLFTKCCSSKSRNHALDSQEYMKKGNNLLAWKMPKVPTTKLYKRSNKFSFFA----SDPSIKIREARASFGNGNRAMGLINENPIINDFQDRFYSMFN
        MS  F  C S    +H+L+ +EY++KGNNL+ W MP VP  KLY+   K   F      D SI+I E + SFGNG  +  L  + P     + +FYS+ N
Subjt:  MSQLFTKCCSSKSRNHALDSQEYMKKGNNLLAWKMPKVPTTKLYKRSNKFSFFA----SDPSIKIREARASFGNGNRAMGLINENPIINDFQDRFYSMFN

Query:  VGLVQIGVKTLTKKIPQNASITLIVRDTRHDKMEDSILGLVEANLGDGPLYFNVFPNMTMSAFDPKL-YGVLVVNVIVEGFEQLPVGVEPINLMVRTVYK
        +GLVQIGVKT+T+KIP NASI L VRD R +K+EDSI+ +VE+ LGDGP YFNVFPNM  S F+  L   VL V+V+V+GF+QL  G EPI +  RT YK
Subjt:  VGLVQIGVKTLTKKIPQNASITLIVRDTRHDKMEDSILGLVEANLGDGPLYFNVFPNMTMSAFDPKL-YGVLVVNVIVEGFEQLPVGVEPINLMVRTVYK

Query:  L-QSDVEPSALLESPDGKTVFFQTDV--------EGSNETVQRVTDWDEV
        L Q+   P ALLESP GKTVFFQT +         G  + VQ+VT WD+V
Subjt:  L-QSDVEPSALLESPDGKTVFFQTDV--------EGSNETVQRVTDWDEV

KGN66493.1 hypothetical protein Csa_007053 [Cucumis sativus]7.0e-5349.59Show/hide
Query:  LFTKCCSSKS--RNHALDSQEYMKKGNNLLAWKMPKVPTTKLY--KRSNKFSFFAS--DPSIKIREARASFGNGNRAMGLINENPIINDFQDR--FYSMF
        LF K CSSK+   +H+L+ +EY++KG +L+ WKMP+VP  K+Y  +R N F  F S  DPSI+  E + SFGN   +  L  + P     + R  F++  
Subjt:  LFTKCCSSKS--RNHALDSQEYMKKGNNLLAWKMPKVPTTKLY--KRSNKFSFFAS--DPSIKIREARASFGNGNRAMGLINENPIINDFQDR--FYSMF

Query:  NVGLVQIGVKTLTKKIPQNASITLIVRDTRHDKMEDSILGLVEANLGDGPLYFNVFPNMTMSAFDPKLYGVLVVNVIVEGFEQLPVGVEPINLMVRTVYK
        N+GLVQIGVKTLTKKIP NASI L +RD R +K+EDS+L LVE+ LGDGP YFNVFPN+ +S F   +  VL V+V+V+G +++P G  PI +  RT YK
Subjt:  NVGLVQIGVKTLTKKIPQNASITLIVRDTRHDKMEDSILGLVEANLGDGPLYFNVFPNMTMSAFDPKLYGVLVVNVIVEGFEQLPVGVEPINLMVRTVYK

Query:  L-QSDVEPSALLESPDGKTVFFQTDV--EGSNETVQRVTDWDEV
        L Q+D    AL+ESP GKTVFFQ ++  +  ++ VQ+VT W++V
Subjt:  L-QSDVEPSALLESPDGKTVFFQTDV--EGSNETVQRVTDWDEV

KGN66494.1 hypothetical protein Csa_006902 [Cucumis sativus]5.6e-6657.87Show/hide
Query:  TKCCSSK--SRNHALDSQEYMKKGNNLLAWKMPKVPTTKLYKRSNKFSFFASDPSIKIREARASFGNGNRAMGLINENPIINDFQD-RFYSMFNVGLVQI
        T C SS     +H+LDS+EY+KKG NLL WK+PK+PTTK+YK SN F FF SDP IK +E      NG++   LI+ NP++++FQ+ RFY+  N+G++QI
Subjt:  TKCCSSK--SRNHALDSQEYMKKGNNLLAWKMPKVPTTKLYKRSNKFSFFASDPSIKIREARASFGNGNRAMGLINENPIINDFQD-RFYSMFNVGLVQI

Query:  GVKTLTKKIPQNASITLIVRDTRHDKMEDSILGLVEANLGDGPLYFNVFPNMTMSAFDPKLYGVLVVNVIVEGFEQLPVGVEPINLMVRTVYKLQSDVEP
        GVKTLT KIP NASI L V DTR+D  EDSILGLVE+ L DGP++FN+FPN+TM  F PKL    V+  +V+GFEQLP G  PI+LM RT YKLQ+   P
Subjt:  GVKTLTKKIPQNASITLIVRDTRHDKMEDSILGLVEANLGDGPLYFNVFPNMTMSAFDPKLYGVLVVNVIVEGFEQLPVGVEPINLMVRTVYKLQSDVEP

Query:  SALLESPDGKTVFFQTDVEGSNETVQRVTDWDEVV
        +AL+ESP GKTVFFQT+ E S    Q+V+ WDEV+
Subjt:  SALLESPDGKTVFFQTDVEGSNETVQRVTDWDEVV

TYK18873.1 polyprotein [Cucumis melo var. makuwa]3.9e-5163.31Show/hide
Query:  NGNRAMGLINENPIINDFQD-RFYSMFNVGLVQIGVKTLTKKIPQNASITLIVRDTRHDKMEDSILGLVEANLGDGPLYFNVFPNMTMSAFDPKLYGVLV
        NG++A  LI +NPI+  FQ+ RF +M N+G++QIGVKTLT KIP NASI L V DTR+D  EDSILGLVEA L DGP++FN+FPN+TMS F PKL   LV
Subjt:  NGNRAMGLINENPIINDFQD-RFYSMFNVGLVQIGVKTLTKKIPQNASITLIVRDTRHDKMEDSILGLVEANLGDGPLYFNVFPNMTMSAFDPKLYGVLV

Query:  VNVIVEGFEQLPVGVEPINLMVRTVYKLQSDVEPSALLESPDGKTVFFQTDVEGSNETVQRVTDWDEVV
        +  +V+GFEQLP G  PI+LM RT YKLQ    P+AL+ESP GKTVFFQTD E S   VQ+V++WDEVV
Subjt:  VNVIVEGFEQLPVGVEPINLMVRTVYKLQSDVEPSALLESPDGKTVFFQTDVEGSNETVQRVTDWDEVV

XP_038880673.1 uncharacterized protein LOC120072292 [Benincasa hispida]1.1e-5652.82Show/hide
Query:  MSQLFTKCCSSK--SRNHALDSQEYMKKGNNLLAWKMPKVPTTKLYKRSNKFSFFASDPSIKIREARASFGNGNRAMGLINENPIINDFQD-RFYSMFNV
        M+ LF  CCSS     +HALDS+EY+KKGNNLL WK+PKVPTTK+YKR N F+FF SDPSIK  E + S  NG++A  LI +NPI+  F D RFY+  NV
Subjt:  MSQLFTKCCSSK--SRNHALDSQEYMKKGNNLLAWKMPKVPTTKLYKRSNKFSFFASDPSIKIREARASFGNGNRAMGLINENPIINDFQD-RFYSMFNV

Query:  GLVQIGVKTLTKKIPQNASITLIVRDTRHDKMEDSILGLVEANLGDGPLYFNVFPNMTMSAFDPKLYGVLVVNVIVEGFEQLPVGVEPINLMVRTVYKLQ
        G++QIGVK +T KIP NASI L V D+R++  ED+ILGLVE+NL                                 GFEQLP G  PI+LM RT YKLQ
Subjt:  GLVQIGVKTLTKKIPQNASITLIVRDTRHDKMEDSILGLVEANLGDGPLYFNVFPNMTMSAFDPKLYGVLVVNVIVEGFEQLPVGVEPINLMVRTVYKLQ

Query:  SDVEPSALLESPDGKTVFFQTDVEGSNETVQRVTDWDEVV---RNLVL
            P+ALLESP GKTV+FQTD++ S   VQ+V+ WDEVV   RN+++
Subjt:  SDVEPSALLESPDGKTVFFQTDVEGSNETVQRVTDWDEVV---RNLVL

TrEMBL top hitse value%identityAlignment
A0A0A0LXM3 Uncharacterized protein3.4e-5349.59Show/hide
Query:  LFTKCCSSKS--RNHALDSQEYMKKGNNLLAWKMPKVPTTKLY--KRSNKFSFFAS--DPSIKIREARASFGNGNRAMGLINENPIINDFQDR--FYSMF
        LF K CSSK+   +H+L+ +EY++KG +L+ WKMP+VP  K+Y  +R N F  F S  DPSI+  E + SFGN   +  L  + P     + R  F++  
Subjt:  LFTKCCSSKS--RNHALDSQEYMKKGNNLLAWKMPKVPTTKLY--KRSNKFSFFAS--DPSIKIREARASFGNGNRAMGLINENPIINDFQDR--FYSMF

Query:  NVGLVQIGVKTLTKKIPQNASITLIVRDTRHDKMEDSILGLVEANLGDGPLYFNVFPNMTMSAFDPKLYGVLVVNVIVEGFEQLPVGVEPINLMVRTVYK
        N+GLVQIGVKTLTKKIP NASI L +RD R +K+EDS+L LVE+ LGDGP YFNVFPN+ +S F   +  VL V+V+V+G +++P G  PI +  RT YK
Subjt:  NVGLVQIGVKTLTKKIPQNASITLIVRDTRHDKMEDSILGLVEANLGDGPLYFNVFPNMTMSAFDPKLYGVLVVNVIVEGFEQLPVGVEPINLMVRTVYK

Query:  L-QSDVEPSALLESPDGKTVFFQTDV--EGSNETVQRVTDWDEV
        L Q+D    AL+ESP GKTVFFQ ++  +  ++ VQ+VT W++V
Subjt:  L-QSDVEPSALLESPDGKTVFFQTDV--EGSNETVQRVTDWDEV

A0A0A0LZS0 Uncharacterized protein2.7e-6657.87Show/hide
Query:  TKCCSSK--SRNHALDSQEYMKKGNNLLAWKMPKVPTTKLYKRSNKFSFFASDPSIKIREARASFGNGNRAMGLINENPIINDFQD-RFYSMFNVGLVQI
        T C SS     +H+LDS+EY+KKG NLL WK+PK+PTTK+YK SN F FF SDP IK +E      NG++   LI+ NP++++FQ+ RFY+  N+G++QI
Subjt:  TKCCSSK--SRNHALDSQEYMKKGNNLLAWKMPKVPTTKLYKRSNKFSFFASDPSIKIREARASFGNGNRAMGLINENPIINDFQD-RFYSMFNVGLVQI

Query:  GVKTLTKKIPQNASITLIVRDTRHDKMEDSILGLVEANLGDGPLYFNVFPNMTMSAFDPKLYGVLVVNVIVEGFEQLPVGVEPINLMVRTVYKLQSDVEP
        GVKTLT KIP NASI L V DTR+D  EDSILGLVE+ L DGP++FN+FPN+TM  F PKL    V+  +V+GFEQLP G  PI+LM RT YKLQ+   P
Subjt:  GVKTLTKKIPQNASITLIVRDTRHDKMEDSILGLVEANLGDGPLYFNVFPNMTMSAFDPKLYGVLVVNVIVEGFEQLPVGVEPINLMVRTVYKLQSDVEP

Query:  SALLESPDGKTVFFQTDVEGSNETVQRVTDWDEVV
        +AL+ESP GKTVFFQT+ E S    Q+V+ WDEV+
Subjt:  SALLESPDGKTVFFQTDVEGSNETVQRVTDWDEVV

A0A2G9HI65 Uncharacterized protein6.1e-2634.17Show/hide
Query:  FTKCCSSKSRNHALDSQEYMKKGN---NLLAWKMPKVPTTKLYKRSNKFSFFASDPSIKIREARASFGNGNRAMGLINENPIINDFQDRFYSMFNVGLVQ
        F++  SS S   A  ++E +   N   NL  WK+P+   +++Y+  +K   F SD  IK+ E       G + + ++++  I  +   + Y   ++G++Q
Subjt:  FTKCCSSKSRNHALDSQEYMKKGN---NLLAWKMPKVPTTKLYKRSNKFSFFASDPSIKIREARASFGNGNRAMGLINENPIINDFQDRFYSMFNVGLVQ

Query:  IGVKTLTKKIPQNASITLIVRDTRHDKMEDSILGLVEANLGDGPLYFNVFPNMTMSAFDPKLYGVLVVNVIVEGFEQLPVGVEPINLMVRTVYKLQSDVE
        IG+K LT +I  N S  ++VRD RH++ EDS+LG+VE+ L DG +YF  FPN T+S  DP +   L++N+  EGF+ L  G   + L+ R  YK+ + V 
Subjt:  IGVKTLTKKIPQNASITLIVRDTRHDKMEDSILGLVEANLGDGPLYFNVFPNMTMSAFDPKLYGVLVVNVIVEGFEQLPVGVEPINLMVRTVYKLQSDVE

Query:  PSALLESPD-----GKTVFFQTDVEGSNETVQRVTDWDEV
        P   + S D     G+T  F TD+E  N  V +   W++V
Subjt:  PSALLESPD-----GKTVFFQTDVEGSNETVQRVTDWDEV

A0A5A7U9X3 Polyprotein1.6e-5062.72Show/hide
Query:  NGNRAMGLINENPIINDFQD-RFYSMFNVGLVQIGVKTLTKKIPQNASITLIVRDTRHDKMEDSILGLVEANLGDGPLYFNVFPNMTMSAFDPKLYGVLV
        NG++A  LI +NPI+  FQ+ RF +M N+G++QIGVKTLT KI  NASI L V DTR+D  EDSILGLVEA L DGP++FN+FPN+TMS F PKL   LV
Subjt:  NGNRAMGLINENPIINDFQD-RFYSMFNVGLVQIGVKTLTKKIPQNASITLIVRDTRHDKMEDSILGLVEANLGDGPLYFNVFPNMTMSAFDPKLYGVLV

Query:  VNVIVEGFEQLPVGVEPINLMVRTVYKLQSDVEPSALLESPDGKTVFFQTDVEGSNETVQRVTDWDEVV
        +  +V+GFEQLP G  PI+LM RT YKLQ    P+AL+ESP GKTVFFQTD E S   VQ+V++WDEVV
Subjt:  VNVIVEGFEQLPVGVEPINLMVRTVYKLQSDVEPSALLESPDGKTVFFQTDVEGSNETVQRVTDWDEVV

A0A5D3D5V1 Polyprotein1.9e-5163.31Show/hide
Query:  NGNRAMGLINENPIINDFQD-RFYSMFNVGLVQIGVKTLTKKIPQNASITLIVRDTRHDKMEDSILGLVEANLGDGPLYFNVFPNMTMSAFDPKLYGVLV
        NG++A  LI +NPI+  FQ+ RF +M N+G++QIGVKTLT KIP NASI L V DTR+D  EDSILGLVEA L DGP++FN+FPN+TMS F PKL   LV
Subjt:  NGNRAMGLINENPIINDFQD-RFYSMFNVGLVQIGVKTLTKKIPQNASITLIVRDTRHDKMEDSILGLVEANLGDGPLYFNVFPNMTMSAFDPKLYGVLV

Query:  VNVIVEGFEQLPVGVEPINLMVRTVYKLQSDVEPSALLESPDGKTVFFQTDVEGSNETVQRVTDWDEVV
        +  +V+GFEQLP G  PI+LM RT YKLQ    P+AL+ESP GKTVFFQTD E S   VQ+V++WDEVV
Subjt:  VNVIVEGFEQLPVGVEPINLMVRTVYKLQSDVEPSALLESPDGKTVFFQTDVEGSNETVQRVTDWDEVV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCAGCTTTTCACCAAATGTTGCAGTTCAAAATCCAGAAACCATGCTTTAGACAGCCAAGAATACATGAAGAAAGGGAACAATCTATTGGCTTGGAAGATGCCAAA
AGTTCCCACAACAAAACTGTACAAAAGAAGCAACAAATTCAGCTTCTTCGCCTCCGATCCCTCCATCAAAATAAGAGAAGCAAGAGCTTCATTTGGCAATGGCAACAGAG
CCATGGGACTCATCAACGAAAACCCCATAATTAATGATTTCCAAGACAGATTTTACAGCATGTTCAACGTGGGGCTGGTTCAAATTGGAGTCAAAACCTTAACCAAAAAA
ATCCCACAAAACGCCTCCATAACTCTCATCGTTCGCGACACGAGACACGACAAGATGGAGGATTCCATTCTGGGATTGGTGGAAGCGAATCTAGGAGATGGGCCTCTGTA
TTTCAATGTTTTTCCAAACATGACAATGTCTGCGTTCGATCCTAAGTTATATGGTGTGTTGGTTGTGAATGTGATTGTCGAGGGTTTTGAGCAGCTTCCTGTTGGGGTTG
AGCCCATCAATTTGATGGTTAGAACTGTTTACAAATTGCAAAGTGATGTAGAGCCTAGTGCCTTGTTGGAGAGCCCAGATGGGAAGACTGTGTTCTTTCAGACGGATGTT
GAAGGTTCCAATGAAACCGTTCAAAGGGTTACTGATTGGGATGAAGTTGTTCGCAACCTTGTGCTCTCTGGTGGGGATAAGAAAGCTCAGAGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTCAGCTTTTCACCAAATGTTGCAGTTCAAAATCCAGAAACCATGCTTTAGACAGCCAAGAATACATGAAGAAAGGGAACAATCTATTGGCTTGGAAGATGCCAAA
AGTTCCCACAACAAAACTGTACAAAAGAAGCAACAAATTCAGCTTCTTCGCCTCCGATCCCTCCATCAAAATAAGAGAAGCAAGAGCTTCATTTGGCAATGGCAACAGAG
CCATGGGACTCATCAACGAAAACCCCATAATTAATGATTTCCAAGACAGATTTTACAGCATGTTCAACGTGGGGCTGGTTCAAATTGGAGTCAAAACCTTAACCAAAAAA
ATCCCACAAAACGCCTCCATAACTCTCATCGTTCGCGACACGAGACACGACAAGATGGAGGATTCCATTCTGGGATTGGTGGAAGCGAATCTAGGAGATGGGCCTCTGTA
TTTCAATGTTTTTCCAAACATGACAATGTCTGCGTTCGATCCTAAGTTATATGGTGTGTTGGTTGTGAATGTGATTGTCGAGGGTTTTGAGCAGCTTCCTGTTGGGGTTG
AGCCCATCAATTTGATGGTTAGAACTGTTTACAAATTGCAAAGTGATGTAGAGCCTAGTGCCTTGTTGGAGAGCCCAGATGGGAAGACTGTGTTCTTTCAGACGGATGTT
GAAGGTTCCAATGAAACCGTTCAAAGGGTTACTGATTGGGATGAAGTTGTTCGCAACCTTGTGCTCTCTGGTGGGGATAAGAAAGCTCAGAGCTGA
Protein sequenceShow/hide protein sequence
MSQLFTKCCSSKSRNHALDSQEYMKKGNNLLAWKMPKVPTTKLYKRSNKFSFFASDPSIKIREARASFGNGNRAMGLINENPIINDFQDRFYSMFNVGLVQIGVKTLTKK
IPQNASITLIVRDTRHDKMEDSILGLVEANLGDGPLYFNVFPNMTMSAFDPKLYGVLVVNVIVEGFEQLPVGVEPINLMVRTVYKLQSDVEPSALLESPDGKTVFFQTDV
EGSNETVQRVTDWDEVVRNLVLSGGDKKAQS