; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0034917 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0034917
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description(1->3)-beta-glucan endohydrolase
Genome locationchr3:12348736..12349096
RNA-Seq ExpressionLag0034917
SyntenyLag0034917
Gene Ontology termsGO:0071704 - organic substance metabolic process (biological process)
GO:0016020 - membrane (cellular component)
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139045.1 glucan endo-1,3-beta-glucosidase [Cucumis sativus]6.2e-1563.75Show/hide
Query:  SSLFSTSCSVSFLLLLGALISPSFNQIIGGSKLGNMAMA--IQVEDSMALLPF-GSASGIGRFSRIPQCGGPRRTSTLSI
        SS+F +S S   +LLLG LISP FN+++ G KLGNMAMA  I+ EDSMALLPF GSAS +GRF R+PQCGGPRRT ++ +
Subjt:  SSLFSTSCSVSFLLLLGALISPSFNQIIGGSKLGNMAMA--IQVEDSMALLPF-GSASGIGRFSRIPQCGGPRRTSTLSI

XP_022960882.1 thaumatin-like protein 1b isoform X1 [Cucurbita moschata]7.3e-1668.92Show/hide
Query:  MPSSLFSTSCSVSFLLLLGALISPSFNQIIGGSKLGNMAMAIQVEDSMALLPFGSASGIGRFSRIPQCGGPRRT
        M SS FS   S+S L+LL ALIS  FN +I GS+ GN AMAI+ EDSMALLPFGS SGIGRF R PQCGGP RT
Subjt:  MPSSLFSTSCSVSFLLLLGALISPSFNQIIGGSKLGNMAMAIQVEDSMALLPFGSASGIGRFSRIPQCGGPRRT

XP_022987540.1 thaumatin-like protein 1b isoform X1 [Cucurbita maxima]5.6e-1670.27Show/hide
Query:  MPSSLFSTSCSVSFLLLLGALISPSFNQIIGGSKLGNMAMAIQVEDSMALLPFGSASGIGRFSRIPQCGGPRRT
        M SS FS   S+S L+LL ALIS  FN II GS+ GN AMAI+ EDSMALLPFGS SGIGRF R PQCGGP RT
Subjt:  MPSSLFSTSCSVSFLLLLGALISPSFNQIIGGSKLGNMAMAIQVEDSMALLPFGSASGIGRFSRIPQCGGPRRT

XP_022987541.1 thaumatin-like protein 1b isoform X2 [Cucurbita maxima]6.2e-1570.27Show/hide
Query:  MPSSLFSTSCSVSFLLLLGALISPSFNQIIGGSKLGNMAMAIQVEDSMALLPFGSASGIGRFSRIPQCGGPRRT
        M SS FS   S+S L+LL ALIS  FN II GS+ GN AMAI+ EDSMALLPFGS SGIGRF R PQCGGP RT
Subjt:  MPSSLFSTSCSVSFLLLLGALISPSFNQIIGGSKLGNMAMAIQVEDSMALLPFGSASGIGRFSRIPQCGGPRRT

XP_023515511.1 thaumatin-like protein 2 [Cucurbita pepo subsp. pepo]5.0e-1771.62Show/hide
Query:  MPSSLFSTSCSVSFLLLLGALISPSFNQIIGGSKLGNMAMAIQVEDSMALLPFGSASGIGRFSRIPQCGGPRRT
        M SS F    S+S L+LL ALISP FNQII GS+ GN AMAI+ EDSMALLPFGS SGIGRF R PQCGGP RT
Subjt:  MPSSLFSTSCSVSFLLLLGALISPSFNQIIGGSKLGNMAMAIQVEDSMALLPFGSASGIGRFSRIPQCGGPRRT

TrEMBL top hitse value%identityAlignment
A0A6J1DLI3 (1->3)-beta-glucan endohydrolase4.3e-1466.67Show/hide
Query:  MPSSLFSTSCSVSFLLLLGALISPSFNQIIGGSKLGNMAMAIQVE--DSMALLPFGSASGIGRFSRIPQCGGPRRTSTLSI
        M SS+FS  CSVS LLLLGALIS  F   I G K GNMAMA+ +E  DSMALLPFGSASGI  F R+PQCGGPR T   S+
Subjt:  MPSSLFSTSCSVSFLLLLGALISPSFNQIIGGSKLGNMAMAIQVE--DSMALLPFGSASGIGRFSRIPQCGGPRRTSTLSI

A0A6J1H8M8 thaumatin-like protein 1b isoform X13.5e-1668.92Show/hide
Query:  MPSSLFSTSCSVSFLLLLGALISPSFNQIIGGSKLGNMAMAIQVEDSMALLPFGSASGIGRFSRIPQCGGPRRT
        M SS FS   S+S L+LL ALIS  FN +I GS+ GN AMAI+ EDSMALLPFGS SGIGRF R PQCGGP RT
Subjt:  MPSSLFSTSCSVSFLLLLGALISPSFNQIIGGSKLGNMAMAIQVEDSMALLPFGSASGIGRFSRIPQCGGPRRT

A0A6J1HCE1 thaumatin-like protein 1b isoform X23.9e-1568.92Show/hide
Query:  MPSSLFSTSCSVSFLLLLGALISPSFNQIIGGSKLGNMAMAIQVEDSMALLPFGSASGIGRFSRIPQCGGPRRT
        M SS FS   S+S L+LL ALIS  FN +I GS+ GN AMAI+ EDSMALLPFGS SGIGRF R PQCGGP RT
Subjt:  MPSSLFSTSCSVSFLLLLGALISPSFNQIIGGSKLGNMAMAIQVEDSMALLPFGSASGIGRFSRIPQCGGPRRT

A0A6J1JEJ4 thaumatin-like protein 1b isoform X23.0e-1570.27Show/hide
Query:  MPSSLFSTSCSVSFLLLLGALISPSFNQIIGGSKLGNMAMAIQVEDSMALLPFGSASGIGRFSRIPQCGGPRRT
        M SS FS   S+S L+LL ALIS  FN II GS+ GN AMAI+ EDSMALLPFGS SGIGRF R PQCGGP RT
Subjt:  MPSSLFSTSCSVSFLLLLGALISPSFNQIIGGSKLGNMAMAIQVEDSMALLPFGSASGIGRFSRIPQCGGPRRT

A0A6J1JH58 thaumatin-like protein 1b isoform X12.7e-1670.27Show/hide
Query:  MPSSLFSTSCSVSFLLLLGALISPSFNQIIGGSKLGNMAMAIQVEDSMALLPFGSASGIGRFSRIPQCGGPRRT
        M SS FS   S+S L+LL ALIS  FN II GS+ GN AMAI+ EDSMALLPFGS SGIGRF R PQCGGP RT
Subjt:  MPSSLFSTSCSVSFLLLLGALISPSFNQIIGGSKLGNMAMAIQVEDSMALLPFGSASGIGRFSRIPQCGGPRRT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTTCATCACTCTTCTCCACGTCTTGCTCCGTTTCCTTTCTTCTCCTCCTTGGGGCTTTGATTTCTCCAAGCTTCAACCAAATAATAGGAGGATCGAAGTTGGGAAA
TATGGCGATGGCGATTCAAGTTGAAGATTCCATGGCTCTTTTGCCGTTTGGATCTGCCTCTGGCATTGGCCGCTTCAGTCGAATTCCTCAATGCGGAGGCCCTCGCCGAA
CAAGTACTCTTTCCATCCCTTGTTTGGTTTATACTCTGTTTTCCTCTTCTTGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCTTCATCACTCTTCTCCACGTCTTGCTCCGTTTCCTTTCTTCTCCTCCTTGGGGCTTTGATTTCTCCAAGCTTCAACCAAATAATAGGAGGATCGAAGTTGGGAAA
TATGGCGATGGCGATTCAAGTTGAAGATTCCATGGCTCTTTTGCCGTTTGGATCTGCCTCTGGCATTGGCCGCTTCAGTCGAATTCCTCAATGCGGAGGCCCTCGCCGAA
CAAGTACTCTTTCCATCCCTTGTTTGGTTTATACTCTGTTTTCCTCTTCTTGTTAA
Protein sequenceShow/hide protein sequence
MPSSLFSTSCSVSFLLLLGALISPSFNQIIGGSKLGNMAMAIQVEDSMALLPFGSASGIGRFSRIPQCGGPRRTSTLSIPCLVYTLFSSSC