; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0034919 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0034919
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionSWIM-type domain-containing protein
Genome locationchr3:12362415..12365470
RNA-Seq ExpressionLag0034919
SyntenyLag0034919
Gene Ontology termsNA
InterPro domainsIPR004332 - Transposase, MuDR, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_020080379.1 uncharacterized protein LOC109704055 [Ananas comosus]7.5e-2240.83Show/hide
Query:  MNQVEFRVGMRFTSPKVLKDAIKEYVVRKTYNVKFTKNDKVRVTAVCSRQCKWMLYASVIENDNTIQIKKYFGDHTCSREFANRNMNSNWVAKVYLEQFR
        M   +F +GM F S K  + AI+EY ++  YN+K  KN+K +V AVC   C W++YAS I +  T+Q+K+Y  +H C + F N+ + S+W+AK Y+++FR
Subjt:  MNQVEFRVGMRFTSPKVLKDAIKEYVVRKTYNVKFTKNDKVRVTAVCSRQCKWMLYASVIENDNTIQIKKYFGDHTCSREFANRNMNSNWVAKVYLEQFR

Query:  SQPNWSLAEIVEDVKNDYQV
        + P W L    E V  D  V
Subjt:  SQPNWSLAEIVEDVKNDYQV

XP_020087512.1 uncharacterized protein LOC109709617 [Ananas comosus]1.0e-2340.46Show/hide
Query:  MNQVEFRVGMRFTSPKVLKDAIKEYVVRKTYNVKFTKNDKVRVTAVCSRQCKWMLYASVIENDNTIQIKKYFGDHTCSREFANRNMNSNWVAKVYLEQFR
        M  +EF+VGMRF S   LK+AI++Y +   + +KF KNDK RV AVC   C W +YA+V++++ T+Q+K Y   H CS++F N+ + S W+AK YLE+ +
Subjt:  MNQVEFRVGMRFTSPKVLKDAIKEYVVRKTYNVKFTKNDKVRVTAVCSRQCKWMLYASVIENDNTIQIKKYFGDHTCSREFANRNMNSNWVAKVYLEQFR

Query:  SQPNWSLAEIVEDVKNDYQVLGGLHVIYCLR
          P+W L    + +K++  V   + +  C R
Subjt:  SQPNWSLAEIVEDVKNDYQVLGGLHVIYCLR

XP_028052320.1 uncharacterized protein LOC114256842 [Camellia sinensis]2.4e-2042.48Show/hide
Query:  EFRVGMRFTSPKVLKDAIKEYVVRKTYNVKFTKNDKVRVTAVCSRQCKWMLYASVIENDNTIQIKKYFGDHTCSREFANRNMNSNWVAKVYLEQFRSQPN
        EF++GM F +    KDA++EY V+  Y+VKFTK++  +V   CS  C+W LYAS +  +NT+QIK Y   HTC+R + +R + S ++A  Y+ +FR+ P 
Subjt:  EFRVGMRFTSPKVLKDAIKEYVVRKTYNVKFTKNDKVRVTAVCSRQCKWMLYASVIENDNTIQIKKYFGDHTCSREFANRNMNSNWVAKVYLEQFRSQPN

Query:  WSLAEIVEDVKND
        W + E  + VK+D
Subjt:  WSLAEIVEDVKND

XP_028094043.1 uncharacterized protein LOC114294125 [Camellia sinensis]4.4e-2242.24Show/hide
Query:  EFRVGMRFTSPKVLKDAIKEYVVRKTYNVKFTKNDKVRVTAVCSRQCKWMLYASVIENDNTIQIKKYFGDHTCSREFANRNMNSNWVAKVYLEQFRSQPN
        +F+VGM F S KV K A+KE+ ++   ++KF KNDK RV A C   C+WM+YAS +     +Q+K Y   H C R F N+N+NS W++K Y+E  +S P 
Subjt:  EFRVGMRFTSPKVLKDAIKEYVVRKTYNVKFTKNDKVRVTAVCSRQCKWMLYASVIENDNTIQIKKYFGDHTCSREFANRNMNSNWVAKVYLEQFRSQPN

Query:  WSLAEIVEDVKNDYQV
        W +    + V+ D+ V
Subjt:  WSLAEIVEDVKNDYQV

XP_039118501.1 uncharacterized protein LOC120254469 [Dioscorea cayenensis subsp. rotundata]3.4e-2240Show/hide
Query:  MNQVEFRVGMRFTSPKVLKDAIKEYVVRKTYNVKFTKNDKVRVTAVCSRQCKWMLYASVI----ENDNTIQIKKYFGDHTCSREFANRNMNSNWVAKVYL
        M   +   GM F+  + LK+AIK+Y  R  YN+KF +NDK+RV A+C   C W+L+ S +    ++DNT QIK Y  +HTCS++  NRN+ S W+A  YL
Subjt:  MNQVEFRVGMRFTSPKVLKDAIKEYVVRKTYNVKFTKNDKVRVTAVCSRQCKWMLYASVI----ENDNTIQIKKYFGDHTCSREFANRNMNSNWVAKVYL

Query:  EQFRSQPNWSLAEIVEDVKNDYQVLGGLHVIYCLR
         +F +   +S+  + +DV+ D+ +L  +H+  C R
Subjt:  EQFRSQPNWSLAEIVEDVKNDYQVLGGLHVIYCLR

TrEMBL top hitse value%identityAlignment
A0A6P5EAS5 uncharacterized protein LOC1097040553.6e-2240.83Show/hide
Query:  MNQVEFRVGMRFTSPKVLKDAIKEYVVRKTYNVKFTKNDKVRVTAVCSRQCKWMLYASVIENDNTIQIKKYFGDHTCSREFANRNMNSNWVAKVYLEQFR
        M   +F +GM F S K  + AI+EY ++  YN+K  KN+K +V AVC   C W++YAS I +  T+Q+K+Y  +H C + F N+ + S+W+AK Y+++FR
Subjt:  MNQVEFRVGMRFTSPKVLKDAIKEYVVRKTYNVKFTKNDKVRVTAVCSRQCKWMLYASVIENDNTIQIKKYFGDHTCSREFANRNMNSNWVAKVYLEQFR

Query:  SQPNWSLAEIVEDVKNDYQV
        + P W L    E V  D  V
Subjt:  SQPNWSLAEIVEDVKNDYQV

A0A6P5EVI6 uncharacterized protein LOC1097096175.1e-2440.46Show/hide
Query:  MNQVEFRVGMRFTSPKVLKDAIKEYVVRKTYNVKFTKNDKVRVTAVCSRQCKWMLYASVIENDNTIQIKKYFGDHTCSREFANRNMNSNWVAKVYLEQFR
        M  +EF+VGMRF S   LK+AI++Y +   + +KF KNDK RV AVC   C W +YA+V++++ T+Q+K Y   H CS++F N+ + S W+AK YLE+ +
Subjt:  MNQVEFRVGMRFTSPKVLKDAIKEYVVRKTYNVKFTKNDKVRVTAVCSRQCKWMLYASVIENDNTIQIKKYFGDHTCSREFANRNMNSNWVAKVYLEQFR

Query:  SQPNWSLAEIVEDVKNDYQVLGGLHVIYCLR
          P+W L    + +K++  V   + +  C R
Subjt:  SQPNWSLAEIVEDVKNDYQVLGGLHVIYCLR

A0A6P5SY24 uncharacterized protein LOC1107605572.0e-2035.66Show/hide
Query:  MNQVEFRVGMRFTSPKVLKDAIKEYVVRKTYNVKFTKNDKVRVTAVC-SRQCKWMLYASVIENDNTIQIKKYFGDHTCSREFANRNMNSNWVAKVYLEQF
        M   +F +GM FT+ KV + A++EY + +  NV F +N+ +++ AVC    C WM+YAS ++++NT+Q+K Y G+HTC++ + N  + S W++K Y E  
Subjt:  MNQVEFRVGMRFTSPKVLKDAIKEYVVRKTYNVKFTKNDKVRVTAVC-SRQCKWMLYASVIENDNTIQIKKYFGDHTCSREFANRNMNSNWVAKVYLEQF

Query:  RSQPNWSLAEIVEDVKNDYQVLGGLHVIY
        +S P W +    + V+ DY        +Y
Subjt:  RSQPNWSLAEIVEDVKNDYQVLGGLHVIY

A0A6V7PFI7 Uncharacterized protein1.2e-2038.52Show/hide
Query:  MRFTSPKVLKDAIKEYVVRKTYNVKFTKNDKVRVTAVCSRQCKWMLYASVIENDNTIQIKKYFGDHTCSREFANRNMNSNWVAKVYLEQFRSQPNWSLAE
        M F S   LK+AI++Y ++  + +KF KNDK +V AVC   C W +YA+V++++ T+Q+K Y   H CS++F N+++ S W+AK YLE+ +S P+W L  
Subjt:  MRFTSPKVLKDAIKEYVVRKTYNVKFTKNDKVRVTAVCSRQCKWMLYASVIENDNTIQIKKYFGDHTCSREFANRNMNSNWVAKVYLEQFRSQPNWSLAE

Query:  IVEDVKNDYQVLGGLHVIYCLR
          + +K++  V   + +  C R
Subjt:  IVEDVKNDYQVLGGLHVIYCLR

A0A6V7QX45 SWIM-type domain-containing protein1.1e-2140.5Show/hide
Query:  MNQVEFRVGMRFTSPKVLKDAIKEYVVRKTYNVKFTKNDKVRVTAVCSRQCKWMLYASVIENDNTIQIKKYFGDHTCSREFANRNMNSNWVAKVYLEQFR
        M   +F +GM F S K  + AI+EY ++  YN+K  KN+K +V AVC   C W++YAS I    T+Q+K+Y  +H C + F N+ + S+W+AK Y+++FR
Subjt:  MNQVEFRVGMRFTSPKVLKDAIKEYVVRKTYNVKFTKNDKVRVTAVCSRQCKWMLYASVIENDNTIQIKKYFGDHTCSREFANRNMNSNWVAKVYLEQFR

Query:  SQPNWSLAEIVEDVKNDYQVL
        + P W L    E V  D   L
Subjt:  SQPNWSLAEIVEDVKNDYQVL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G64260.1 MuDR family transposase1.6e-0932.71Show/hide
Query:  EFRVGMRFTSPKVLKDAIKEYVVRKTYNVKFTKNDKVRVTAVCSR-QCKWMLYASVIENDNTIQIKKYFGDHTCSREFANRNMNSNWVAKVYLEQFRSQP
        +  +G+ F     LK A+  + +R+  N    + +K   T  C R +CKW L A+ +E    ++I KY G HTCS E+ N +  S + A       R QP
Subjt:  EFRVGMRFTSPKVLKDAIKEYVVRKTYNVKFTKNDKVRVTAVCSR-QCKWMLYASVIENDNTIQIKKYFGDHTCSREFANRNMNSNWVAKVYLEQFRSQP

Query:  NWSLAEI
          S+AE+
Subjt:  NWSLAEI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCAGGTTGAGTTTAGGGTGGGTATGAGGTTTACAAGCCCCAAGGTCTTAAAAGATGCTATAAAAGAATATGTTGTAAGAAAGACTTACAATGTCAAGTTCACAAA
GAATGATAAGGTGAGGGTGACTGCGGTTTGTTCTAGACAGTGTAAATGGATGTTGTATGCTAGTGTTATTGAAAATGATAACACTATCCAAATTAAGAAATATTTTGGTG
ATCATACATGTAGTAGAGAATTTGCAAACAGGAACATGAACTCCAATTGGGTTGCCAAGGTGTATTTGGAACAGTTTAGGAGTCAACCTAATTGGTCTCTTGCTGAAATT
GTTGAGGATGTGAAAAATGACTATCAGGTTCTTGGCGGGTTGCATGTCATTTATTGTCTTAGATGTTTACCATCTAAAAGAGGGATTCCTCCTCCCTCTTCTGTATCAGA
TCTGAAACGGAAGGGGGAGGAGGAACTCCTCGATTCCGGCGCTGAATCGGGGAGGAGGAGCTCCTCCCCTCCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAACCAGGTTGAGTTTAGGGTGGGTATGAGGTTTACAAGCCCCAAGGTCTTAAAAGATGCTATAAAAGAATATGTTGTAAGAAAGACTTACAATGTCAAGTTCACAAA
GAATGATAAGGTGAGGGTGACTGCGGTTTGTTCTAGACAGTGTAAATGGATGTTGTATGCTAGTGTTATTGAAAATGATAACACTATCCAAATTAAGAAATATTTTGGTG
ATCATACATGTAGTAGAGAATTTGCAAACAGGAACATGAACTCCAATTGGGTTGCCAAGGTGTATTTGGAACAGTTTAGGAGTCAACCTAATTGGTCTCTTGCTGAAATT
GTTGAGGATGTGAAAAATGACTATCAGGTTCTTGGCGGGTTGCATGTCATTTATTGTCTTAGATGTTTACCATCTAAAAGAGGGATTCCTCCTCCCTCTTCTGTATCAGA
TCTGAAACGGAAGGGGGAGGAGGAACTCCTCGATTCCGGCGCTGAATCGGGGAGGAGGAGCTCCTCCCCTCCCTGA
Protein sequenceShow/hide protein sequence
MNQVEFRVGMRFTSPKVLKDAIKEYVVRKTYNVKFTKNDKVRVTAVCSRQCKWMLYASVIENDNTIQIKKYFGDHTCSREFANRNMNSNWVAKVYLEQFRSQPNWSLAEI
VEDVKNDYQVLGGLHVIYCLRCLPSKRGIPPPSSVSDLKRKGEEELLDSGAESGRRSSSPP