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Lag0034940 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0034940
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionMuDRA-like transposase
Genome locationchr3:12678710..12679236
RNA-Seq ExpressionLag0034940
SyntenyLag0034940
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061196.1 MuDRA-like transposase [Cucumis melo var. makuwa]5.0e-1033.08Show/hide
Query:  MSTNLAECTNSVLKDARELPITAFMNHIRGWLQAKYYKR---GNKHSSNPSQWSKV---------------------YHVDSL-----------INAYAQ
        M+TN+AE  NS+LK+ R+L I +F+ H+R  LQ  +++R   G K +S  ++W+K+                     +  + L            NAYA+
Subjt:  MSTNLAECTNSVLKDARELPITAFMNHIRGWLQAKYYKR---GNKHSSNPSQWSKV---------------------YHVDSL-----------INAYAQ

Query:  PIQPLGHESKWKRSPQFVDVEVLPPRRVSRVGR
         + P+G++S WK S  +V + VLPP+ V RVGR
Subjt:  PIQPLGHESKWKRSPQFVDVEVLPPRRVSRVGR

XP_022144014.1 uncharacterized protein LOC111013803 [Momordica charantia]7.7e-1136.8Show/hide
Query:  MSTNLAECTNSVLKDARELPITAFMNHIRG-----------------WLQAKYYK--------RGNKHSSNP-SQWSKVYHVDSLINAYAQPIQPLGHES
        M+TN+AE  N++ +   +LP+TA ++HIRG                   +  Y+K        R    + NP S   + Y  +S I AYA+PI P+GH S
Subjt:  MSTNLAECTNSVLKDARELPITAFMNHIRG-----------------WLQAKYYK--------RGNKHSSNP-SQWSKVYHVDSLINAYAQPIQPLGHES

Query:  KWKRSPQFVDVEVLPPRRVSRVGRR
         W  SP+FV++ V PP+ V RVGRR
Subjt:  KWKRSPQFVDVEVLPPRRVSRVGRR

XP_022151004.1 uncharacterized protein LOC111019024 [Momordica charantia]2.4e-1237.04Show/hide
Query:  MSTNLAECTNSVLKDARELPITAFMNHIRGWLQAKYYKRGNKHSS-----------------------------------NP-SQWSKVYHVDSLINAYA
        M+TN+AE  N++ + AR+LP+TA ++HIRG LQ  +Y R    +S                                   NP S   + Y  +S I AYA
Subjt:  MSTNLAECTNSVLKDARELPITAFMNHIRGWLQAKYYKRGNKHSS-----------------------------------NP-SQWSKVYHVDSLINAYA

Query:  QPIQPLGHESKWKRSPQFVDVEVLPPRRVSRVGRR
        +PI P+GH S W  SP+FV++ V PP+ V RVGRR
Subjt:  QPIQPLGHESKWKRSPQFVDVEVLPPRRVSRVGRR

XP_022156122.1 uncharacterized protein LOC111023087 [Momordica charantia]1.1e-0932Show/hide
Query:  MSTNLAECTNSVLKDARELPITAFMNHIRGWLQAKYYKRGNKH--------------------------------------------------SSNP-SQ
        M+TN+AE  N++ + AR+LP+TA ++HIR  + AK      +H                                                  S NP + 
Subjt:  MSTNLAECTNSVLKDARELPITAFMNHIRGWLQAKYYKRGNKH--------------------------------------------------SSNP-SQ

Query:  WSKVYHVDSLINAYAQPIQPLGHESKWKRSPQFVDVEVLPPRRVSRVGRR
          +VY V+S + AYA+PI P+G  S WK SP FV+++V PP++V RVGRR
Subjt:  WSKVYHVDSLINAYAQPIQPLGHESKWKRSPQFVDVEVLPPRRVSRVGRR

XP_022156977.1 uncharacterized protein LOC111023804 [Momordica charantia]1.1e-0931.33Show/hide
Query:  MSTNLAECTNSVLKDARELPITAFMNHIRGWLQAKYYKRGNKH--------------------------------------------------SSNP-SQ
        M+TN+AE  N++ + AR+LP+TA ++HIR  + A+Y     +H                                                  + NP S 
Subjt:  MSTNLAECTNSVLKDARELPITAFMNHIRGWLQAKYYKRGNKH--------------------------------------------------SSNP-SQ

Query:  WSKVYHVDSLINAYAQPIQPLGHESKWKRSPQFVDVEVLPPRRVSRVGRR
          + Y  +S I AYA+PI P+GH S W  SP+FV++ V PP+ V RVGRR
Subjt:  WSKVYHVDSLINAYAQPIQPLGHESKWKRSPQFVDVEVLPPRRVSRVGRR

TrEMBL top hitse value%identityAlignment
A0A5A7V3V7 MuDRA-like transposase2.4e-1033.08Show/hide
Query:  MSTNLAECTNSVLKDARELPITAFMNHIRGWLQAKYYKR---GNKHSSNPSQWSKV---------------------YHVDSL-----------INAYAQ
        M+TN+AE  NS+LK+ R+L I +F+ H+R  LQ  +++R   G K +S  ++W+K+                     +  + L            NAYA+
Subjt:  MSTNLAECTNSVLKDARELPITAFMNHIRGWLQAKYYKR---GNKHSSNPSQWSKV---------------------YHVDSL-----------INAYAQ

Query:  PIQPLGHESKWKRSPQFVDVEVLPPRRVSRVGR
         + P+G++S WK S  +V + VLPP+ V RVGR
Subjt:  PIQPLGHESKWKRSPQFVDVEVLPPRRVSRVGR

A0A6J1CR19 uncharacterized protein LOC1110138033.7e-1136.8Show/hide
Query:  MSTNLAECTNSVLKDARELPITAFMNHIRG-----------------WLQAKYYK--------RGNKHSSNP-SQWSKVYHVDSLINAYAQPIQPLGHES
        M+TN+AE  N++ +   +LP+TA ++HIRG                   +  Y+K        R    + NP S   + Y  +S I AYA+PI P+GH S
Subjt:  MSTNLAECTNSVLKDARELPITAFMNHIRG-----------------WLQAKYYK--------RGNKHSSNP-SQWSKVYHVDSLINAYAQPIQPLGHES

Query:  KWKRSPQFVDVEVLPPRRVSRVGRR
         W  SP+FV++ V PP+ V RVGRR
Subjt:  KWKRSPQFVDVEVLPPRRVSRVGRR

A0A6J1DBQ5 uncharacterized protein LOC1110190241.2e-1237.04Show/hide
Query:  MSTNLAECTNSVLKDARELPITAFMNHIRGWLQAKYYKRGNKHSS-----------------------------------NP-SQWSKVYHVDSLINAYA
        M+TN+AE  N++ + AR+LP+TA ++HIRG LQ  +Y R    +S                                   NP S   + Y  +S I AYA
Subjt:  MSTNLAECTNSVLKDARELPITAFMNHIRGWLQAKYYKRGNKHSS-----------------------------------NP-SQWSKVYHVDSLINAYA

Query:  QPIQPLGHESKWKRSPQFVDVEVLPPRRVSRVGRR
        +PI P+GH S W  SP+FV++ V PP+ V RVGRR
Subjt:  QPIQPLGHESKWKRSPQFVDVEVLPPRRVSRVGRR

A0A6J1DR67 uncharacterized protein LOC1110230875.4e-1032Show/hide
Query:  MSTNLAECTNSVLKDARELPITAFMNHIRGWLQAKYYKRGNKH--------------------------------------------------SSNP-SQ
        M+TN+AE  N++ + AR+LP+TA ++HIR  + AK      +H                                                  S NP + 
Subjt:  MSTNLAECTNSVLKDARELPITAFMNHIRGWLQAKYYKRGNKH--------------------------------------------------SSNP-SQ

Query:  WSKVYHVDSLINAYAQPIQPLGHESKWKRSPQFVDVEVLPPRRVSRVGRR
          +VY V+S + AYA+PI P+G  S WK SP FV+++V PP++V RVGRR
Subjt:  WSKVYHVDSLINAYAQPIQPLGHESKWKRSPQFVDVEVLPPRRVSRVGRR

A0A6J1DTD4 uncharacterized protein LOC1110238045.4e-1031.33Show/hide
Query:  MSTNLAECTNSVLKDARELPITAFMNHIRGWLQAKYYKRGNKH--------------------------------------------------SSNP-SQ
        M+TN+AE  N++ + AR+LP+TA ++HIR  + A+Y     +H                                                  + NP S 
Subjt:  MSTNLAECTNSVLKDARELPITAFMNHIRGWLQAKYYKRGNKH--------------------------------------------------SSNP-SQ

Query:  WSKVYHVDSLINAYAQPIQPLGHESKWKRSPQFVDVEVLPPRRVSRVGRR
          + Y  +S I AYA+PI P+GH S W  SP+FV++ V PP+ V RVGRR
Subjt:  WSKVYHVDSLINAYAQPIQPLGHESKWKRSPQFVDVEVLPPRRVSRVGRR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCACCAATCTTGCGGAGTGCACTAACTCAGTGTTGAAAGATGCACGAGAGCTCCCAATCACCGCATTCATGAATCATATCAGAGGGTGGCTACAAGCAAAATACTA
CAAACGCGGGAATAAGCACTCTAGTAACCCGAGCCAGTGGTCGAAAGTCTACCATGTGGATTCTTTGATAAATGCATATGCACAGCCCATACAACCCCTTGGGCATGAGT
CGAAGTGGAAGAGGTCACCTCAATTCGTCGATGTGGAAGTCTTGCCTCCTCGAAGAGTGTCTAGAGTTGGTCGTCGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCCACCAATCTTGCGGAGTGCACTAACTCAGTGTTGAAAGATGCACGAGAGCTCCCAATCACCGCATTCATGAATCATATCAGAGGGTGGCTACAAGCAAAATACTA
CAAACGCGGGAATAAGCACTCTAGTAACCCGAGCCAGTGGTCGAAAGTCTACCATGTGGATTCTTTGATAAATGCATATGCACAGCCCATACAACCCCTTGGGCATGAGT
CGAAGTGGAAGAGGTCACCTCAATTCGTCGATGTGGAAGTCTTGCCTCCTCGAAGAGTGTCTAGAGTTGGTCGTCGTTAA
Protein sequenceShow/hide protein sequence
MSTNLAECTNSVLKDARELPITAFMNHIRGWLQAKYYKRGNKHSSNPSQWSKVYHVDSLINAYAQPIQPLGHESKWKRSPQFVDVEVLPPRRVSRVGRR