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Lag0034948 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0034948
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTransmembrane protein
Genome locationchr3:12828942..12829352
RNA-Seq ExpressionLag0034948
SyntenyLag0034948
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607234.1 hypothetical protein SDJN03_00576, partial [Cucurbita argyrosperma subsp. sororia]4.5e-1270.42Show/hide
Query:  TEEDEDEEDLESEDHAKSRGDISGKGSRNRILSDIITTIQTPFFTPM------ASPLSSLDSYKLHGFNIL
        T ++E  EDLESED AKSRGD S KGSRNR LSDIIT I+TPFFTP+      ASPL SLDSYKLH FN L
Subjt:  TEEDEDEEDLESEDHAKSRGDISGKGSRNRILSDIITTIQTPFFTPM------ASPLSSLDSYKLHGFNIL

XP_015874117.1 uncharacterized protein LOC107411112 [Ziziphus jujuba]4.6e-0960.56Show/hide
Query:  TEEDEDEEDLESEDHAKSRGDISGKGSRNRILSDIITTIQTPFFTPMA------SPLSSLDSYKLHGFNIL
        T ++E +EDLESED  KSRGD S KGSR R LSD+I  + TPF TP+A      SPL+ LDSYK HGFN L
Subjt:  TEEDEDEEDLESEDHAKSRGDISGKGSRNRILSDIITTIQTPFFTPMA------SPLSSLDSYKLHGFNIL

XP_022948541.1 uncharacterized protein LOC111452187 [Cucurbita moschata]4.5e-1270.42Show/hide
Query:  TEEDEDEEDLESEDHAKSRGDISGKGSRNRILSDIITTIQTPFFTPM------ASPLSSLDSYKLHGFNIL
        T ++E  EDLESED AKSRGD S KGSRNR LSDIIT I+TPFFTP+      ASPL SLDSYKLH FN L
Subjt:  TEEDEDEEDLESEDHAKSRGDISGKGSRNRILSDIITTIQTPFFTPM------ASPLSSLDSYKLHGFNIL

XP_022997949.1 uncharacterized protein LOC111492746 [Cucurbita maxima]4.5e-1270.42Show/hide
Query:  TEEDEDEEDLESEDHAKSRGDISGKGSRNRILSDIITTIQTPFFTPM------ASPLSSLDSYKLHGFNIL
        T ++E  EDLESED AKSRGD S KGSRNR LSDIIT I+TPFFTP+      ASPL SLDSYKLH FN L
Subjt:  TEEDEDEEDLESEDHAKSRGDISGKGSRNRILSDIITTIQTPFFTPM------ASPLSSLDSYKLHGFNIL

XP_023523159.1 uncharacterized protein LOC111787432 [Cucurbita pepo subsp. pepo]4.5e-1270.42Show/hide
Query:  TEEDEDEEDLESEDHAKSRGDISGKGSRNRILSDIITTIQTPFFTPM------ASPLSSLDSYKLHGFNIL
        T ++E  EDLESED AKSRGD S KGSRNR LSDIIT I+TPFFTP+      ASPL SLDSYKLH FN L
Subjt:  TEEDEDEEDLESEDHAKSRGDISGKGSRNRILSDIITTIQTPFFTPM------ASPLSSLDSYKLHGFNIL

TrEMBL top hitse value%identityAlignment
A0A314YIV2 Uncharacterized protein3.8e-0954.76Show/hide
Query:  TEEDEDEEDLESEDHAKSRGDISGKGSRNRILSDIITTIQTPFFTPM------ASPLSSLDSYKLHGFNILLLPPSSNFPEMQR
        T  +E +EDLESED  KSRGD S KGSR R LSD+I ++ TP+ +P+      +SPLSSLDSYK HGFN L    SS   E+ R
Subjt:  TEEDEDEEDLESEDHAKSRGDISGKGSRNRILSDIITTIQTPFFTPM------ASPLSSLDSYKLHGFNILLLPPSSNFPEMQR

A0A6J1G9H1 uncharacterized protein LOC1114521872.2e-1270.42Show/hide
Query:  TEEDEDEEDLESEDHAKSRGDISGKGSRNRILSDIITTIQTPFFTPM------ASPLSSLDSYKLHGFNIL
        T ++E  EDLESED AKSRGD S KGSRNR LSDIIT I+TPFFTP+      ASPL SLDSYKLH FN L
Subjt:  TEEDEDEEDLESEDHAKSRGDISGKGSRNRILSDIITTIQTPFFTPM------ASPLSSLDSYKLHGFNIL

A0A6J1KBC0 uncharacterized protein LOC1114927462.2e-1270.42Show/hide
Query:  TEEDEDEEDLESEDHAKSRGDISGKGSRNRILSDIITTIQTPFFTPM------ASPLSSLDSYKLHGFNIL
        T ++E  EDLESED AKSRGD S KGSRNR LSDIIT I+TPFFTP+      ASPL SLDSYKLH FN L
Subjt:  TEEDEDEEDLESEDHAKSRGDISGKGSRNRILSDIITTIQTPFFTPM------ASPLSSLDSYKLHGFNIL

A0A6P6FW46 uncharacterized protein LOC1074110782.2e-0960.56Show/hide
Query:  TEEDEDEEDLESEDHAKSRGDISGKGSRNRILSDIITTIQTPFFTPMA------SPLSSLDSYKLHGFNIL
        T ++E +EDLESED  KSRGD S KGSR R LSD+I  + TPF TP+A      SPL+ LDSYK HGFN L
Subjt:  TEEDEDEEDLESEDHAKSRGDISGKGSRNRILSDIITTIQTPFFTPMA------SPLSSLDSYKLHGFNIL

M5WLR5 Uncharacterized protein3.8e-0954.76Show/hide
Query:  TEEDEDEEDLESEDHAKSRGDISGKGSRNRILSDIITTIQTPFFTPM------ASPLSSLDSYKLHGFNILLLPPSSNFPEMQR
        T  +E +EDLESED  KSRGD S KGSR R LSD+I ++ TP+ +P+      +SPLSSLDSYK HGFN L    SS   E+ R
Subjt:  TEEDEDEEDLESEDHAKSRGDISGKGSRNRILSDIITTIQTPFFTPM------ASPLSSLDSYKLHGFNILLLPPSSNFPEMQR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G59350.1 unknown protein6.0e-0752.31Show/hide
Query:  DEDEEDLESEDHAKSRGDISGKGSRNRILSDIITTIQTPFFTPMASPLSS---LDSYKLHGFNIL
        +E + DLESED  KSR    G  SR R LSD+     TP FTP+ASP  S   L+SY  HGFN L
Subjt:  DEDEEDLESEDHAKSRGDISGKGSRNRILSDIITTIQTPFFTPMASPLSS---LDSYKLHGFNIL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTGGACCTCGAGCTCGGCTGCAAGTGAAGATTTGTTGTTGAAGATGACCGAGGAAGACGAAGATGAGGAAGATTTGGAATCTGAAGATCATGCGAAATCTAGAGG
CGATATAAGCGGAAAAGGGTCGAGAAACAGAATCTTGAGTGATATAATCACAACGATTCAAACGCCGTTCTTCACTCCCATGGCTTCTCCTCTAAGCTCTTTAGACTCGT
ACAAGCTTCATGGATTCAATATTCTCCTCCTCCCCCCAAGTTCAAATTTCCCAGAGATGCAGAGGAGAAATTGTACAAAGACTAATGGAAGAAGCTCAAAGAAGGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATTGGACCTCGAGCTCGGCTGCAAGTGAAGATTTGTTGTTGAAGATGACCGAGGAAGACGAAGATGAGGAAGATTTGGAATCTGAAGATCATGCGAAATCTAGAGG
CGATATAAGCGGAAAAGGGTCGAGAAACAGAATCTTGAGTGATATAATCACAACGATTCAAACGCCGTTCTTCACTCCCATGGCTTCTCCTCTAAGCTCTTTAGACTCGT
ACAAGCTTCATGGATTCAATATTCTCCTCCTCCCCCCAAGTTCAAATTTCCCAGAGATGCAGAGGAGAAATTGTACAAAGACTAATGGAAGAAGCTCAAAGAAGGGTTGA
Protein sequenceShow/hide protein sequence
MDWTSSSAASEDLLLKMTEEDEDEEDLESEDHAKSRGDISGKGSRNRILSDIITTIQTPFFTPMASPLSSLDSYKLHGFNILLLPPSSNFPEMQRRNCTKTNGRSSKKG