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Lag0034957 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0034957
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRegulator of chromosome condensation (RCC1) family with FYVE zinc finger domain
Genome locationchr3:12903819..12906739
RNA-Seq ExpressionLag0034957
SyntenyLag0034957
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR011993 - PH-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN66844.2 hypothetical protein Csa_007427 [Cucumis sativus]2.5e-1974.65Show/hide
Query:  MDRMVQDLSRTGAVERDVEQAITALKKGAYLLKYGRRGKPKFCPFRLSNVSMVLFLQMKKEYKSVSLKSIT
        MDRMVQDLS+TGAVERDVEQAITALKKGAYLLKYGRRGKPKFCPFRLSN   +L     KE K + L  ++
Subjt:  MDRMVQDLSRTGAVERDVEQAITALKKGAYLLKYGRRGKPKFCPFRLSNVSMVLFLQMKKEYKSVSLKSIT

XP_004139058.3 PH, RCC1 and FYVE domains-containing protein 1 [Cucumis sativus]2.5e-1974.65Show/hide
Query:  MDRMVQDLSRTGAVERDVEQAITALKKGAYLLKYGRRGKPKFCPFRLSNVSMVLFLQMKKEYKSVSLKSIT
        MDRMVQDLS+TGAVERDVEQAITALKKGAYLLKYGRRGKPKFCPFRLSN   +L     KE K + L  ++
Subjt:  MDRMVQDLSRTGAVERDVEQAITALKKGAYLLKYGRRGKPKFCPFRLSNVSMVLFLQMKKEYKSVSLKSIT

XP_008450356.1 PREDICTED: uncharacterized protein LOC103491987 [Cucumis melo]2.5e-1974.65Show/hide
Query:  MDRMVQDLSRTGAVERDVEQAITALKKGAYLLKYGRRGKPKFCPFRLSNVSMVLFLQMKKEYKSVSLKSIT
        MDRMVQDLS+TGAVERDVEQAITALKKGAYLLKYGRRGKPKFCPFRLSN   +L     KE K + L  ++
Subjt:  MDRMVQDLSRTGAVERDVEQAITALKKGAYLLKYGRRGKPKFCPFRLSNVSMVLFLQMKKEYKSVSLKSIT

XP_022148922.1 uncharacterized protein LOC111017472 [Momordica charantia]1.2e-1874.65Show/hide
Query:  MDRMVQDLSRTGAVERDVEQAITALKKGAYLLKYGRRGKPKFCPFRLSNVSMVLFLQMKKEYKSVSLKSIT
        MDRMV+D SRTGAVERDVEQAITALKKGAYLLKYGRRGKPKFCPFRLSN   VL     KE K + L  ++
Subjt:  MDRMVQDLSRTGAVERDVEQAITALKKGAYLLKYGRRGKPKFCPFRLSNVSMVLFLQMKKEYKSVSLKSIT

XP_038880009.1 PH, RCC1 and FYVE domains-containing protein 1 [Benincasa hispida]1.1e-1976.06Show/hide
Query:  MDRMVQDLSRTGAVERDVEQAITALKKGAYLLKYGRRGKPKFCPFRLSNVSMVLFLQMKKEYKSVSLKSIT
        MDRMVQDLSRTGAVERDVEQAITALKKGAYLLKYGRRGKPKFCPFRLSN   +L     KE K + L  ++
Subjt:  MDRMVQDLSRTGAVERDVEQAITALKKGAYLLKYGRRGKPKFCPFRLSNVSMVLFLQMKKEYKSVSLKSIT

TrEMBL top hitse value%identityAlignment
A0A1Q3B2B4 RCC1 domain-containing protein/FYVE domain-containing protein/BRX domain-containing protein/Mcp5_PH domain-containing protein/BRX_N domain-containing protein1.7e-1873.24Show/hide
Query:  MDRMVQDLSRTGAVERDVEQAITALKKGAYLLKYGRRGKPKFCPFRLSNVSMVLFLQMKKEYKSVSLKSIT
        MDRM  DLSRTG VERDVEQAITALKKGAYLLKYGRRGKPKFCPFRLSN   VL     KE K + L  ++
Subjt:  MDRMVQDLSRTGAVERDVEQAITALKKGAYLLKYGRRGKPKFCPFRLSNVSMVLFLQMKKEYKSVSLKSIT

A0A1S3BPQ5 uncharacterized protein LOC1034919871.2e-1974.65Show/hide
Query:  MDRMVQDLSRTGAVERDVEQAITALKKGAYLLKYGRRGKPKFCPFRLSNVSMVLFLQMKKEYKSVSLKSIT
        MDRMVQDLS+TGAVERDVEQAITALKKGAYLLKYGRRGKPKFCPFRLSN   +L     KE K + L  ++
Subjt:  MDRMVQDLSRTGAVERDVEQAITALKKGAYLLKYGRRGKPKFCPFRLSNVSMVLFLQMKKEYKSVSLKSIT

A0A6J1D6C9 uncharacterized protein LOC1110174726.0e-1974.65Show/hide
Query:  MDRMVQDLSRTGAVERDVEQAITALKKGAYLLKYGRRGKPKFCPFRLSNVSMVLFLQMKKEYKSVSLKSIT
        MDRMV+D SRTGAVERDVEQAITALKKGAYLLKYGRRGKPKFCPFRLSN   VL     KE K + L  ++
Subjt:  MDRMVQDLSRTGAVERDVEQAITALKKGAYLLKYGRRGKPKFCPFRLSNVSMVLFLQMKKEYKSVSLKSIT

A0A6J1IE52 PH, RCC1 and FYVE domains-containing protein 1-like1.3e-1873.24Show/hide
Query:  MDRMVQDLSRTGAVERDVEQAITALKKGAYLLKYGRRGKPKFCPFRLSNVSMVLFLQMKKEYKSVSLKSIT
        MDRM QDLSRTGA ERDVEQAITALKKGAYLLKYGRRGKPKFCPFR+SN   VL     KE K + L  ++
Subjt:  MDRMVQDLSRTGAVERDVEQAITALKKGAYLLKYGRRGKPKFCPFRLSNVSMVLFLQMKKEYKSVSLKSIT

A0A6J1JKF3 PH, RCC1 and FYVE domains-containing protein 1-like2.3e-1871.83Show/hide
Query:  MDRMVQDLSRTGAVERDVEQAITALKKGAYLLKYGRRGKPKFCPFRLSNVSMVLFLQMKKEYKSVSLKSIT
        M+R  QDLSRTGAVERDVEQAITALKKGAYLLKYGRRGKPKFCPFRLSN   +L     KE K + L  ++
Subjt:  MDRMVQDLSRTGAVERDVEQAITALKKGAYLLKYGRRGKPKFCPFRLSNVSMVLFLQMKKEYKSVSLKSIT

SwissProt top hitse value%identityAlignment
Q947D2 PH, RCC1 and FYVE domains-containing protein 15.1e-0744.62Show/hide
Query:  DLSRTGAVERDVEQAITALKKGAYLLKYGRRGKPKFCPFRLSNVSMVLFLQMKKEYKSVSLKSIT
        DL      + ++EQA+  LKKG  LLKYGR+GKPKF PFRLS+    L        K + L S++
Subjt:  DLSRTGAVERDVEQAITALKKGAYLLKYGRRGKPKFCPFRLSNVSMVLFLQMKKEYKSVSLKSIT

Arabidopsis top hitse value%identityAlignment
AT1G69710.1 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain6.8e-1559.38Show/hide
Query:  DLSRTGAVERDVEQAITALKKGAYLLKYGRRGKPKFCPFRLSNVSMVLFLQMKKEYKSVSLKSI
        D  RT   ERDVEQAIT+LKKG+YLLKYGRRGKPKFCPF+L++    L     KE K + L  +
Subjt:  DLSRTGAVERDVEQAITALKKGAYLLKYGRRGKPKFCPFRLSNVSMVLFLQMKKEYKSVSLKSI

AT3G47660.1 Regulator of chromosome condensation (RCC1) family protein4.1e-1256.45Show/hide
Query:  RTGAVERDVEQAITALKKGAYLLKYGRRGKPKFCPFRLSNVSMVLFLQMKKEYKSVSLKSIT
        R+   +R+ EQAI  LKKGAYLLKYGRRGKPKF PFRLS+  + L     K+ K + L S+T
Subjt:  RTGAVERDVEQAITALKKGAYLLKYGRRGKPKFCPFRLSNVSMVLFLQMKKEYKSVSLKSIT

AT5G12350.1 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain5.9e-1966.67Show/hide
Query:  RMVQDLSRTGAVERDVEQAITALKKGAYLLKYGRRGKPKFCPFRLSNVSMVLFLQMKKEYKSVSLKSIT
        RM  DLSR G VERD+EQAI ALKKGAYLLKYGRRGKPKFCPFRLSN   VL      E K + L  ++
Subjt:  RMVQDLSRTGAVERDVEQAITALKKGAYLLKYGRRGKPKFCPFRLSNVSMVLFLQMKKEYKSVSLKSIT

AT5G19420.1 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain1.7e-1869.23Show/hide
Query:  DLSRTGAVERDVEQAITALKKGAYLLKYGRRGKPKFCPFRLSNVSMVLFLQMKKEYKSVSLKSIT
        DLSR G V RD+EQAITALKKGAYLLKYGRRGKPKFCPFRLSN   VL     KE K + L  ++
Subjt:  DLSRTGAVERDVEQAITALKKGAYLLKYGRRGKPKFCPFRLSNVSMVLFLQMKKEYKSVSLKSIT

AT5G19420.2 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain4.4e-1448.91Show/hide
Query:  DLSRTGAVERDVEQ---------------------------AITALKKGAYLLKYGRRGKPKFCPFRLSNVSMVLFLQMKKEYKSVSLKSIT
        DLSR G V RD+EQ                           AITALKKGAYLLKYGRRGKPKFCPFRLSN   VL     KE K + L  ++
Subjt:  DLSRTGAVERDVEQ---------------------------AITALKKGAYLLKYGRRGKPKFCPFRLSNVSMVLFLQMKKEYKSVSLKSIT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAGGATGGTTCAGGATCTTAGTAGGACTGGCGCCGTCGAGAGGGATGTCGAGCAGGCCATTACTGCTTTGAAGAAAGGAGCCTACTTGCTCAAGTATGGAAGAAG
AGGGAAGCCAAAGTTTTGTCCTTTCCGCCTTTCCAATGTGAGTATGGTTTTGTTTCTCCAGATGAAAAAGGAATACAAGAGCGTATCTTTAAAGAGCATAACTCTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATAGGATGGTTCAGGATCTTAGTAGGACTGGCGCCGTCGAGAGGGATGTCGAGCAGGCCATTACTGCTTTGAAGAAAGGAGCCTACTTGCTCAAGTATGGAAGAAG
AGGGAAGCCAAAGTTTTGTCCTTTCCGCCTTTCCAATGTGAGTATGGTTTTGTTTCTCCAGATGAAAAAGGAATACAAGAGCGTATCTTTAAAGAGCATAACTCTGTAA
Protein sequenceShow/hide protein sequence
MDRMVQDLSRTGAVERDVEQAITALKKGAYLLKYGRRGKPKFCPFRLSNVSMVLFLQMKKEYKSVSLKSITL