; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0034962 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0034962
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein isoform 1
Genome locationchr3:12949650..12951096
RNA-Seq ExpressionLag0034962
SyntenyLag0034962
Gene Ontology termsNA
InterPro domainsIPR025322 - Protein of unknown function DUF4228, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588215.1 hypothetical protein SDJN03_16780, partial [Cucurbita argyrosperma subsp. sororia]3.0e-8179.9Show/hide
Query:  MGNSLSPCLHPISTTHRRRSSAVKLIFSDGLTRTLAGNHHIAGEIMFQFPDMMVCHADSFFIGHPVPSLAIDDQLLPGETYFVLPIDPFASFDVLSTSSL
        MGNSLSPCLH ISTT  RRSSAV LIFS+G+T++L GNHHIAGEIMFQFPDMM+CHADSFFIGHP+PSLAIDDQLL GETYFVLPID FASFDVLSTSSL
Subjt:  MGNSLSPCLHPISTTHRRRSSAVKLIFSDGLTRTLAGNHHIAGEIMFQFPDMMVCHADSFFIGHPVPSLAIDDQLLPGETYFVLPIDPFASFDVLSTSSL

Query:  AAIGAGSGAAAKFSGESPFEYIQGTNGRVLIKVVPEFIVKLISPVEAADGGDGGGGGGFLCSTPELKKHYDQLVGSSKGQVWSPKLETISEYKI
        A+IGAG+   AKFSG+SPFEYI+GTNGR++IK+VPEF+V+LISP         G GG FLCSTPEL+KHYDQLVGS+KGQVWSPKLE+ISEYKI
Subjt:  AAIGAGSGAAAKFSGESPFEYIQGTNGRVLIKVVPEFIVKLISPVEAADGGDGGGGGGFLCSTPELKKHYDQLVGSSKGQVWSPKLETISEYKI

KAG7022114.1 hypothetical protein SDJN02_15843, partial [Cucurbita argyrosperma subsp. argyrosperma]1.9e-8380.41Show/hide
Query:  MGNSLSPCLHPISTTHRRRSSAVKLIFSDGLTRTLAGNHHIAGEIMFQFPDMMVCHADSFFIGHPVPSLAIDDQLLPGETYFVLPIDPFASFDVLSTSSL
        MGNSLSPCLH ISTTHR RSSAV LIFS+G+T++L GNHHIAGEIMFQFPDMM+CHADSFFIGHP+PSLAIDDQLL GETYFVLPID FASFDVLSTSSL
Subjt:  MGNSLSPCLHPISTTHRRRSSAVKLIFSDGLTRTLAGNHHIAGEIMFQFPDMMVCHADSFFIGHPVPSLAIDDQLLPGETYFVLPIDPFASFDVLSTSSL

Query:  AAIGAGSGAAAKFSGESPFEYIQGTNGRVLIKVVPEFIVKLISPVEAADGGDGGGGGGFLCSTPELKKHYDQLVGSSKGQVWSPKLETISEYKI
        A+IGA +   AKFSG+SPFEYI+GTNGR++IK+VPEF+V+LISP         GGGG FLCSTPEL+KHYDQLVGS+KGQVWSPKLE+ISEYKI
Subjt:  AAIGAGSGAAAKFSGESPFEYIQGTNGRVLIKVVPEFIVKLISPVEAADGGDGGGGGGFLCSTPELKKHYDQLVGSSKGQVWSPKLETISEYKI

XP_022927424.1 uncharacterized protein LOC111434251 [Cucurbita moschata]3.2e-8380.41Show/hide
Query:  MGNSLSPCLHPISTTHRRRSSAVKLIFSDGLTRTLAGNHHIAGEIMFQFPDMMVCHADSFFIGHPVPSLAIDDQLLPGETYFVLPIDPFASFDVLSTSSL
        MGNSLSPCLH ISTT RR SSAV LIFS+G+T++L GNHHIAGEIMFQFPDMM+CHADSFFIGHP+PSLAIDDQLL GETYFVLPID FASFDVLSTSSL
Subjt:  MGNSLSPCLHPISTTHRRRSSAVKLIFSDGLTRTLAGNHHIAGEIMFQFPDMMVCHADSFFIGHPVPSLAIDDQLLPGETYFVLPIDPFASFDVLSTSSL

Query:  AAIGAGSGAAAKFSGESPFEYIQGTNGRVLIKVVPEFIVKLISPVEAADGGDGGGGGGFLCSTPELKKHYDQLVGSSKGQVWSPKLETISEYKI
        A+IGAG+   AKFSG+SPFEYI+GTNGR++IK+VPEF+V+LISP         GGGG FLCSTPEL+KHYDQLVGS+KGQVWSPKLE+ISEYKI
Subjt:  AAIGAGSGAAAKFSGESPFEYIQGTNGRVLIKVVPEFIVKLISPVEAADGGDGGGGGGFLCSTPELKKHYDQLVGSSKGQVWSPKLETISEYKI

XP_023530355.1 uncharacterized protein LOC111792953 [Cucurbita pepo subsp. pepo]1.6e-8279.38Show/hide
Query:  MGNSLSPCLHPISTTHRRRSSAVKLIFSDGLTRTLAGNHHIAGEIMFQFPDMMVCHADSFFIGHPVPSLAIDDQLLPGETYFVLPIDPFASFDVLSTSSL
        MGNSLSPCLH ISTT RRRSSAV LIFS+G+T++L GNHHIAGEIMFQFPDMM+CHADSFFIGHP+PSLAIDDQL+ GETYFV+PID FASFDVLSTSSL
Subjt:  MGNSLSPCLHPISTTHRRRSSAVKLIFSDGLTRTLAGNHHIAGEIMFQFPDMMVCHADSFFIGHPVPSLAIDDQLLPGETYFVLPIDPFASFDVLSTSSL

Query:  AAIGAGSGAAAKFSGESPFEYIQGTNGRVLIKVVPEFIVKLISPVEAADGGDGGGGGGFLCSTPELKKHYDQLVGSSKGQVWSPKLETISEYKI
        A+IGAG+   AKFSG+SPFEYI+GTNGR++IK+VPEF+V+LISP          GGG FLCSTPEL+KHYDQLVGS+KGQVWSPKLE+ISEYKI
Subjt:  AAIGAGSGAAAKFSGESPFEYIQGTNGRVLIKVVPEFIVKLISPVEAADGGDGGGGGGFLCSTPELKKHYDQLVGSSKGQVWSPKLETISEYKI

XP_038880154.1 uncharacterized protein LOC120071833 [Benincasa hispida]3.3e-8077.84Show/hide
Query:  MGNSLSPCLHPISTTHRRRSSAVKLIFSDGLTRTLAGNHHIAGEIMFQFPDMMVCHADSFFIGHPVPSLAIDDQLLPGETYFVLPIDPFASFDVLSTSSL
        MGN+ SPC   IS +HRRR+SAVKLIFS+G T+ L GNHH+AGEIMFQFPDMMVCHA+SFFIGHP+PSLAI+D+LL GETY VLPID FAS DVLSTSSL
Subjt:  MGNSLSPCLHPISTTHRRRSSAVKLIFSDGLTRTLAGNHHIAGEIMFQFPDMMVCHADSFFIGHPVPSLAIDDQLLPGETYFVLPIDPFASFDVLSTSSL

Query:  AAIGAGSGAAAKFSGESPFEYIQGTNGRVLIKVVPEFIVKLISPVEAADGGDGGGGGGFLCSTPELKKHYDQLVGSSKGQVWSPKLETISEYKI
        A I AG+ +A KFSG  PFEY++GTNGRVLIKV+PEFIV+LIS      GG  GGGGGFLCSTPELKKHYDQLVG+SKGQVWSPKLETISEYKI
Subjt:  AAIGAGSGAAAKFSGESPFEYIQGTNGRVLIKVVPEFIVKLISPVEAADGGDGGGGGGFLCSTPELKKHYDQLVGSSKGQVWSPKLETISEYKI

TrEMBL top hitse value%identityAlignment
A0A0A0LZV5 Uncharacterized protein1.8e-7675Show/hide
Query:  MGNSLSPCLHPISTTH-RRRSSAVKLIFSDGLTRTLAGNHHIAGEIMFQFPDMMVCHADSFFIGHPVPSLAIDDQLLPGETYFVLPIDPFASFDVLSTSS
        MGN++SPCL  IS +   RR S VKL+F++G T+ LAG+HH AGEIMFQFPDMMVCHA+SFFIGHP+PSL+IDDQL+ GETY +LPID FAS DVLSTSS
Subjt:  MGNSLSPCLHPISTTH-RRRSSAVKLIFSDGLTRTLAGNHHIAGEIMFQFPDMMVCHADSFFIGHPVPSLAIDDQLLPGETYFVLPIDPFASFDVLSTSS

Query:  LAAIGAGSGAAAKFSGESPFEYIQGTNGRVLIKVVPEFIVKLISPVEAADGGDG-GGGGGFLCSTPELKKHYDQLVGSSKGQVWSPKLETISEYKI
        LA IGAG+ +  KFSG  PFEY++GTNG+VLIKV+PEFIV+LIS   A DGG+  GGGGGFLCSTPELKKHYDQLVGS+KGQVWSPKLETISEYKI
Subjt:  LAAIGAGSGAAAKFSGESPFEYIQGTNGRVLIKVVPEFIVKLISPVEAADGGDG-GGGGGFLCSTPELKKHYDQLVGSSKGQVWSPKLETISEYKI

A0A1S3BP11 uncharacterized protein LOC1034919833.6e-8077.95Show/hide
Query:  MGNSLSPCLHPISTTHRR-RSSAVKLIFSDGLTRTLAGNHHIAGEIMFQFPDMMVCHADSFFIGHPVPSLAIDDQLLPGETYFVLPIDPFASFDVLSTSS
        MGN++SPCL  IS + RR R SAVKL+F+DG T+ L GNHH AGEIMFQFPDMMVCHA+SFFIGHP+PSL+IDD+LL GETY VLPID FAS DVLSTSS
Subjt:  MGNSLSPCLHPISTTHRR-RSSAVKLIFSDGLTRTLAGNHHIAGEIMFQFPDMMVCHADSFFIGHPVPSLAIDDQLLPGETYFVLPIDPFASFDVLSTSS

Query:  LAAIGAGSGAAAKFSGESPFEYIQGTNGRVLIKVVPEFIVKLISPVEAADGGDGGGGGGFLCSTPELKKHYDQLVGSSKGQVWSPKLETISEYKI
        LA IGAG+ +A KFSG  PFEY++GTNGRVLIKV+PEFIV+LISP     G  GGGGGGFLCSTPELKKHYDQLVGS+KGQVWSPKLETISEYKI
Subjt:  LAAIGAGSGAAAKFSGESPFEYIQGTNGRVLIKVVPEFIVKLISPVEAADGGDGGGGGGFLCSTPELKKHYDQLVGSSKGQVWSPKLETISEYKI

A0A5A7UN34 DUF4228 domain protein4.7e-8077.95Show/hide
Query:  MGNSLSPCLHPISTTHRR-RSSAVKLIFSDGLTRTLAGNHHIAGEIMFQFPDMMVCHADSFFIGHPVPSLAIDDQLLPGETYFVLPIDPFASFDVLSTSS
        MGN++SPCL  IS + RR R SAVKL+F+DG T+ L GNHH AGEIMFQFPDMMVCHA+SFFIGHP+PSL+IDD+LL GETY VLPID FAS DVLSTSS
Subjt:  MGNSLSPCLHPISTTHRR-RSSAVKLIFSDGLTRTLAGNHHIAGEIMFQFPDMMVCHADSFFIGHPVPSLAIDDQLLPGETYFVLPIDPFASFDVLSTSS

Query:  LAAIGAGSGAAAKFSGESPFEYIQGTNGRVLIKVVPEFIVKLISPVEAADGGDGGGGGGFLCSTPELKKHYDQLVGSSKGQVWSPKLETISEYKI
        LA IGAG+ +A KFSG  PFEY++GTNGRVLIKV+PEFIV+LISP     G  GGGGGGFLCSTPELKKHYDQLVGS+KGQVWSPKLETISEYKI
Subjt:  LAAIGAGSGAAAKFSGESPFEYIQGTNGRVLIKVVPEFIVKLISPVEAADGGDGGGGGGFLCSTPELKKHYDQLVGSSKGQVWSPKLETISEYKI

A0A6J1EHY7 uncharacterized protein LOC1114342511.6e-8380.41Show/hide
Query:  MGNSLSPCLHPISTTHRRRSSAVKLIFSDGLTRTLAGNHHIAGEIMFQFPDMMVCHADSFFIGHPVPSLAIDDQLLPGETYFVLPIDPFASFDVLSTSSL
        MGNSLSPCLH ISTT RR SSAV LIFS+G+T++L GNHHIAGEIMFQFPDMM+CHADSFFIGHP+PSLAIDDQLL GETYFVLPID FASFDVLSTSSL
Subjt:  MGNSLSPCLHPISTTHRRRSSAVKLIFSDGLTRTLAGNHHIAGEIMFQFPDMMVCHADSFFIGHPVPSLAIDDQLLPGETYFVLPIDPFASFDVLSTSSL

Query:  AAIGAGSGAAAKFSGESPFEYIQGTNGRVLIKVVPEFIVKLISPVEAADGGDGGGGGGFLCSTPELKKHYDQLVGSSKGQVWSPKLETISEYKI
        A+IGAG+   AKFSG+SPFEYI+GTNGR++IK+VPEF+V+LISP         GGGG FLCSTPEL+KHYDQLVGS+KGQVWSPKLE+ISEYKI
Subjt:  AAIGAGSGAAAKFSGESPFEYIQGTNGRVLIKVVPEFIVKLISPVEAADGGDGGGGGGFLCSTPELKKHYDQLVGSSKGQVWSPKLETISEYKI

A0A6J1HB88 uncharacterized protein LOC1114617443.1e-7675.77Show/hide
Query:  MGNSLSPCLHPISTTHRRRSSAVKLIFSDGLTRTLAGNHHIAGEIMFQFPDMMVCHADSFFIGHPVPSLAIDDQLLPGETYFVLPIDPFASFDVLSTSSL
        MGN++SPCL P S T+R RSSAVKLIFS G TR LAG+HH AGEIMFQFPDM+VCHADSFFIGH +PSLAI+D+LL GETY VLPID F+  DVLSTSSL
Subjt:  MGNSLSPCLHPISTTHRRRSSAVKLIFSDGLTRTLAGNHHIAGEIMFQFPDMMVCHADSFFIGHPVPSLAIDDQLLPGETYFVLPIDPFASFDVLSTSSL

Query:  AAIGAGSGAAAKFSGESPFEYIQGTNGRVLIKVVPEFIVKLISPVEAADGGDGGGGGGFLCSTPELKKHYDQLVGSSKGQVWSPKLETISEYKI
        AAIGAG+ AA KFS   PFEY++G NG+ LIKV+PEFIV+L+SP     G  GG GGGFLCSTPELKKHYDQLVG+SKGQVWSP LETISEYKI
Subjt:  AAIGAGSGAAAKFSGESPFEYIQGTNGRVLIKVVPEFIVKLISPVEAADGGDGGGGGGFLCSTPELKKHYDQLVGSSKGQVWSPKLETISEYKI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G28190.1 unknown protein8.0e-1631.63Show/hide
Query:  CLHPISTTHRRRSSAVKLIFSDGLTRTLAGNHHIAGEIMFQFPDMMVCHADSFFIGHPVPSLAIDDQLLPGETYFVLPIDPFASFDVLSTSSLAAIGAGS
        CLHP           +KL+ SDG +  +     +  E+   FP   +C +D  +IG   P L+  + L  G  YF+LP D F +     T +        
Subjt:  CLHPISTTHRRRSSAVKLIFSDGLTRTLAGNHHIAGEIMFQFPDMMVCHADSFFIGHPVPSLAIDDQLLPGETYFVLPIDPFASFDVLSTSSLAAIGAGS

Query:  GAAAKFSGESPFEYI--QGTNG-RVLIKVVPEFIVKLISP-------VEAADGGDGGGGGGFLCSTPELKKHYDQLVGSSKGQVWSPKLETISEYK
        G   K + + P  ++  +G  G R+ I+V  EF+ +L+          E  +   GG G G +C+T +LKK Y QLVG  +   W PKLETI+E K
Subjt:  GAAAKFSGESPFEYI--QGTNG-RVLIKVVPEFIVKLISP-------VEAADGGDGGGGGGFLCSTPELKKHYDQLVGSSKGQVWSPKLETISEYK

AT3G50800.1 unknown protein2.4e-0430.61Show/hide
Query:  RRSSAVKLIFSDGLTRTLAGNHHIAGEIMFQFPDMMVCHADSFFIGHPVPSLAIDDQLLPGETYFVLPI---------DPFASFDVLSTSSLAAIGAG
        RR+   KLI  DG  +  +    +  +I+ + P   VC++D       V ++   + L PGE YFVLP+         D  A+  V ++S+LA  G G
Subjt:  RRSSAVKLIFSDGLTRTLAGNHHIAGEIMFQFPDMMVCHADSFFIGHPVPSLAIDDQLLPGETYFVLPI---------DPFASFDVLSTSSLAAIGAG

AT5G12340.1 unknown protein6.5e-4247.34Show/hide
Query:  MGNSLSPCLHPISTTHRRRSSAVKLIFSDGL-TRTLAG-NHHIAGEIMFQFPDMMVCHADSFFIGHPVPSLAIDDQLLPGETYFVLPIDPFASFDVLSTS
        MG SL     PI    RRR   V L+F + + T+TL G   H+AGEIMF+FPD +VCHADSF+IG  +P+LA+DD L+PG+TYFVLPI+ F  + +L+TS
Subjt:  MGNSLSPCLHPISTTHRRRSSAVKLIFSDGL-TRTLAG-NHHIAGEIMFQFPDMMVCHADSFFIGHPVPSLAIDDQLLPGETYFVLPIDPFASFDVLSTS

Query:  SLAAIGA------GSGAAAKFSGES---PFEYIQGTNGRVLIKVVPEFIVKLISPVE--AADGGDGGGGGGFLCSTPELKKHYDQLVGSSKGQVWSPKLE
         L+   +       +     F+  S   PFEY QG NG++LIKV PEFI+ LI        +     G    +C++PELKK YDQLVG ++  +WSP L+
Subjt:  SLAAIGA------GSGAAAKFSGES---PFEYIQGTNGRVLIKVVPEFIVKLISPVE--AADGGDGGGGGGFLCSTPELKKHYDQLVGSSKGQVWSPKLE

Query:  TISEYKI
        TISE+KI
Subjt:  TISEYKI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAATTCACTCTCTCCATGTCTTCATCCCATTTCCACCACCCACCGCCGCCGCTCCTCCGCCGTCAAGCTCATCTTCTCCGACGGCCTCACCAGAACCCTCGCTGG
AAACCACCACATCGCCGGCGAGATCATGTTCCAATTCCCCGACATGATGGTCTGCCATGCCGATTCCTTCTTCATCGGCCACCCAGTCCCCTCCTTAGCCATCGACGACC
AGCTCCTCCCCGGCGAGACCTATTTCGTTCTCCCGATCGACCCGTTTGCCTCCTTCGACGTTCTCTCGACATCGTCGCTTGCCGCAATCGGCGCCGGTAGTGGGGCAGCG
GCGAAATTCTCCGGCGAGAGCCCGTTTGAGTACATTCAGGGCACGAATGGGAGAGTTCTGATTAAGGTCGTGCCGGAGTTTATCGTTAAGCTCATTTCTCCGGTGGAGGC
GGCGGACGGCGGAGATGGCGGCGGAGGAGGTGGGTTTTTGTGTAGTACGCCGGAGTTGAAGAAGCACTACGATCAACTAGTTGGATCGTCGAAGGGGCAAGTTTGGTCGC
CGAAATTGGAGACTATTTCGGAGTATAAAATTAGCGCTCCGAACGACCCAGTACGGGGGTTAAGAGTGGTGCCATATGTATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAAATTCACTCTCTCCATGTCTTCATCCCATTTCCACCACCCACCGCCGCCGCTCCTCCGCCGTCAAGCTCATCTTCTCCGACGGCCTCACCAGAACCCTCGCTGG
AAACCACCACATCGCCGGCGAGATCATGTTCCAATTCCCCGACATGATGGTCTGCCATGCCGATTCCTTCTTCATCGGCCACCCAGTCCCCTCCTTAGCCATCGACGACC
AGCTCCTCCCCGGCGAGACCTATTTCGTTCTCCCGATCGACCCGTTTGCCTCCTTCGACGTTCTCTCGACATCGTCGCTTGCCGCAATCGGCGCCGGTAGTGGGGCAGCG
GCGAAATTCTCCGGCGAGAGCCCGTTTGAGTACATTCAGGGCACGAATGGGAGAGTTCTGATTAAGGTCGTGCCGGAGTTTATCGTTAAGCTCATTTCTCCGGTGGAGGC
GGCGGACGGCGGAGATGGCGGCGGAGGAGGTGGGTTTTTGTGTAGTACGCCGGAGTTGAAGAAGCACTACGATCAACTAGTTGGATCGTCGAAGGGGCAAGTTTGGTCGC
CGAAATTGGAGACTATTTCGGAGTATAAAATTAGCGCTCCGAACGACCCAGTACGGGGGTTAAGAGTGGTGCCATATGTATAG
Protein sequenceShow/hide protein sequence
MGNSLSPCLHPISTTHRRRSSAVKLIFSDGLTRTLAGNHHIAGEIMFQFPDMMVCHADSFFIGHPVPSLAIDDQLLPGETYFVLPIDPFASFDVLSTSSLAAIGAGSGAA
AKFSGESPFEYIQGTNGRVLIKVVPEFIVKLISPVEAADGGDGGGGGGFLCSTPELKKHYDQLVGSSKGQVWSPKLETISEYKISAPNDPVRGLRVVPYV