CuGenDBv2

Gene ID	Lag0034970
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Genome location	chr3:13082939..13086222
RNA-Seq Expression	Lag0034970
Synteny	Lag0034970
Gene Ontology terms	GO:0005488 - binding (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

RVW17147.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]

2.5e-53

38.51

Show/hide

Query:  EPKSFDGVMKFDGKNFGYWKMQVKDYLTCKKVH-KALKERSKDMKDEDWEALDEEAVATIRMCLSMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYL
        E     G+ KFDG +F YW+MQ++DYL  +K+H   L  + + MK E+W  LD + +  IR+ LS  VA  V  E T   LM+ L+  YEKPSANNKV+L
Subjt:  EPKSFDGVMKFDGKNFGYWKMQVKDYLTCKKVH-KALKERSKDMKDEDWEALDEEAVATIRMCLSMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYL

Query:  VKKFFNMQMSEDASVNSYINEVTTLINQLKSVKIEFSDEVNAIQLLTSLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSAL-V
        +KK FN++M+E+ASV  ++NE  T+ NQL SV+I+F DE+ A+ +L SLP+SWE M+ AVSNSTG   LK++++ DL +AEEIRR+ + + S  GSAL +
Subjt:  VKKFFNMQMSEDASVNSYINEVTTLINQLKSVKIEFSDEVNAIQLLTSLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSAL-V

Query:  MTKGKDKVDEDNEPSS-----SKKKWKVGMRRASWPVRMGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKLTDDGFMCEFGSRQCKL
         T+G+      N+ +S      ++  +  +      V + +G      G+GDV +    G   +L  VR++P+++ NLIS+G+L D+G    F     K+
Subjt:  MTKGKDKVDEDNEPSS-----SKKKWKVGMRRASWPVRMGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKLTDDGFMCEFGSRQCKL

Query:  KFGSQWMPVKAADGSCRGTVEPAARIAKFDQFDQDPSVQKQLGSPGEK
          G++ +      G+   T  P   IA  D         ++LG   EK
Subjt:  KFGSQWMPVKAADGSCRGTVEPAARIAKFDQFDQDPSVQKQLGSPGEK

RVW41523.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]

8.6e-54

39.47

Show/hide

Query:  GVMKFDGKNFGYWKMQVKDYLTCKKVH-KALKERSKDMKDEDWEALDEEAVATIRMCLSMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYLVKKFFN
        G+ KFDG +F YW+MQ++DYL  +K+H   L  + + MK E+W  LD + +  IR+ LS  VA  V  E T   LM++L+  YEKPSANNKV+L+KK FN
Subjt:  GVMKFDGKNFGYWKMQVKDYLTCKKVH-KALKERSKDMKDEDWEALDEEAVATIRMCLSMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYLVKKFFN

Query:  MQMSEDASVNSYINEVTTLINQLKSVKIEFSDEVNAIQLLTSLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSAL-VMTKGKD
        ++M+E+ASV  ++NE  T+ NQL SV+I+F DE+ A+ +L SLP+SWE M+ AVSNSTG   LK++++ DL +AEEIRR+ + + S  GSAL + T+G++
Subjt:  MQMSEDASVNSYINEVTTLINQLKSVKIEFSDEVNAIQLLTSLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSAL-VMTKGKD

Query:  KVDEDNEPSSSKKKWKVGMRRASWPVRMGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKLTDDGFMCEFGSRQCKLKFGSQWMPVKA
        +V +            V      WP+           G+GDV +    G   +L  VR++P+++ NLIS+G+L D+G    F     K+  G++ +    
Subjt:  KVDEDNEPSSSKKKWKVGMRRASWPVRMGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKLTDDGFMCEFGSRQCKLKFGSQWMPVKA

Query:  ADGSCRGTVEPAARIAKFDQFDQDPSVQKQLGSPGEK
          G+   T  P   IA  D         ++LG   EK
Subjt:  ADGSCRGTVEPAARIAKFDQFDQDPSVQKQLGSPGEK

RVW44991.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]

2.8e-52

39.81

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Query:  EPKSFDGVMKFDGKNFGYWKMQVKDYLTCKKVH-KALKERSKDMKDEDWEALDEEAVATIRMCLSMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYL
        E  +  G+ KFDG +F YW+MQ++DYL  +K+H   L  + + MK E+W  LD   +  IR+ LS  VA  V  E T   LM++L+  YEKPSANNKV+L
Subjt:  EPKSFDGVMKFDGKNFGYWKMQVKDYLTCKKVH-KALKERSKDMKDEDWEALDEEAVATIRMCLSMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYL

Query:  VKKFFNMQMSEDASVNSYINEVTTLINQLKSVKIEFSDEVNAIQLLTSLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSAL-V
        +KK FN++M E+ASV  ++NE  T+ NQL SV+I+F DE+ A+ +L SLP+SWE M+  VSNSTG   LK++++ DL +AEEIRR+ +++ S  GSAL +
Subjt:  VKKFFNMQMSEDASVNSYINEVTTLINQLKSVKIEFSDEVNAIQLLTSLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSAL-V

Query:  MTKG-----------KDKVDEDNEPSSSKKKWKVGMRRASWPVRMGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKLTDDGFMCEFG
         T+G           K K ++D   + +++ +  G       V + +G      G+GDV +    G   +L  VR++P+++ NLIS+G+L D+G    F 
Subjt:  MTKG-----------KDKVDEDNEPSSSKKKWKVGMRRASWPVRMGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKLTDDGFMCEFG

Query:  SRQCKLKFGSQWMPVKAADGSCRG
                G  W   K A    RG
Subjt:  SRQCKLKFGSQWMPVKAADGSCRG

RVW60263.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]

1.6e-52

37.92

Show/hide

Query:  GVMKFDGKNFGYWKMQVKDYLTCKKVH-KALKERSKDMKDEDWEALDEEAVATIRMCLSMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYLVKKFFN
        G+ KFDG +F YW+MQ++DYL  +K+H   L  + + MK E+W  LD + +  IR+ LS  VA  V  E T   LM++L+  YEKPSANNKV+L+KK FN
Subjt:  GVMKFDGKNFGYWKMQVKDYLTCKKVH-KALKERSKDMKDEDWEALDEEAVATIRMCLSMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYLVKKFFN

Query:  MQMSEDASVNSYINEVTTLINQLKSVKIEFSDEVNAIQLLTSLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSAL-VMTKGKD
        ++M+E+ASV  ++NE  T+ NQL SV+I+F DE+ A+ +L SLP+SWE M+ AVSNSTG   LK++++ DL +AEEIRR+ + + S  GSAL + T+G++
Subjt:  MQMSEDASVNSYINEVTTLINQLKSVKIEFSDEVNAIQLLTSLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSAL-VMTKGKD

Query:  KVDE----------DNEPSSSKKKWKVGMRRA---------SWPVRMGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKLTDDGFMCE
        +V +          D+    S   +     R             V + +G      G+GDV +    G   +L  VR++P+++ NLIS+G+L D+G    
Subjt:  KVDE----------DNEPSSSKKKWKVGMRRA---------SWPVRMGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKLTDDGFMCE

Query:  FGSRQCKLKFGSQWMPVKAADGSCRGTVEPAARIAKFDQFDQDPSVQKQLGSPGEK
        F     K+  G++ +      G+   T  P   IA  D         ++LG   EK
Subjt:  FGSRQCKLKFGSQWMPVKAADGSCRGTVEPAARIAKFDQFDQDPSVQKQLGSPGEK

RVX13003.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]

1.1e-51

39.88

Show/hide

Query:  GVMKFDGKNFGYWKMQVKDYLTCKKVH-KALKERSKDMKDEDWEALDEEAVATIRMCLSMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYLVKKFFN
        G+ KFDG +F YW+MQ++DYL  +K+H   L  + K MK E+W  LD + +  IR+ LS  VA  V  E T   LM++L+  YEKPSANNKV+L+KK FN
Subjt:  GVMKFDGKNFGYWKMQVKDYLTCKKVH-KALKERSKDMKDEDWEALDEEAVATIRMCLSMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYLVKKFFN

Query:  MQMSEDASVNSYINEVTTLINQLKSVKIEFSDEVNAIQLLTSLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSAL-VMTKGK-
        ++M+E+ASV  ++N+  T+ NQL  V+I+F DE+ A+ +L SLP+SWE M+  VSNSTG   LK++++ DL +AEEIRR+ + + S  GSAL + T+G+ 
Subjt:  MQMSEDASVNSYINEVTTLINQLKSVKIEFSDEVNAIQLLTSLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSAL-VMTKGK-

Query:  ---------DKVDEDNEPSSSKKKWKVGMRRA----SWPVRMGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKLTDDGFMCEFGSRQ
                  K +ED+  ++  ++    +  A       V + +G      G+GDV +    G   +L  VR++P++K NLIS+G+L D+G    F    
Subjt:  ---------DKVDEDNEPSSSKKKWKVGMRRA----SWPVRMGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKLTDDGFMCEFGSRQ

Query:  CKLKFGSQWMPVKAADGSCRG
             G  W   K A    RG
Subjt:  CKLKFGSQWMPVKAADGSCRG

TrEMBL top hits

e value

%identity

Alignment

A0A438C1P0 Retrovirus-related Pol polyprotein from transposon TNT 1-94

1.2e-53

38.51

Show/hide

Query:  EPKSFDGVMKFDGKNFGYWKMQVKDYLTCKKVH-KALKERSKDMKDEDWEALDEEAVATIRMCLSMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYL
        E     G+ KFDG +F YW+MQ++DYL  +K+H   L  + + MK E+W  LD + +  IR+ LS  VA  V  E T   LM+ L+  YEKPSANNKV+L
Subjt:  EPKSFDGVMKFDGKNFGYWKMQVKDYLTCKKVH-KALKERSKDMKDEDWEALDEEAVATIRMCLSMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYL

Query:  VKKFFNMQMSEDASVNSYINEVTTLINQLKSVKIEFSDEVNAIQLLTSLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSAL-V
        +KK FN++M+E+ASV  ++NE  T+ NQL SV+I+F DE+ A+ +L SLP+SWE M+ AVSNSTG   LK++++ DL +AEEIRR+ + + S  GSAL +
Subjt:  VKKFFNMQMSEDASVNSYINEVTTLINQLKSVKIEFSDEVNAIQLLTSLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSAL-V

Query:  MTKGKDKVDEDNEPSS-----SKKKWKVGMRRASWPVRMGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKLTDDGFMCEFGSRQCKL
         T+G+      N+ +S      ++  +  +      V + +G      G+GDV +    G   +L  VR++P+++ NLIS+G+L D+G    F     K+
Subjt:  MTKGKDKVDEDNEPSS-----SKKKWKVGMRRASWPVRMGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKLTDDGFMCEFGSRQCKL

Query:  KFGSQWMPVKAADGSCRGTVEPAARIAKFDQFDQDPSVQKQLGSPGEK
          G++ +      G+   T  P   IA  D         ++LG   EK
Subjt:  KFGSQWMPVKAADGSCRGTVEPAARIAKFDQFDQDPSVQKQLGSPGEK

A0A438E1E8 Retrovirus-related Pol polyprotein from transposon TNT 1-94

4.2e-54

39.47

Show/hide

Query:  GVMKFDGKNFGYWKMQVKDYLTCKKVH-KALKERSKDMKDEDWEALDEEAVATIRMCLSMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYLVKKFFN
        G+ KFDG +F YW+MQ++DYL  +K+H   L  + + MK E+W  LD + +  IR+ LS  VA  V  E T   LM++L+  YEKPSANNKV+L+KK FN
Subjt:  GVMKFDGKNFGYWKMQVKDYLTCKKVH-KALKERSKDMKDEDWEALDEEAVATIRMCLSMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYLVKKFFN

Query:  MQMSEDASVNSYINEVTTLINQLKSVKIEFSDEVNAIQLLTSLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSAL-VMTKGKD
        ++M+E+ASV  ++NE  T+ NQL SV+I+F DE+ A+ +L SLP+SWE M+ AVSNSTG   LK++++ DL +AEEIRR+ + + S  GSAL + T+G++
Subjt:  MQMSEDASVNSYINEVTTLINQLKSVKIEFSDEVNAIQLLTSLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSAL-VMTKGKD

Query:  KVDEDNEPSSSKKKWKVGMRRASWPVRMGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKLTDDGFMCEFGSRQCKLKFGSQWMPVKA
        +V +            V      WP+           G+GDV +    G   +L  VR++P+++ NLIS+G+L D+G    F     K+  G++ +    
Subjt:  KVDEDNEPSSSKKKWKVGMRRASWPVRMGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKLTDDGFMCEFGSRQCKLKFGSQWMPVKA

Query:  ADGSCRGTVEPAARIAKFDQFDQDPSVQKQLGSPGEK
          G+   T  P   IA  D         ++LG   EK
Subjt:  ADGSCRGTVEPAARIAKFDQFDQDPSVQKQLGSPGEK

A0A438EB12 Retrovirus-related Pol polyprotein from transposon TNT 1-94

1.3e-52

39.81

Show/hide

Query:  EPKSFDGVMKFDGKNFGYWKMQVKDYLTCKKVH-KALKERSKDMKDEDWEALDEEAVATIRMCLSMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYL
        E  +  G+ KFDG +F YW+MQ++DYL  +K+H   L  + + MK E+W  LD   +  IR+ LS  VA  V  E T   LM++L+  YEKPSANNKV+L
Subjt:  EPKSFDGVMKFDGKNFGYWKMQVKDYLTCKKVH-KALKERSKDMKDEDWEALDEEAVATIRMCLSMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYL

Query:  VKKFFNMQMSEDASVNSYINEVTTLINQLKSVKIEFSDEVNAIQLLTSLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSAL-V
        +KK FN++M E+ASV  ++NE  T+ NQL SV+I+F DE+ A+ +L SLP+SWE M+  VSNSTG   LK++++ DL +AEEIRR+ +++ S  GSAL +
Subjt:  VKKFFNMQMSEDASVNSYINEVTTLINQLKSVKIEFSDEVNAIQLLTSLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSAL-V

Query:  MTKG-----------KDKVDEDNEPSSSKKKWKVGMRRASWPVRMGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKLTDDGFMCEFG
         T+G           K K ++D   + +++ +  G       V + +G      G+GDV +    G   +L  VR++P+++ NLIS+G+L D+G    F 
Subjt:  MTKG-----------KDKVDEDNEPSSSKKKWKVGMRRASWPVRMGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKLTDDGFMCEFG

Query:  SRQCKLKFGSQWMPVKAADGSCRG
                G  W   K A    RG
Subjt:  SRQCKLKFGSQWMPVKAADGSCRG

A0A438FJS0 Retrovirus-related Pol polyprotein from transposon TNT 1-94

7.8e-53

37.92

Show/hide

Query:  GVMKFDGKNFGYWKMQVKDYLTCKKVH-KALKERSKDMKDEDWEALDEEAVATIRMCLSMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYLVKKFFN
        G+ KFDG +F YW+MQ++DYL  +K+H   L  + + MK E+W  LD + +  IR+ LS  VA  V  E T   LM++L+  YEKPSANNKV+L+KK FN
Subjt:  GVMKFDGKNFGYWKMQVKDYLTCKKVH-KALKERSKDMKDEDWEALDEEAVATIRMCLSMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYLVKKFFN

Query:  MQMSEDASVNSYINEVTTLINQLKSVKIEFSDEVNAIQLLTSLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSAL-VMTKGKD
        ++M+E+ASV  ++NE  T+ NQL SV+I+F DE+ A+ +L SLP+SWE M+ AVSNSTG   LK++++ DL +AEEIRR+ + + S  GSAL + T+G++
Subjt:  MQMSEDASVNSYINEVTTLINQLKSVKIEFSDEVNAIQLLTSLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSAL-VMTKGKD

Query:  KVDE----------DNEPSSSKKKWKVGMRRA---------SWPVRMGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKLTDDGFMCE
        +V +          D+    S   +     R             V + +G      G+GDV +    G   +L  VR++P+++ NLIS+G+L D+G    
Subjt:  KVDE----------DNEPSSSKKKWKVGMRRA---------SWPVRMGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKLTDDGFMCE

Query:  FGSRQCKLKFGSQWMPVKAADGSCRGTVEPAARIAKFDQFDQDPSVQKQLGSPGEK
        F     K+  G++ +      G+   T  P   IA  D         ++LG   EK
Subjt:  FGSRQCKLKFGSQWMPVKAADGSCRGTVEPAARIAKFDQFDQDPSVQKQLGSPGEK

A0A7N2RFD8 Integrase catalytic domain-containing protein

6.4e-55

38.14

Show/hide

Query:  GVMKFDGKNFGYWKMQVKDYLTCKKVH-KALKERSKDMKDEDWEALDEEAVATIRMCLSMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYLVKKFFN
        G+ KFDG +FG+W+MQ++DYL  +K+H   L E+ + MK E+W  LD + +  IR+ LS  VA  V  E T   LM+ L   YEKPSANNKV+L+KK FN
Subjt:  GVMKFDGKNFGYWKMQVKDYLTCKKVH-KALKERSKDMKDEDWEALDEEAVATIRMCLSMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYLVKKFFN

Query:  MQMSEDASVNSYINEVTTLINQLKSVKIEFSDEVNAIQLLTSLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSAL-VMTKGKD
        ++M+E+ASV  ++NE  T+ NQL SV+I+F DE+ A+ +L SLP+SWE M+ AVSNSTG   LK++++ DL +AEEIRR+ + +    GSAL + T+G+ 
Subjt:  MQMSEDASVNSYINEVTTLINQLKSVKIEFSDEVNAIQLLTSLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSAL-VMTKGKD

Query:  KVDEDNEPSSSKKK-----------------WKVGMRRASWPVRMGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKLTDDGFMCEFG
          + ++ P  SK +                 W  G       V + +G      G+GDV +    G   +L  +R++P+++ NLIS+G+L D+G   +F 
Subjt:  KVDEDNEPSSSKKK-----------------WKVGMRRASWPVRMGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKLTDDGFMCEFG

Query:  SRQCKLKFGSQWMPVKAADGSCRGTVEPAARIAKFDQFDQDPSVQKQLGSPGEK
            K+  G++ +      G+   T  P   IA  D         ++LG   EK
Subjt:  SRQCKLKFGSQWMPVKAADGSCRGTVEPAARIAKFDQFDQDPSVQKQLGSPGEK

SwissProt top hits

e value

%identity

Alignment

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94

2.1e-26

28.71

Show/hide

Query:  VMKFDGKN-FGYWKMQVKDYLTCKKVHKALKERSK---DMKDEDWEALDEEAVATIRMCLSMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYLVKKF
        V KF+G N F  W+ +++D L  + +HK L   SK    MK EDW  LDE A + IR+ LS DV + +  E TA  +   L + Y   +  NK+YL K+ 
Subjt:  VMKFDGKN-FGYWKMQVKDYLTCKKVHKALKERSK---DMKDEDWEALDEEAVATIRMCLSMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYLVKKF

Query:  FNMQMSEDASVNSYINEVTTLINQLKSVKIEFSDEVNAIQLLTSLPDSWETMKTAVSNSTGNNTLKFSEVCD-LAIAEEIRRQGSNKESTVGSALVM---
        + + MSE  +  S++N    LI QL ++ ++  +E  AI LL SLP S++ + T + +  G  T++  +V   L + E++R++  N+    G AL+    
Subjt:  FNMQMSEDASVNSYINEVTTLINQLKSVKIEFSDEVNAIQLLTSLPDSWETMKTAVSNSTGNNTLKFSEVCD-LAIAEEIRRQGSNKESTVGSALVM---

Query:  ---------------TKGKDK-------------------------------------------------------VDEDNE---PSSSKKKWKVGMRRA
                        +GK K                                                       ++E+ E    S  + +W V    +
Subjt:  ---------------TKGKDK-------------------------------------------------------VDEDNE---PSSSKKKWKVGMRRA

Query:  --SWPVR---------------MGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKLTDDGFMCEFGSRQCKLKFGSQWMPVKAADGSC
          + PVR               MGN   SK  GIGD+ +KT  G  LVL+DVR+VP+++MNLIS   L  DG+   F +++ +L  GS    +  A G  
Subjt:  --SWPVR---------------MGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKLTDDGFMCEFGSRQCKLKFGSQWMPVKAADGSC

Query:  RGTV
        RGT+
Subjt:  RGTV

Arabidopsis top hits

e value

%identity

Alignment

AT3G29785.1 unknown protein

6.2e-10

36.36

Show/hide

Query:  KFDGKNFGYWKMQVKDYLTCKKVHKALKERSKDMKDEDWEALDEEAVATIRMCLSMDVASLVAHETTAVKLMESLTNRYEKPSANNKV
        K DG ++ + +M+++DYL  KK+H+ L ++ + M  +DW  L  + +  IR+ +S ++A  VA E +   LM+ L++ Y+KPS NN V
Subjt:  KFDGKNFGYWKMQVKDYLTCKKVHKALKERSKDMKDEDWEALDEEAVATIRMCLSMDVASLVAHETTAVKLMESLTNRYEKPSANNKV

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGGTTTTGTAGAGCCAAAAAGTTTCGATGGAGTCATGAAGTTCGATGGGAAAAATTTTGGATATTGGAAGATGCAAGTCAAAGATTACTTAACTTGCAAGAAAGTGCA
TAAGGCATTGAAGGAGAGATCGAAAGATATGAAGGACGAAGATTGGGAAGCTCTAGATGAAGAGGCAGTTGCAACAATTAGGATGTGTTTGTCGATGGATGTGGCAAGTC
TTGTAGCCCATGAGACAACTGCAGTCAAGTTGATGGAATCGCTTACAAACAGGTATGAAAAACCCTCTGCAAATAATAAGGTCTACCTAGTTAAGAAGTTTTTCAACATG
CAAATGTCTGAGGATGCTTCTGTGAATTCCTATATTAATGAGGTCACCACTTTGATTAATCAGTTAAAATCTGTTAAGATAGAATTTTCTGATGAGGTGAATGCTATTCA
GTTATTAACGTCTTTACCTGATAGTTGGGAAACGATGAAGACAGCAGTGTCTAATTCGACTGGAAATAACACTTTAAAATTTTCAGAAGTTTGTGATTTAGCCATAGCTG
AGGAAATTCGTAGGCAGGGTAGTAATAAAGAGTCTACTGTAGGGTCAGCTTTGGTTATGACTAAGGGTAAAGATAAGGTTGATGAAGATAATGAACCGAGTAGCAGTAAG
AAAAAGTGGAAAGTAGGAATGAGGAGGGCATCGTGGCCTGTGAGGATGGGGAATGGTAGAACCTCCAAGACTAGAGGGATTGGAGATGTTAGTCTGAAGACAGAATGTGG
AGGTAAATTGGTACTGCGAGATGTGAGGTACGTGCCTAATATCAAGATGAATCTTATTTCTATTGGTAAGTTGACAGATGATGGTTTCATGTGTGAGTTTGGCAGTCGCC
AGTGTAAACTCAAGTTCGGATCCCAGTGGATGCCGGTTAAAGCTGCAGATGGTAGTTGTAGAGGTACAGTTGAGCCAGCAGCAAGGATAGCCAAGTTCGATCAGTTCGAT
CAAGATCCTTCAGTTCAGAAACAATTGGGAAGTCCAGGAGAGAAAGTTGATGGCTATCGTGAATCCCCAGTTGTCAGACAGTCGAATGAATTGAAGAAGTCGCTTAGGCG
AGTTGAGGCATCAAAGTGGAAGGCCAGGGCAGTTGCTAAGGTCAAAGGTCAGGTCTCTAGCTTGGTAACAGGTTTGAACAGAGGATTCAAGCCATTCTCAGAGTGTATCT
TCTTCAGGAACATTGTTCGGGTCCACGTAGTAGCCCATACCTCGGGGCGAGCACAGATGAGCTACAATTATACTCTGATAGTTGCCTGTTTTTGTGAGTTTGTTGTTTTC
AGGTATTTTGAGCCTTGGAGTTTACCAAGAAGATCAGAGATAACAGTTGTAGTGGGAGTAGATCCTTGGAGTTTGTCAAGATGTTTAGAGTTTTTTGTTGCAGTGGGAGA
CGAGATCGTTGTTTTGTCTCCAAGTGAGAAATTGTCAGGATTTTCTCTTGGTAAGAATCTTGTCTACCAGTGTAACGCCCTAGGCCCAGGATTCGGAATCCGGATTCGAC
ACTTAAGGCCCCGACATTCCCCTGCGATCTGGCTACGTTACCATACTCGTCTTAAACTGCTTTCAAGAGTGAAAACTATCCCCACAAACCAACACGGGGTCCTTTTAGCA
TGCTTTGTCCTCACTCACATGCTTCCTAGGAAAATTCCCAAGAGGTCACCCAACATAGAACTTCTCCAAGCCAAGCACGCTTAA

mRNA sequence

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Protein sequence

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MGFVEPKSFDGVMKFDGKNFGYWKMQVKDYLTCKKVHKALKERSKDMKDEDWEALDEEAVATIRMCLSMDVASLVAHETTAVKLMESLTNRYEKPSANNKVYLVKKFFNM
QMSEDASVNSYINEVTTLINQLKSVKIEFSDEVNAIQLLTSLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESTVGSALVMTKGKDKVDEDNEPSSSK
KKWKVGMRRASWPVRMGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKLTDDGFMCEFGSRQCKLKFGSQWMPVKAADGSCRGTVEPAARIAKFDQFD
QDPSVQKQLGSPGEKVDGYRESPVVRQSNELKKSLRRVEASKWKARAVAKVKGQVSSLVTGLNRGFKPFSECIFFRNIVRVHVVAHTSGRAQMSYNYTLIVACFCEFVVF
RYFEPWSLPRRSEITVVVGVDPWSLSRCLEFFVAVGDEIVVLSPSEKLSGFSLGKNLVYQCNALGPGFGIRIRHLRPRHSPAIWLRYHTRLKLLSRVKTIPTNQHGVLLA
CFVLTHMLPRKIPKRSPNIELLQAKHA

Lag0034970 (gene) of Sponge gourd (AG-4) v1 genome