; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0034976 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0034976
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr3:13135225..13136657
RNA-Seq ExpressionLag0034976
SyntenyLag0034976
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_010695575.1 PREDICTED: uncharacterized protein LOC104908186 [Beta vulgaris subsp. vulgaris]1.5e-0433.02Show/hide
Query:  EATRCRAFALTPTGLARQWFSKIPRKSIGRRLYDGFALIAVISGLQDERLLNSIGERQPRTYTEFMTRAQRYISAEELLRSKQEEKEAEADKSSPRPMAE
        EAT CR F  T  GL   WF ++P   I     D  A  A++SGLQ  RL  ++ E + +T++E M +AQR+I A ++ R  +E  +   ++ + R   +
Subjt:  EATRCRAFALTPTGLARQWFSKIPRKSIGRRLYDGFALIAVISGLQDERLLNSIGERQPRTYTEFMTRAQRYISAEELLRSKQEEKEAEADKSSPRPMAE

Query:  ADQRPG
          +  G
Subjt:  ADQRPG

XP_022147761.1 uncharacterized protein LOC111016619 [Momordica charantia]2.6e-0429.3Show/hide
Query:  EATRCRAFALTPTGLARQWFSKIPRKSIG---------------------------------------------------RRLYDGFALIAVISGLQDER
        EA RCR F+ T TG  R WF ++ RKSI                                                      L D   L+  ISG++DE+
Subjt:  EATRCRAFALTPTGLARQWFSKIPRKSIG---------------------------------------------------RRLYDGFALIAVISGLQDER

Query:  LLNSIGERQPRTYTEFMTRAQRYISAEELLRSKQEEKEAEADKSSPRPMAEADQRPG
        L+ S G+R   T++E  +RAQ Y+S  EL+ SK++ K   AD ++ R      +RPG
Subjt:  LLNSIGERQPRTYTEFMTRAQRYISAEELLRSKQEEKEAEADKSSPRPMAEADQRPG

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]2.0e-0428.48Show/hide
Query:  EATRCRAFALTPTGLARQWFSKIPRKSIG---------------------------------------------------RRLYDGFALIAVISGLQDER
        EA RCR F+ T  G AR WF ++ R SI                                                      L D  +L+A +SG++DE 
Subjt:  EATRCRAFALTPTGLARQWFSKIPRKSIG---------------------------------------------------RRLYDGFALIAVISGLQDER

Query:  LLNSIGERQPRTYTEFMTRAQRYISAEELLRSKQEEKEAEADKSSPRPMAEADQRPGS
        L  S G+R P T++E ++RAQRY+SA E   SK   +E +  ++ P+     D+  GS
Subjt:  LLNSIGERQPRTYTEFMTRAQRYISAEELLRSKQEEKEAEADKSSPRPMAEADQRPGS

TrEMBL top hitse value%identityAlignment
A0A2N9E6S3 Ribonuclease H7.5e-0534.78Show/hide
Query:  CRAFALTPTGLARQWFSKIPRKSIG---RRLYDGFALIAVISGLQDERLLNSIGERQPRTYTEFMTRAQRYISAEELLRSKQE-----------EKEAEA
        CRAF  T  G AR WF KI   S+G   +  +D   L A ISGLQ    L S+ +  P T TE M  AQR+++ EE L ++ +           ++ AE+
Subjt:  CRAFALTPTGLARQWFSKIPRKSIG---RRLYDGFALIAVISGLQDERLLNSIGERQPRTYTEFMTRAQRYISAEELLRSKQE-----------EKEAEA

Query:  DKSSPRPMAEADQRP
         ++ P+     ++RP
Subjt:  DKSSPRPMAEADQRP

A0A6J1D3B7 uncharacterized protein LOC1110166191.3e-0429.3Show/hide
Query:  EATRCRAFALTPTGLARQWFSKIPRKSIG---------------------------------------------------RRLYDGFALIAVISGLQDER
        EA RCR F+ T TG  R WF ++ RKSI                                                      L D   L+  ISG++DE+
Subjt:  EATRCRAFALTPTGLARQWFSKIPRKSIG---------------------------------------------------RRLYDGFALIAVISGLQDER

Query:  LLNSIGERQPRTYTEFMTRAQRYISAEELLRSKQEEKEAEADKSSPRPMAEADQRPG
        L+ S G+R   T++E  +RAQ Y+S  EL+ SK++ K   AD ++ R      +RPG
Subjt:  LLNSIGERQPRTYTEFMTRAQRYISAEELLRSKQEEKEAEADKSSPRPMAEADQRPG

A0A6J1D9E1 uncharacterized protein LOC1110188236.4e-0430Show/hide
Query:  EATRCRAFALTPTGLARQWFSKIPRKSIGRRLYDGFALIAVISGLQDERLLNSIGERQPRTYTEFMTRAQRYISAEELLRSKQEEKEAEADKSSPRPMAE
        +A +CRAF +  TG AR WF +   K    +  D  A+   ++GL DE L   +G+  P T+ E + +A++ I  +ELLR+K    E   D+       +
Subjt:  EATRCRAFALTPTGLARQWFSKIPRKSIGRRLYDGFALIAVISGLQDERLLNSIGERQPRTYTEFMTRAQRYISAEELLRSKQEEKEAEADKSSPRPMAE

Query:  ADQRPGSLGVVQNQKPGQGKGGVNPPLELR
        AD +    G   + +  + +  VN P   R
Subjt:  ADQRPGSLGVVQNQKPGQGKGGVNPPLELR

A0A6J1DWY0 uncharacterized protein LOC1110252939.8e-0528.48Show/hide
Query:  EATRCRAFALTPTGLARQWFSKIPRKSIG---------------------------------------------------RRLYDGFALIAVISGLQDER
        EA RCR F+ T  G AR WF ++ R SI                                                      L D  +L+A +SG++DE 
Subjt:  EATRCRAFALTPTGLARQWFSKIPRKSIG---------------------------------------------------RRLYDGFALIAVISGLQDER

Query:  LLNSIGERQPRTYTEFMTRAQRYISAEELLRSKQEEKEAEADKSSPRPMAEADQRPGS
        L  S G+R P T++E ++RAQRY+SA E   SK   +E +  ++ P+     D+  GS
Subjt:  LLNSIGERQPRTYTEFMTRAQRYISAEELLRSKQEEKEAEADKSSPRPMAEADQRPGS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCCCCAGTTTCTACAAATTCACCATTGATGTCACGTGAAGGTCAGGTGAGTCCCTTGGCCAAATTTTGGCATCAACAGTTGGCGCTGTCTGTGGGAAAGAGTGC
TGGCCAGTTCAGACCGCGCATCGGCGGTGGTCTGCAGGAGGATCGGGTTCAGAAACCAAAAGAAACCTCGGGTTCCGTGTGCCCACGATGCTGTGGACCTAACCCAAGAG
GACAACCAGCAGAAGAACTGGAGTCTGTGCCACTAACGTCTGAGGAAATGCTAAGGTCTAAGCAGAAGGAGAGAGAGAGCCGAGAAGTTTCTGTATTCGACCAGCATCGA
GAAGTCAGAGGAAAAGGACGCCAGGTAGAAGATGGAGGCCAGATCCGACATGAGCACTCCTCGGTCGATGATCGAGGTCGAGCAGAAGCCCAATCGCACACAGGGAATAA
TGACAGGAAAAAGTCAGAGGCTCGGGCAAAGTCTGAGGCCGAGCAGGGCCAAAAGGGGCGAGAGCCATCCAAATGGCTAAAAGACGAAGCGACAAGGTGTCGAGCCTTCG
CACTAACACCCACAGGTTTGGCAAGGCAATGGTTTAGTAAGATCCCACGGAAGTCAATCGGTAGAAGGCTATACGATGGATTTGCCTTGATTGCTGTGATTTCAGGTCTA
CAGGATGAAAGACTGCTCAACTCGATCGGTGAGAGACAGCCACGAACATACACAGAATTCATGACCCGAGCACAAAGGTACATAAGCGCCGAGGAACTACTGAGGTCCAA
ACAAGAAGAGAAAGAGGCCGAAGCCGACAAGAGCAGTCCTCGGCCAATGGCTGAGGCCGACCAGAGACCAGGGAGCCTCGGGGTCGTGCAGAACCAAAAACCAGGTCAAG
GTAAAGGCGGTGTCAACCCACCGCTCGAGTTACGTACAATTTTAGGAGGACCATCCGGTGGAGAGTCAGACAGAAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTTCCCCAGTTTCTACAAATTCACCATTGATGTCACGTGAAGGTCAGGTGAGTCCCTTGGCCAAATTTTGGCATCAACAGTTGGCGCTGTCTGTGGGAAAGAGTGC
TGGCCAGTTCAGACCGCGCATCGGCGGTGGTCTGCAGGAGGATCGGGTTCAGAAACCAAAAGAAACCTCGGGTTCCGTGTGCCCACGATGCTGTGGACCTAACCCAAGAG
GACAACCAGCAGAAGAACTGGAGTCTGTGCCACTAACGTCTGAGGAAATGCTAAGGTCTAAGCAGAAGGAGAGAGAGAGCCGAGAAGTTTCTGTATTCGACCAGCATCGA
GAAGTCAGAGGAAAAGGACGCCAGGTAGAAGATGGAGGCCAGATCCGACATGAGCACTCCTCGGTCGATGATCGAGGTCGAGCAGAAGCCCAATCGCACACAGGGAATAA
TGACAGGAAAAAGTCAGAGGCTCGGGCAAAGTCTGAGGCCGAGCAGGGCCAAAAGGGGCGAGAGCCATCCAAATGGCTAAAAGACGAAGCGACAAGGTGTCGAGCCTTCG
CACTAACACCCACAGGTTTGGCAAGGCAATGGTTTAGTAAGATCCCACGGAAGTCAATCGGTAGAAGGCTATACGATGGATTTGCCTTGATTGCTGTGATTTCAGGTCTA
CAGGATGAAAGACTGCTCAACTCGATCGGTGAGAGACAGCCACGAACATACACAGAATTCATGACCCGAGCACAAAGGTACATAAGCGCCGAGGAACTACTGAGGTCCAA
ACAAGAAGAGAAAGAGGCCGAAGCCGACAAGAGCAGTCCTCGGCCAATGGCTGAGGCCGACCAGAGACCAGGGAGCCTCGGGGTCGTGCAGAACCAAAAACCAGGTCAAG
GTAAAGGCGGTGTCAACCCACCGCTCGAGTTACGTACAATTTTAGGAGGACCATCCGGTGGAGAGTCAGACAGAAAGTGA
Protein sequenceShow/hide protein sequence
MSSPVSTNSPLMSREGQVSPLAKFWHQQLALSVGKSAGQFRPRIGGGLQEDRVQKPKETSGSVCPRCCGPNPRGQPAEELESVPLTSEEMLRSKQKERESREVSVFDQHR
EVRGKGRQVEDGGQIRHEHSSVDDRGRAEAQSHTGNNDRKKSEARAKSEAEQGQKGREPSKWLKDEATRCRAFALTPTGLARQWFSKIPRKSIGRRLYDGFALIAVISGL
QDERLLNSIGERQPRTYTEFMTRAQRYISAEELLRSKQEEKEAEADKSSPRPMAEADQRPGSLGVVQNQKPGQGKGGVNPPLELRTILGGPSGGESDRK