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Lag0034995 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0034995
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr3:13424299..13424778
RNA-Seq ExpressionLag0034995
SyntenyLag0034995
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN74951.1 hypothetical protein VITISV_030567, partial [Vitis vinifera]9.4e-1131.9Show/hide
Query:  KNLIRVSQLTQDNFVFVEFHDGFCFVKEKISNEVCMIGKLGNDLYKLLDQHEASNKKLFSATE-----VPTFTFGEVTKTVQTFRAENGKMLNLVQYTLL
        KNLI V++ TQDN V +EF    CFVK+K S E+ + G L   LY+L     +SN++    +E     +P       T   Q+     G  L + +    
Subjt:  KNLIRVSQLTQDNFVFVEFHDGFCFVKEKISNEVCMIGKLGNDLYKLLDQHEASNKKLFSATE-----VPTFTFGEVTKTVQTFRAENGKMLNLVQYTLL

Query:  TCKVD-------LWHKRHGHPSPKVLHQILDLCNAPVKRNEKFSFVRLISLENPTVFPLPILI
         C  D       LWH+R GHP  K++  +LD      K   + +F     L     FPLP  I
Subjt:  TCKVD-------LWHKRHGHPSPKVLHQILDLCNAPVKRNEKFSFVRLISLENPTVFPLPILI

KYP50444.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]1.6e-1030.83Show/hide
Query:  KNLIRVSQLTQDNFVFVEFHDGFCFVKEKISNEVCMIGKLGNDLYKLLDQHEASNKKLFSATEVPTFTFGEVTKTVQTFRAENGKMLNLVQYTLLTCKVD
        KNL+ +S+LT DN ++VEFHD  CFVK+K++  + + GK+ + LY+L     ++NK+           F  + +T                         
Subjt:  KNLIRVSQLTQDNFVFVEFHDGFCFVKEKISNEVCMIGKLGNDLYKLLDQHEASNKKLFSATEVPTFTFGEVTKTVQTFRAENGKMLNLVQYTLLTCKVD

Query:  LWHKRHGHPSPKVLHQILDLCNAPVKRNEKFSF
         WH++ GHP+ KVL++++ LCN      E F F
Subjt:  LWHKRHGHPSPKVLHQILDLCNAPVKRNEKFSF

KZV26181.1 hypothetical protein F511_06348 [Dorcoceras hygrometricum]1.6e-1033.11Show/hide
Query:  KNLIRVSQLTQDNFVFVEFHDGFCFVKEKISNEVCMIGKLGNDLYKLLDQHEASNKKLFSATEVPTFTFGEVTKTVQTFRAENGKMLNLVQYTLLTCKVD
        KNLI VS+   DN V+ EFH  FC VK+  ++ V + G L N LY+           L S    P  +   +  +V   +  +   L L Q TL     D
Subjt:  KNLIRVSQLTQDNFVFVEFHDGFCFVKEKISNEVCMIGKLGNDLYKLLDQHEASNKKLFSATEVPTFTFGEVTKTVQTFRAENGKMLNLVQYTLLTCKVD

Query:  LWHKRHGHPSPKVLHQILDLCNAPVKRNEKFSFVRLISLENPTVFPLP
         WH R GHPS   + Q+L  CN  + +N+  SF     L    + P P
Subjt:  LWHKRHGHPSPKVLHQILDLCNAPVKRNEKFSFVRLISLENPTVFPLP

RVX01179.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]9.4e-1133.74Show/hide
Query:  KNLIRVSQLTQDNFVFVEFHDGFCFVKEKISNEVCMIGKLGNDLYKLLDQHEASNKK---LFSATEV--PTFTFGEVTKTVQTFRAENGKMLNLVQYTLL
        KNLI V++ TQDN V +EF    CFVK+K S E+ + G L   LY+L     +SN++    F  T V  P       T   Q+     G  L + +    
Subjt:  KNLIRVSQLTQDNFVFVEFHDGFCFVKEKISNEVCMIGKLGNDLYKLLDQHEASNKK---LFSATEV--PTFTFGEVTKTVQTFRAENGKMLNLVQYTLL

Query:  TCKVD-------LWHKRHGHPSPKVLHQILDLCNAPVKRNEKFSFVRLISLENPTVFPLPILI
         C  D       LWH+R GHP  K++  +LD      K   + SF     L     FPLP  I
Subjt:  TCKVD-------LWHKRHGHPSPKVLHQILDLCNAPVKRNEKFSFVRLISLENPTVFPLPILI

TXG52359.1 hypothetical protein EZV62_021528 [Acer yangbiense]4.2e-1136.96Show/hide
Query:  MKKNLIRVSQLTQDNFVFVEFHDGFCFVKEKISNEVCMIGKLGNDLYKLLDQHEASNKKLFSATEVPTFTFGEVTKTVQ---TFRAENGKMLNLVQYTLL
        ++KNLI +SQLT  N VF+EF+   C VK+K+   V + GKL + LY  LD     N+   S  EV T +F   T ++           K +  V    L
Subjt:  MKKNLIRVSQLTQDNFVFVEFHDGFCFVKEKISNEVCMIGKLGNDLYKLLDQHEASNKKLFSATEVPTFTFGEVTKTVQ---TFRAENGKMLNLVQYTLL

Query:  TCKVDLWHKRHGHPSPKVLHQILDLCNAPVKRNEKFSF
            + WH+   HPS KVL Q+L+ CN  +K N  F+F
Subjt:  TCKVDLWHKRHGHPSPKVLHQILDLCNAPVKRNEKFSF

TrEMBL top hitse value%identityAlignment
A0A5C7H6K5 Integrase catalytic domain-containing protein2.0e-1136.96Show/hide
Query:  MKKNLIRVSQLTQDNFVFVEFHDGFCFVKEKISNEVCMIGKLGNDLYKLLDQHEASNKKLFSATEVPTFTFGEVTKTVQ---TFRAENGKMLNLVQYTLL
        ++KNLI +SQLT  N VF+EF+   C VK+K+   V + GKL + LY  LD     N+   S  EV T +F   T ++           K +  V    L
Subjt:  MKKNLIRVSQLTQDNFVFVEFHDGFCFVKEKISNEVCMIGKLGNDLYKLLDQHEASNKKLFSATEVPTFTFGEVTKTVQ---TFRAENGKMLNLVQYTLL

Query:  TCKVDLWHKRHGHPSPKVLHQILDLCNAPVKRNEKFSF
            + WH+   HPS KVL Q+L+ CN  +K N  F+F
Subjt:  TCKVDLWHKRHGHPSPKVLHQILDLCNAPVKRNEKFSF

A0A803P4G6 Uncharacterized protein1.3e-1337.59Show/hide
Query:  KNLIRVSQLTQDNFVFVEFHDGFCFVKEKISNEVCMIGKLGNDLYKLLDQHEASNKKLFSATEVPTFTFGEVTKTVQTFRAENGKMLNLVQYTLLTCKVD
        KNLI V +LT DN V +EF+   C VK+K + +V + G L + LY++   H      L S     T T    + +V      N  +   V    L  K+D
Subjt:  KNLIRVSQLTQDNFVFVEFHDGFCFVKEKISNEVCMIGKLGNDLYKLLDQHEASNKKLFSATEVPTFTFGEVTKTVQTFRAENGKMLNLVQYTLLTCKVD

Query:  LWHKRHGHPSPKVLHQILDLCNAPVKRNEKFSF
        +WH+R GHPS KVL Q+L+  N  V RNE  +F
Subjt:  LWHKRHGHPSPKVLHQILDLCNAPVKRNEKFSF

A0A803P5A9 Uncharacterized protein7.0e-1234.81Show/hide
Query:  MKKNLIRVSQLTQDNFVFVEFHDGFCFVKEKISNEVCMIGKLGNDLYKLLDQHEASNKKLFSATEVPTFTFGEVTKTVQTFRAENGKMLNLVQYTLLTCK
        M K LI +S+LT DN + +EF   FCFVK+K++ +V + G L + LY+L   +   +K +   T+    T   V        A   +  N +       K
Subjt:  MKKNLIRVSQLTQDNFVFVEFHDGFCFVKEKISNEVCMIGKLGNDLYKLLDQHEASNKKLFSATEVPTFTFGEVTKTVQTFRAENGKMLNLVQYTLLTCK

Query:  VDLWHKRHGHPSPKVLHQILDLCNAPVKRNEKFSF
         D+WH+R GHPS K+L  +L+  N PV  N   SF
Subjt:  VDLWHKRHGHPSPKVLHQILDLCNAPVKRNEKFSF

A0A803QD60 Uncharacterized protein1.4e-1233.82Show/hide
Query:  KNLIRVSQLTQDNFVFVEFHDGFCFVKEKISNEVCMIGKLGNDLYKL-LDQHEASNKKL--FSATEVPTFTFGEVTKTVQTFRAENGKMLNLVQYTLLTC
        KNL+ VS+LT DN V +EF+   C VK+K++ +V + G L + LY+L   Q + + +      + +V + +F  V    ++ R ++  + +LV       
Subjt:  KNLIRVSQLTQDNFVFVEFHDGFCFVKEKISNEVCMIGKLGNDLYKL-LDQHEASNKKL--FSATEVPTFTFGEVTKTVQTFRAENGKMLNLVQYTLLTC

Query:  KVDLWHKRHGHPSPKVLHQILDLCNAPVKRNEKFSF
        K D+W +R GHPSP+VL Q+L+ C   + +NE   F
Subjt:  KVDLWHKRHGHPSPKVLHQILDLCNAPVKRNEKFSF

A5BSC1 Uncharacterized protein (Fragment)4.6e-1131.9Show/hide
Query:  KNLIRVSQLTQDNFVFVEFHDGFCFVKEKISNEVCMIGKLGNDLYKLLDQHEASNKKLFSATE-----VPTFTFGEVTKTVQTFRAENGKMLNLVQYTLL
        KNLI V++ TQDN V +EF    CFVK+K S E+ + G L   LY+L     +SN++    +E     +P       T   Q+     G  L + +    
Subjt:  KNLIRVSQLTQDNFVFVEFHDGFCFVKEKISNEVCMIGKLGNDLYKLLDQHEASNKKLFSATE-----VPTFTFGEVTKTVQTFRAENGKMLNLVQYTLL

Query:  TCKVD-------LWHKRHGHPSPKVLHQILDLCNAPVKRNEKFSFVRLISLENPTVFPLPILI
         C  D       LWH+R GHP  K++  +LD      K   + +F     L     FPLP  I
Subjt:  TCKVD-------LWHKRHGHPSPKVLHQILDLCNAPVKRNEKFSFVRLISLENPTVFPLPILI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAAGAACCTAATCCGTGTTTCTCAGTTAACTCAAGACAACTTTGTCTTTGTCGAATTTCATGATGGTTTTTGTTTTGTTAAGGAAAAGATATCCAATGAAGTGTG
CATGATAGGGAAGCTTGGGAATGACCTTTATAAACTTTTGGATCAACATGAAGCCTCCAACAAGAAGCTGTTCTCGGCCACTGAAGTTCCAACTTTTACTTTTGGCGAGG
TTACAAAAACTGTGCAGACCTTCAGGGCAGAAAATGGAAAGATGCTTAACTTAGTTCAATATACTTTGTTGACTTGTAAGGTGGATCTATGGCACAAACGGCATGGTCAT
CCATCCCCAAAAGTATTACATCAAATTCTTGATCTTTGTAATGCCCCAGTTAAACGTAATGAAAAATTCTCTTTTGTGAGGCTTATAAGTTTGGAAAATCCCACTGTCTT
CCCTTTACCAATTCTGATTCTAGAGCACTACATGTATTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAAAGAACCTAATCCGTGTTTCTCAGTTAACTCAAGACAACTTTGTCTTTGTCGAATTTCATGATGGTTTTTGTTTTGTTAAGGAAAAGATATCCAATGAAGTGTG
CATGATAGGGAAGCTTGGGAATGACCTTTATAAACTTTTGGATCAACATGAAGCCTCCAACAAGAAGCTGTTCTCGGCCACTGAAGTTCCAACTTTTACTTTTGGCGAGG
TTACAAAAACTGTGCAGACCTTCAGGGCAGAAAATGGAAAGATGCTTAACTTAGTTCAATATACTTTGTTGACTTGTAAGGTGGATCTATGGCACAAACGGCATGGTCAT
CCATCCCCAAAAGTATTACATCAAATTCTTGATCTTTGTAATGCCCCAGTTAAACGTAATGAAAAATTCTCTTTTGTGAGGCTTATAAGTTTGGAAAATCCCACTGTCTT
CCCTTTACCAATTCTGATTCTAGAGCACTACATGTATTAG
Protein sequenceShow/hide protein sequence
MKKNLIRVSQLTQDNFVFVEFHDGFCFVKEKISNEVCMIGKLGNDLYKLLDQHEASNKKLFSATEVPTFTFGEVTKTVQTFRAENGKMLNLVQYTLLTCKVDLWHKRHGH
PSPKVLHQILDLCNAPVKRNEKFSFVRLISLENPTVFPLPILILEHYMY