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Lag0034996 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0034996
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGag/pol polyprotein-maize retrotransposon Hopscotch
Genome locationchr3:13424971..13425606
RNA-Seq ExpressionLag0034996
SyntenyLag0034996
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
QWX09785.1 hydroxymethylglutaryl-CoA synthase [Pistacia terebinthus subsp. palaestina]8.3e-0838.64Show/hide
Query:  MHEYLDTIKRYFDNLQVAGFPMDMRNFVSHVTSGLDEEYTPIVCVI-RSQNFSWSEIQLELFSFEQTLERLQALK-GNISVNLNSTHL
        M EYL T+K + DNL +AG P+ + + ++ +  GLD EYTPIV  +   ++ SW E+Q  L +FE  LE+L   + G I+++  + H+
Subjt:  MHEYLDTIKRYFDNLQVAGFPMDMRNFVSHVTSGLDEEYTPIVCVI-RSQNFSWSEIQLELFSFEQTLERLQALK-GNISVNLNSTHL

TXG47047.1 hypothetical protein EZV62_026341 [Acer yangbiense]2.2e-0838.61Show/hide
Query:  MHEYLDTIKRYFDNLQVAGFPMDMRNFVSHVTSGLD-EEYTPIVCVI-RSQNFSWSEIQLELFSFEQTLERLQALKGNISVNLNSTHLPSVNVANAEGTR
        M +YL   KR  DNL +AG P+ + + VS + +GLD  EY P+VC I   ++ SW ++Q +L S+E+ LE++ A  G  S+NL       V   N  GT+
Subjt:  MHEYLDTIKRYFDNLQVAGFPMDMRNFVSHVTSGLD-EEYTPIVCVI-RSQNFSWSEIQLELFSFEQTLERLQALKGNISVNLNSTHLPSVNVANAEGTR

Query:  Q
        +
Subjt:  Q

TXG47862.1 hypothetical protein EZV62_027156 [Acer yangbiense]1.7e-0837.96Show/hide
Query:  MHEYLDTIKRYFDNLQVAGFPMDMRNFVSHVTSGLD-EEYTPIVCVI-RSQNFSWSEIQLELFSFEQTLERLQALKGNISVNLNSTHLPSVNVANAEGTR
        M +YL   KR  DNL +AG P+ +++ VS + +GLD  EY P+VC I   ++ SW ++Q +L S+E+ LE++ A  G  S+NL       V   N  G  
Subjt:  MHEYLDTIKRYFDNLQVAGFPMDMRNFVSHVTSGLD-EEYTPIVCVI-RSQNFSWSEIQLELFSFEQTLERLQALKGNISVNLNSTHLPSVNVANAEGTR

Query:  QPSHGQNT
          + GQ T
Subjt:  QPSHGQNT

XP_022151683.1 uncharacterized protein LOC111019598 [Momordica charantia]1.6e-1134.64Show/hide
Query:  MHEYLDTIKRYFDNLQVAGFPMDMRNFVSHVTSGLDEEYTPIVCVIRSQ-NFSWSEIQLELFSFEQTLERLQALKGNISVNLNSTHLPSVNVANAEGTRQ
        M EYL  +K + DNL +AG  + +R+ VS V +GLDEEY PIV  ++ + N SWSE+  EL ++E+ LE   +LK  I +  N T  PSVN  +    + 
Subjt:  MHEYLDTIKRYFDNLQVAGFPMDMRNFVSHVTSGLDEEYTPIVCVIRSQ-NFSWSEIQLELFSFEQTLERLQALKGNISVNLNSTHLPSVNVANAEGTRQ

Query:  PSHGQNTNHFQSSRNDSSANNNHQNRGY-GSKRGNRYDKADCSPSGAPPANTAHSSPPESSTTNPTTLMAYPETLQDPS
              TN   ++ N+S  +N H+  GY     G R       P+       ++S P   +  + +T +  PET+ DPS
Subjt:  PSHGQNTNHFQSSRNDSSANNNHQNRGY-GSKRGNRYDKADCSPSGAPPANTAHSSPPESSTTNPTTLMAYPETLQDPS

XP_038875081.1 uncharacterized protein LOC120067610 [Benincasa hispida]4.0e-1039.52Show/hide
Query:  MHEYLDTIKRYFDNLQVAGFPMDMRNFVSHVTSGLDEEYTPIVCVIRSQNFS-WSEIQLELFSFEQTLERLQALKGNISVNLN---STHLPSVNVANAEG
        M EYL   K+Y DNL  AG PM   + +S V SGLDEEY P+V  ++S+  + WS++Q +L S+E+ LE   A+K NI+   N   S++ PSVNV     
Subjt:  MHEYLDTIKRYFDNLQVAGFPMDMRNFVSHVTSGLDEEYTPIVCVIRSQNFS-WSEIQLELFSFEQTLERLQALKGNISVNLN---STHLPSVNVANAEG

Query:  TRQPSHGQNTNHFQSSRNDSSANN
          Q S    +N +++S  ++ ++N
Subjt:  TRQPSHGQNTNHFQSSRNDSSANN

TrEMBL top hitse value%identityAlignment
A0A2Z7BJW9 Uncharacterized protein (Fragment)4.4e-0734.38Show/hide
Query:  MHEYLDTIKRYFDNLQVAGFPMDMRNFVSHVTSGLDEEYTPIVCVIRSQ-NFSWSEIQLELFSFEQTLERLQALK-GNISVNLNSTHLPSVNVANAEGTR
        M EYL T+K   DNL +AG P+ + + +  + SGLD EYTPIV ++  + + SW E+Q  L ++E  LE+L   +   I  N  S H  + +  N   T 
Subjt:  MHEYLDTIKRYFDNLQVAGFPMDMRNFVSHVTSGLDEEYTPIVCVIRSQ-NFSWSEIQLELFSFEQTLERLQALK-GNISVNLNSTHLPSVNVANAEGTR

Query:  QPSHGQNTNHFQSSRNDSSANNNHQNRG
            GQN  +     N   A    + RG
Subjt:  QPSHGQNTNHFQSSRNDSSANNNHQNRG

A0A5C7GU53 Uncharacterized protein8.1e-0937.96Show/hide
Query:  MHEYLDTIKRYFDNLQVAGFPMDMRNFVSHVTSGLD-EEYTPIVCVI-RSQNFSWSEIQLELFSFEQTLERLQALKGNISVNLNSTHLPSVNVANAEGTR
        M +YL   KR  DNL +AG P+ +++ VS + +GLD  EY P+VC I   ++ SW ++Q +L S+E+ LE++ A  G  S+NL       V   N  G  
Subjt:  MHEYLDTIKRYFDNLQVAGFPMDMRNFVSHVTSGLD-EEYTPIVCVI-RSQNFSWSEIQLELFSFEQTLERLQALKGNISVNLNSTHLPSVNVANAEGTR

Query:  QPSHGQNT
          + GQ T
Subjt:  QPSHGQNT

A0A6J1DCW4 uncharacterized protein LOC1110195987.8e-1234.64Show/hide
Query:  MHEYLDTIKRYFDNLQVAGFPMDMRNFVSHVTSGLDEEYTPIVCVIRSQ-NFSWSEIQLELFSFEQTLERLQALKGNISVNLNSTHLPSVNVANAEGTRQ
        M EYL  +K + DNL +AG  + +R+ VS V +GLDEEY PIV  ++ + N SWSE+  EL ++E+ LE   +LK  I +  N T  PSVN  +    + 
Subjt:  MHEYLDTIKRYFDNLQVAGFPMDMRNFVSHVTSGLDEEYTPIVCVIRSQ-NFSWSEIQLELFSFEQTLERLQALKGNISVNLNSTHLPSVNVANAEGTRQ

Query:  PSHGQNTNHFQSSRNDSSANNNHQNRGY-GSKRGNRYDKADCSPSGAPPANTAHSSPPESSTTNPTTLMAYPETLQDPS
              TN   ++ N+S  +N H+  GY     G R       P+       ++S P   +  + +T +  PET+ DPS
Subjt:  PSHGQNTNHFQSSRNDSSANNNHQNRGY-GSKRGNRYDKADCSPSGAPPANTAHSSPPESSTTNPTTLMAYPETLQDPS

A0A803NG64 Uncharacterized protein2.5e-1037.23Show/hide
Query:  MHEYLDTIKRYFDNLQVAGFPMDMRNFVSHVTSGLDEEYTPIVCVIRSQ-NFSWSEIQLELFSFEQTLERLQALKGNI-SVNLNSTHLPSVNVANAEGTR
        M EYL   K + D+L +AG P      +S+VTSGLD EY PIV  I ++ + +W E+Q  L +F+  +ERLQ L  N  + + NS+  P+ N+AN   T 
Subjt:  MHEYLDTIKRYFDNLQVAGFPMDMRNFVSHVTSGLDEEYTPIVCVIRSQ-NFSWSEIQLELFSFEQTLERLQALKGNI-SVNLNSTHLPSVNVANAEGTR

Query:  QPSHGQ---NTNHFQSSRNDSSANNNHQNRGYGSKRG
            G    N NH+ S++N +     + +RG G++ G
Subjt:  QPSHGQ---NTNHFQSSRNDSSANNNHQNRGYGSKRG

A0A803PAZ1 Uncharacterized protein2.6e-0735.29Show/hide
Query:  MHEYLDTIKRYFDNLQVAGFPMDMRNFVSHVTSGLDEEYTPIVCVIRSQ---NFSWSEIQLELFSFEQTLERLQALKGNISVNLNSTHLPSVNVANAEGT
        M +YL   + + D+L +AG P    + +++V SGLD EY  IVC + +Q     +W E+Q  L SF+  LERL  L        NS   PS  +AN + T
Subjt:  MHEYLDTIKRYFDNLQVAGFPMDMRNFVSHVTSGLDEEYTPIVCVIRSQ---NFSWSEIQLELFSFEQTLERLQALKGNISVNLNSTHLPSVNVANAEGT

Query:  RQPSHGQNTNHFQSSRNDSSANNNHQNRGYGSKRGN
                  H+ S R +S+ +NN+  RG    RGN
Subjt:  RQPSHGQNTNHFQSSRNDSSANNNHQNRGYGSKRGN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACGAATACTTAGACACTATAAAAAGGTACTTCGACAACCTTCAAGTAGCTGGTTTTCCAATGGACATGAGGAATTTTGTGTCCCATGTCACTTCTGGATTAGATGA
AGAATACACTCCCATAGTATGTGTGATAAGAAGTCAAAACTTCTCATGGAGTGAGATACAACTTGAACTTTTTTCATTTGAGCAAACATTGGAGAGGCTACAGGCACTCA
AAGGCAATATCTCAGTGAACCTCAACTCAACTCACCTCCCCTCTGTCAATGTAGCTAATGCTGAAGGCACAAGACAACCATCTCACGGTCAAAATACCAACCATTTCCAG
TCGAGTAGAAACGACTCCTCTGCTAACAACAACCATCAGAATCGAGGATATGGTTCAAAGAGAGGAAATAGGTATGATAAAGCTGATTGTTCACCTTCTGGAGCTCCTCC
CGCCAACACTGCCCATTCTTCACCACCGGAGTCAAGCACCACCAATCCCACAACCTTGATGGCCTATCCTGAGACTCTCCAAGATCCATCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCACGAATACTTAGACACTATAAAAAGGTACTTCGACAACCTTCAAGTAGCTGGTTTTCCAATGGACATGAGGAATTTTGTGTCCCATGTCACTTCTGGATTAGATGA
AGAATACACTCCCATAGTATGTGTGATAAGAAGTCAAAACTTCTCATGGAGTGAGATACAACTTGAACTTTTTTCATTTGAGCAAACATTGGAGAGGCTACAGGCACTCA
AAGGCAATATCTCAGTGAACCTCAACTCAACTCACCTCCCCTCTGTCAATGTAGCTAATGCTGAAGGCACAAGACAACCATCTCACGGTCAAAATACCAACCATTTCCAG
TCGAGTAGAAACGACTCCTCTGCTAACAACAACCATCAGAATCGAGGATATGGTTCAAAGAGAGGAAATAGGTATGATAAAGCTGATTGTTCACCTTCTGGAGCTCCTCC
CGCCAACACTGCCCATTCTTCACCACCGGAGTCAAGCACCACCAATCCCACAACCTTGATGGCCTATCCTGAGACTCTCCAAGATCCATCGTAG
Protein sequenceShow/hide protein sequence
MHEYLDTIKRYFDNLQVAGFPMDMRNFVSHVTSGLDEEYTPIVCVIRSQNFSWSEIQLELFSFEQTLERLQALKGNISVNLNSTHLPSVNVANAEGTRQPSHGQNTNHFQ
SSRNDSSANNNHQNRGYGSKRGNRYDKADCSPSGAPPANTAHSSPPESSTTNPTTLMAYPETLQDPS