; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0035025 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0035025
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr3:13741678..13743347
RNA-Seq ExpressionLag0035025
SyntenyLag0035025
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_017239525.1 PREDICTED: uncharacterized protein LOC108212308 [Daucus carota subsp. sativus]1.5e-3444.56Show/hide
Query:  INRFWLGSDESKRKMHWRRWSDFYKPKESGALNFRDLEYFNQAMLAKQVWRGFVWGLDLLKGGVRRNLGNGQSIKIFTEPWIPCPTTFKVLMVKGQTNVE
        + RFW G D  K  ++WR+W    K K  G + FRDL+ FN A+LAKQ WR  + G D+L  G+R  +GNG+SI  + + WIP    F V   KG  NV 
Subjt:  INRFWLGSDESKRKMHWRRWSDFYKPKESGALNFRDLEYFNQAMLAKQVWRGFVWGLDLLKGGVRRNLGNGQSIKIFTEPWIPCPTTFKVLMVKGQTNVE

Query:  MRVAEFITPSFQWDVTKLSQFLCDEDVNVISHLPISRP-APDKWIWHYDRKGKYTVKSGYKFRMLDQQASSTSSAEAESN----WWKKLWNWS
          VA+FI+ S +W+++KL + + D+ V+ IS +PISR  A D+ +WH+D KG YTVKSGY +  L  + SST  A + SN    +WK LW+ S
Subjt:  MRVAEFITPSFQWDVTKLSQFLCDEDVNVISHLPISRP-APDKWIWHYDRKGKYTVKSGYKFRMLDQQASSTSSAEAESN----WWKKLWNWS

XP_017250619.1 PREDICTED: uncharacterized protein LOC108221234 [Daucus carota subsp. sativus]2.0e-3135.75Show/hide
Query:  RFWLGSDESKRKMHWRRWSDFYKPKESGALNFRDLEYFNQAMLAKQ-------------------------------------VWRGFVWGLDLLKGGVR
        R+W GS  SKRK+HWR W+    PK  G L FR   ++NQA+LAKQ                                      WR  VWG  LL  G+R
Subjt:  RFWLGSDESKRKMHWRRWSDFYKPKESGALNFRDLEYFNQAMLAKQ-------------------------------------VWRGFVWGLDLLKGGVR

Query:  RNLGNGQSIKIFTEPWIPCPTTFKVLMVKGQTNVEMRVAEFITPSFQWDVTKLSQFLCDEDVNVISHLPISR-PAPDKWIWHYDRKGKYTVKSGYKFRML
        R +GNGQS + F +PW+  P +F  L +   +  E++V E+IT    W+   + Q     D+ +I  +P+SR    D W WHY+ +G YTVKSGYK    
Subjt:  RNLGNGQSIKIFTEPWIPCPTTFKVLMVKGQTNVEMRVAEFITPSFQWDVTKLSQFLCDEDVNVISHLPISR-PAPDKWIWHYDRKGKYTVKSGYKFRML

Query:  DQQASSTSSAEAESNWWKKLW
          +  S+SS +    WWK  W
Subjt:  DQQASSTSSAEAESNWWKKLW

XP_022131662.1 uncharacterized protein LOC111004787 [Momordica charantia]2.1e-3339.9Show/hide
Query:  RFWLGSDESKRKMHWRRWSDFYKPKESGALNFRDLEYFNQAMLAKQVWR-------------------------------------GFVWGLDLLKGGVR
        RFW GS    +K+HW  W     PKE G LNFRDLE FNQA++AKQVWR                                     GF+WG DLL  G+R
Subjt:  RFWLGSDESKRKMHWRRWSDFYKPKESGALNFRDLEYFNQAMLAKQVWR-------------------------------------GFVWGLDLLKGGVR

Query:  RNLGNGQSIKIFTEPWIPCPTTFKVLMVKGQTNVEMRVAEFITPSFQWDVTKLSQFLCDEDVNVISHLPIS-RPAPDKWIWHYDRKGKYTVKS
          +GNG +I IF++PWIP P +F+ +        +++VA+ I P+ QWDV  +S   C+ED ++I  +P+S   + D WIWH+D++G Y VKS
Subjt:  RNLGNGQSIKIFTEPWIPCPTTFKVLMVKGQTNVEMRVAEFITPSFQWDVTKLSQFLCDEDVNVISHLPIS-RPAPDKWIWHYDRKGKYTVKS

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]2.7e-3639.34Show/hide
Query:  RKMHWRRWSDFYKPKESGALNFRDLEYFNQAMLAKQVWR-------------------------------------GFVWGLDLLKGGVRRNLGNGQSIK
        RK+HW +W     PKE G LNFRDLE FNQA++AK VWR                                     GF+WG DLL  G+R  +GNG +IK
Subjt:  RKMHWRRWSDFYKPKESGALNFRDLEYFNQAMLAKQVWR-------------------------------------GFVWGLDLLKGGVRRNLGNGQSIK

Query:  IFTEPWIPCPTTFKVLMVKGQTNVEMRVAEFITPSFQWDVTKLSQFLCDEDVNVISHLPISR-PAPDKWIWHYDRKGKYTVKSGYKFRMLDQQASSTSSA
         F++PW+P PTTFK L       ++  VA FIT    WDVT +S   C+ED ++I  +PIS     D W+WHYD++G Y+V+SGYK  M  +  ++++S 
Subjt:  IFTEPWIPCPTTFKVLMVKGQTNVEMRVAEFITPSFQWDVTKLSQFLCDEDVNVISHLPISR-PAPDKWIWHYDRKGKYTVKSGYKFRMLDQQASSTSSA

Query:  EAESNWWKKLW
              W  +W
Subjt:  EAESNWWKKLW

XP_030483228.1 uncharacterized protein LOC115699823 [Cannabis sativa]1.4e-3238.07Show/hide
Query:  FSRDFEDGNRINRFWLGSDESKRKMHWRRWSDFYKPKESGALNFRDLEYFNQAMLAKQVWR----------------------GFVWGLDLLKGGVRRNL
        F R+ E  + ++ FW GS   K+K+HW++W  F K K  G L FR+  +F QA+LAKQ WR                      G  WG +LLK G+R  +
Subjt:  FSRDFEDGNRINRFWLGSDESKRKMHWRRWSDFYKPKESGALNFRDLEYFNQAMLAKQVWR----------------------GFVWGLDLLKGGVRRNL

Query:  GNGQSIKIFTEPWIPCPTTFKVLMVKGQTNVEMRVAEFITPSFQWDVTKLSQFLCDEDVNVISHLPIS-RPAPDKWIWHYDRKGKYTVKSGYKFRMLDQQ
        GNG  I   T+PWIP  + F  +   G  N    VAE+ITP  +W+++KLS      DV  I  LP+S   A D WIWH D  G+Y VKS Y F      
Subjt:  GNGQSIKIFTEPWIPCPTTFKVLMVKGQTNVEMRVAEFITPSFQWDVTKLSQFLCDEDVNVISHLPIS-RPAPDKWIWHYDRKGKYTVKSGYKFRMLDQQ

Query:  ASSTSSAEAESNWWKKLW
         +  S +   ++WWK  W
Subjt:  ASSTSSAEAESNWWKKLW

TrEMBL top hitse value%identityAlignment
A0A6J1BRN0 uncharacterized protein LOC1110047871.0e-3339.9Show/hide
Query:  RFWLGSDESKRKMHWRRWSDFYKPKESGALNFRDLEYFNQAMLAKQVWR-------------------------------------GFVWGLDLLKGGVR
        RFW GS    +K+HW  W     PKE G LNFRDLE FNQA++AKQVWR                                     GF+WG DLL  G+R
Subjt:  RFWLGSDESKRKMHWRRWSDFYKPKESGALNFRDLEYFNQAMLAKQVWR-------------------------------------GFVWGLDLLKGGVR

Query:  RNLGNGQSIKIFTEPWIPCPTTFKVLMVKGQTNVEMRVAEFITPSFQWDVTKLSQFLCDEDVNVISHLPIS-RPAPDKWIWHYDRKGKYTVKS
          +GNG +I IF++PWIP P +F+ +        +++VA+ I P+ QWDV  +S   C+ED ++I  +P+S   + D WIWH+D++G Y VKS
Subjt:  RNLGNGQSIKIFTEPWIPCPTTFKVLMVKGQTNVEMRVAEFITPSFQWDVTKLSQFLCDEDVNVISHLPIS-RPAPDKWIWHYDRKGKYTVKS

A0A6J1DX30 uncharacterized protein LOC1110248741.3e-3639.34Show/hide
Query:  RKMHWRRWSDFYKPKESGALNFRDLEYFNQAMLAKQVWR-------------------------------------GFVWGLDLLKGGVRRNLGNGQSIK
        RK+HW +W     PKE G LNFRDLE FNQA++AK VWR                                     GF+WG DLL  G+R  +GNG +IK
Subjt:  RKMHWRRWSDFYKPKESGALNFRDLEYFNQAMLAKQVWR-------------------------------------GFVWGLDLLKGGVRRNLGNGQSIK

Query:  IFTEPWIPCPTTFKVLMVKGQTNVEMRVAEFITPSFQWDVTKLSQFLCDEDVNVISHLPISR-PAPDKWIWHYDRKGKYTVKSGYKFRMLDQQASSTSSA
         F++PW+P PTTFK L       ++  VA FIT    WDVT +S   C+ED ++I  +PIS     D W+WHYD++G Y+V+SGYK  M  +  ++++S 
Subjt:  IFTEPWIPCPTTFKVLMVKGQTNVEMRVAEFITPSFQWDVTKLSQFLCDEDVNVISHLPISR-PAPDKWIWHYDRKGKYTVKSGYKFRMLDQQASSTSSA

Query:  EAESNWWKKLW
              W  +W
Subjt:  EAESNWWKKLW

A0A803NHG3 Uncharacterized protein3.9e-3335.29Show/hide
Query:  RFWLGSDESKRKMHWRRWSDFYKPKESGALNFRDLEYFNQAMLAKQ-------------------------------------VWRGFVWGLDLLKGGVR
        RFW GS   K+K+HW +W    +PKE G L FRDLE FNQA+LAKQ                                     VWR  VWG +++  G R
Subjt:  RFWLGSDESKRKMHWRRWSDFYKPKESGALNFRDLEYFNQAMLAKQ-------------------------------------VWRGFVWGLDLLKGGVR

Query:  RNLGNGQSIKIFTEPWIPCPTTFKVLMVKGQTNVEMRVAEFITPSFQWDVTKLSQFLCDEDVNVISHL-PISRPAPDKWIWHYDRKGKYTVKSGYKFRML
          +GNGQ +++  +PW+P PT+FKV   K     ++ V +   PS  WD + +      ED  +I  L P+     DK +WHY R G+YTV+SGY+    
Subjt:  RNLGNGQSIKIFTEPWIPCPTTFKVLMVKGQTNVEMRVAEFITPSFQWDVTKLSQFLCDEDVNVISHL-PISRPAPDKWIWHYDRKGKYTVKSGYKFRML

Query:  DQQASSTSSAEAESNWWKKLW
         +++ +T   +   +WW+KLW
Subjt:  DQQASSTSSAEAESNWWKKLW

A0A803Q0L5 Uncharacterized protein2.7e-3426.84Show/hide
Query:  RFWLGSDESKRKMHWRRWSDFYKPKESGALNFRDLEYFNQAMLAKQ-------------------------------------VWRGFVWGLDLLKGGVR
        RFW GS E  +K+HW +W+   KPK+ G L FRDL +FNQA+LAKQ                                     VWR  +WG  ++  G R
Subjt:  RFWLGSDESKRKMHWRRWSDFYKPKESGALNFRDLEYFNQAMLAKQ-------------------------------------VWRGFVWGLDLLKGGVR

Query:  RNLGNGQSIKIFTEPWIPCPTTFKVLMVKGQTNVEMRVAEFITPSFQWDVTKLSQFLCDEDVNVISHLPISR-PAPDKWIWHYDRKGKYTVKSGYKFRML
          +GNG+++++  +PW+P P TFK+   K      M VA+       WD   + +    +D  +I  +P +     DK +WHY + G+YTVKSGYK    
Subjt:  RNLGNGQSIKIFTEPWIPCPTTFKVLMVKGQTNVEMRVAEFITPSFQWDVTKLSQFLCDEDVNVISHLPISR-PAPDKWIWHYDRKGKYTVKSGYKFRML

Query:  DQQASSTSSAEAESNWWKKLW--------------------------------------------------------------NWSEGDLELICIGAWAI
          +    S+ +   +WWK LW                                                               W +G  E   +  W I
Subjt:  DQQASSTSSAEAESNWWKKLW--------------------------------------------------------------NWSEGDLELICIGAWAI

Query:  WTNRNYSIHNHPIPSINDKCSWIFKYLAEFRNSNVFSVPDRPMAADVQVLIGEGEDTIMHTVAAFDSINRKSGIGAVLRD
        W  RN  IH    P   +   W  KYL EF      +V  R    + +    E     ++  A   S    SGIG V+RD
Subjt:  WTNRNYSIHNHPIPSINDKCSWIFKYLAEFRNSNVFSVPDRPMAADVQVLIGEGEDTIMHTVAAFDSINRKSGIGAVLRD

A0A803QJV0 Uncharacterized protein1.4e-3335.75Show/hide
Query:  RFWLGSDESKRKMHWRRWSDFYKPKESGALNFRDLEYFNQAMLAKQ-------------------------------------VWRGFVWGLDLLKGGVR
        RFW GS   K+K+HW +W    +PKE G L FRDLE FNQA+LAKQ                                     VWR  VWG +++  G R
Subjt:  RFWLGSDESKRKMHWRRWSDFYKPKESGALNFRDLEYFNQAMLAKQ-------------------------------------VWRGFVWGLDLLKGGVR

Query:  RNLGNGQSIKIFTEPWIPCPTTFKVLMVKGQTNVEMRVAEFITPSFQWDVTKLSQFLCDEDVNVISHL-PISRPAPDKWIWHYDRKGKYTVKSGYKFRML
          +GNGQ +++  +PW+P PT+FKV   K     ++ V +   PS  WD + +      ED  +I  L P+     DK +WHY R G+YTV+SGY+    
Subjt:  RNLGNGQSIKIFTEPWIPCPTTFKVLMVKGQTNVEMRVAEFITPSFQWDVTKLSQFLCDEDVNVISHL-PISRPAPDKWIWHYDRKGKYTVKSGYKFRML

Query:  DQQASSTSSAEAESNWWKKLW
         +++ +TS  +   +WW KLW
Subjt:  DQQASSTSSAEAESNWWKKLW

SwissProt top hitse value%identityAlignment
P93295 Uncharacterized mitochondrial protein AtMg003105.0e-0931.67Show/hide
Query:  INRFWLGSDESKRKMHWRRWSDFYKPKE-SGALNFRDLEYFNQAMLAKQ-------------------------------------VWRGFVWGLDLLKG
        +  FW  S E+KRK+ W  W    K KE  G L FRDL +FNQA+LAKQ                                      WR  + G +LL  
Subjt:  INRFWLGSDESKRKMHWRRWSDFYKPKE-SGALNFRDLEYFNQAMLAKQ-------------------------------------VWRGFVWGLDLLKG

Query:  GVRRNLGNGQSIKIFTEPWI
        G+ R +G+G   K++ + WI
Subjt:  GVRRNLGNGQSIKIFTEPWI

Arabidopsis top hitse value%identityAlignment
AT3G09510.1 Ribonuclease H-like superfamily protein2.1e-1031.39Show/hide
Query:  FRDLEYFNQAMLAKQV--WRGFVWGLDLLKGGVRRNLGNGQSIKI------FTEPWIPCPT--TFKVLMVKGQTNVEMRVAEFITPSFQWDVTKLSQFLC
        F+D+   +  +  +Q   W   + G+ LLK G R  +G+GQ+I+I       + P  P  T  T+K + +    N+  R   +    + WD +K+SQF+ 
Subjt:  FRDLEYFNQAMLAKQV--WRGFVWGLDLLKGGVRRNLGNGQSIKI------FTEPWIPCPT--TFKVLMVKGQTNVEMRVAEFITPSFQWDVTKLSQFLC

Query:  DEDVNVISHLPISR-PAPDKWIWHYDRKGKYTVKSGY
          D   I  + +++   PDK IW+Y+  G+YTV+SGY
Subjt:  DEDVNVISHLPISR-PAPDKWIWHYDRKGKYTVKSGY

AT4G29090.1 Ribonuclease H-like superfamily protein8.2e-1525.11Show/hide
Query:  FWLGSDESKRKMHWRRWSDFYKPKESGALNFRDLEYFNQAMLAKQVWR--------------------------------GFVW-----GLDLLKGGVRR
        FW  + +  + MHW+ W      K  G + F+D+E FN A+L KQ+WR                                 FVW       ++L+ G R 
Subjt:  FWLGSDESKRKMHWRRWSDFYKPKESGALNFRDLEYFNQAMLAKQVWR--------------------------------GFVW-----GLDLLKGGVRR

Query:  NLGNGQSIKIFTEPWI---PCPTTFKVLMVKGQTNVE----MRVAEFITPS-FQWDVTKLSQFLCDEDVNVISHL-PISRPAPDKWIWHYDRKGKYTVKS
         +GNG+ I I+   W+   P     ++  V  Q        ++V++ I  S  +W    +     + +  +I  L P  R   D + W Y   G YTVKS
Subjt:  NLGNGQSIKIFTEPWI---PCPTTFKVLMVKGQTNVE----MRVAEFITPS-FQWDVTKLSQFLCDEDVNVISHL-PISRPAPDKWIWHYDRKGKYTVKS

Query:  GY--KFRMLDQQASSTSSAEAESN-WWKKLW
        GY    +++++++S    +E   N  ++K+W
Subjt:  GY--KFRMLDQQASSTSSAEAESN-WWKKLW

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein3.6e-1031.67Show/hide
Query:  INRFWLGSDESKRKMHWRRWSDFYKPKE-SGALNFRDLEYFNQAMLAKQ-------------------------------------VWRGFVWGLDLLKG
        +  FW  S E+KRK+ W  W    K KE  G L FRDL +FNQA+LAKQ                                      WR  + G +LL  
Subjt:  INRFWLGSDESKRKMHWRRWSDFYKPKE-SGALNFRDLEYFNQAMLAKQ-------------------------------------VWRGFVWGLDLLKG

Query:  GVRRNLGNGQSIKIFTEPWI
        G+ R +G+G   K++ + WI
Subjt:  GVRRNLGNGQSIKIFTEPWI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAACAATGAAGAAGGAGAGCAAGAACACACAGATGTAAAGTGGTTCGGCAACAAGGCCTACGTCCACTGTGATGAAGGGAGTTCCCTACATGCTTCAGGTGAACT
TTTCTCAAGGGACTTTGAAGATGGCAACCGGATAAACAGATTCTGGTTGGGGTCTGACGAGTCAAAACGAAAAATGCACTGGCGGAGATGGAGTGATTTTTATAAACCAA
AGGAATCAGGAGCCCTTAACTTTAGAGATCTGGAATACTTTAATCAGGCAATGCTTGCGAAACAAGTCTGGCGGGGTTTTGTTTGGGGATTGGATTTGCTAAAGGGGGGC
GTTCGACGGAATCTAGGGAATGGTCAATCGATCAAAATATTTACGGAGCCGTGGATTCCTTGCCCTACCACGTTTAAGGTGTTGATGGTTAAAGGTCAAACTAATGTGGA
AATGCGGGTGGCTGAGTTTATTACCCCATCTTTTCAGTGGGATGTTACAAAACTTAGTCAATTTTTGTGCGATGAAGATGTTAATGTGATTTCACACTTACCCATTAGTA
GGCCAGCCCCGGATAAATGGATATGGCATTACGACCGAAAGGGGAAATATACTGTGAAAAGTGGATACAAATTTCGTATGTTGGACCAACAAGCCTCTTCTACTTCTTCT
GCTGAGGCAGAGAGCAACTGGTGGAAGAAATTATGGAACTGGTCGGAAGGAGATTTGGAACTTATTTGCATTGGTGCCTGGGCAATTTGGACCAATAGAAATTATTCCAT
TCATAATCATCCTATTCCCAGTATCAATGATAAGTGCTCCTGGATTTTCAAATATCTTGCTGAATTTAGAAATTCCAATGTGTTTAGCGTTCCCGACCGACCTATGGCAG
CGGATGTTCAAGTCTTAATTGGGGAAGGAGAGGATACAATTATGCACACTGTTGCGGCTTTCGATTCAATTAATAGGAAGTCCGGTATTGGTGCCGTGCTCCGTGATAAG
TAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGAACAATGAAGAAGGAGAGCAAGAACACACAGATGTAAAGTGGTTCGGCAACAAGGCCTACGTCCACTGTGATGAAGGGAGTTCCCTACATGCTTCAGGTGAACT
TTTCTCAAGGGACTTTGAAGATGGCAACCGGATAAACAGATTCTGGTTGGGGTCTGACGAGTCAAAACGAAAAATGCACTGGCGGAGATGGAGTGATTTTTATAAACCAA
AGGAATCAGGAGCCCTTAACTTTAGAGATCTGGAATACTTTAATCAGGCAATGCTTGCGAAACAAGTCTGGCGGGGTTTTGTTTGGGGATTGGATTTGCTAAAGGGGGGC
GTTCGACGGAATCTAGGGAATGGTCAATCGATCAAAATATTTACGGAGCCGTGGATTCCTTGCCCTACCACGTTTAAGGTGTTGATGGTTAAAGGTCAAACTAATGTGGA
AATGCGGGTGGCTGAGTTTATTACCCCATCTTTTCAGTGGGATGTTACAAAACTTAGTCAATTTTTGTGCGATGAAGATGTTAATGTGATTTCACACTTACCCATTAGTA
GGCCAGCCCCGGATAAATGGATATGGCATTACGACCGAAAGGGGAAATATACTGTGAAAAGTGGATACAAATTTCGTATGTTGGACCAACAAGCCTCTTCTACTTCTTCT
GCTGAGGCAGAGAGCAACTGGTGGAAGAAATTATGGAACTGGTCGGAAGGAGATTTGGAACTTATTTGCATTGGTGCCTGGGCAATTTGGACCAATAGAAATTATTCCAT
TCATAATCATCCTATTCCCAGTATCAATGATAAGTGCTCCTGGATTTTCAAATATCTTGCTGAATTTAGAAATTCCAATGTGTTTAGCGTTCCCGACCGACCTATGGCAG
CGGATGTTCAAGTCTTAATTGGGGAAGGAGAGGATACAATTATGCACACTGTTGCGGCTTTCGATTCAATTAATAGGAAGTCCGGTATTGGTGCCGTGCTCCGTGATAAG
TAG
Protein sequenceShow/hide protein sequence
MKNNEEGEQEHTDVKWFGNKAYVHCDEGSSLHASGELFSRDFEDGNRINRFWLGSDESKRKMHWRRWSDFYKPKESGALNFRDLEYFNQAMLAKQVWRGFVWGLDLLKGG
VRRNLGNGQSIKIFTEPWIPCPTTFKVLMVKGQTNVEMRVAEFITPSFQWDVTKLSQFLCDEDVNVISHLPISRPAPDKWIWHYDRKGKYTVKSGYKFRMLDQQASSTSS
AEAESNWWKKLWNWSEGDLELICIGAWAIWTNRNYSIHNHPIPSINDKCSWIFKYLAEFRNSNVFSVPDRPMAADVQVLIGEGEDTIMHTVAAFDSINRKSGIGAVLRDK